Clone BS09830 Report

Search the DGRC for BS09830

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:98
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG15445-RA
Protein status:BS09830.pep: full length peptide match
Sequenced Size:1889

Clone Sequence Records

BS09830.complete Sequence

1889 bp assembled on 2009-12-07

GenBank Submission: KX803048

> BS09830.complete
GAAGTTATCAGTCGACATGTCACAAAACGACAACCTACTCATCCAGATCC
GCGCCCTTCTCCAGTCCGATGGCGAGAAGCTGTGGGAGGAGCCCTACTAC
TCCGAAGATCTTGGTAGCATCGAGGGAGCACTAGAAAACCTGGCGCAGAA
GTACTCCGGCATGTTGGGCATCGATATAGGTCGCTGCAAGTTCTTTTTGA
CCGAGCTGCAGGAAAATGCTCTCCGTACGCTGGCCGCCCGACGTGAGTTC
AGCACCACAGGAATTGCCACGTTGAAGGTTCGCCGCGTTGGCGAGCACAG
CGGTGCCACAATGGTGGAAGTGAAGTGCAGCTTGGACATCGTGGGCTCCG
AACTCCAGGCATGCATAGCGAAGAAACTGGAAGTGCCGAATGCTGCGCAC
GTCAAGTGCATCGCTGCCGGCAAAGTGGTGTCCGCCAATGCCACTTTGGC
CGACCAGCAGTTGAAGAACAACCAGCAGTTGATTGTCATTGTGGGCGATG
GGGATAATTCTGGCGAAGCCCTGTACGAAAGGATCAATCGCATCAAGGCC
GATGTGGAGGCGGTGGTGTCCTCGAAGAATAACCTAATAGAGATGGAGGA
TCAGAATGGCAGCCAAGTGTATTTGCCGCCTTCCGAGCATAAAGCCCTGC
TCATGGGTTTGGGATTCTGTGAGAAGGCCCGTGCGGCCATGAATCGCAAG
CATTTTGAGGAGGCTCTGCTCCTGCTTTTGGAGGCCGACGAGCATTTTTC
TACCTGTGGCTCAAAGTTTCTAGAGTCCGTGGATAACTATGCTTTGCTGA
ACCTCGACATAGTGTGGTGCTATTTTTGCCTGAAGAACGTTACCCAGCTC
CCGGATGCTGAGCATCGCTTGGCCCGCTGCAGTCGCAATTTCGGCATCAG
CTATGGCGACAATTTGGAGAGGCTGTACTCCTTGAAGGGCAAGGACTGTC
CCGAGAGGGCTTTAATTATGCGGCTTAAGTTGCTCCAGGGCGTGATCTTC
TTCCACCAGAATCTTCGCAATCAGGCATTTGAGTGCTTCGAAGCGGCTAA
AACTCTGCTAAATGAACTAAAGATCAACAACGACCAACTGGCTCTCCTGG
TCGATATGGGCTTCGAGCCCTCCGAGGCTCGTATGGCCCTGCGCTCCTGC
AAGGGCGGCACCGCCGTCGAACAGGCTGTTCAGTTTATTCACGAGCGTCG
TCAGCAGCTCAAGAATGCACGCATGAAATATAAAGCGTCCGAGCGTGCTA
TGGAGCGCCGCCTGAAGCGCTCCAATTCCAAAGATTGCACCTGGGTGAAT
CCCCGCAGTGTCTGCAGCCTTGCTGACATGGGATTCGAGAGCGGACTGGC
CACTATCGCCTTGCAGCGCTCTAATAATGATATCCTCCAAGCGGTGGAAC
TGCTGCAGACAGAATCGGACGAACTTACTGGTGCTTCGCCATGGTTTCCG
GTCACCGTAGACACGACCAAACTGGCTCAGCTTCTGCAACTGGGATTCAA
CGAGAACGACTCGCGCGTGGCCCTACAGAATGCATCAAATAACATGGAAG
AGGCCATCGAGAGTCTGATGTGCGCCATAGAGAGCGAGGAGGAGCTGAAA
GCGATTTTAAAGCACGTTGGGCGTTTGGCCGAAAATGGTGGGCAAAATCT
TGACGGCCCCTCTACTTCGAACGCCTCCGGGCAGACGCAAGTTGCTTTGC
CAGCGCCCATTATCGAAGCTGTTATCAATCATGCTCGCGTCGAGATTGAA
ACGTACAAGGCCTACGAGCGCTTTAACTCCGACCTCAAACTGAGCGACCT
GGAATACCTGGACTTGCCACTTATCCAGGAGGAGAAGATCCTGACTGAGT
ATTTCAATATGCTGCAGCAGTAGAAGCATTCTAGACCAT

BS09830.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:09:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG15445-RH 1857 CG15445-PH 1..1857 17..1873 9285 100 Plus
CG15445-RG 1857 CG15445-PG 1..1857 17..1873 9285 100 Plus
CG15445-RF 1857 CG15445-PF 1..1857 17..1873 9285 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:09:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15445-RH 2215 CG15445-RH 284..2140 17..1873 9285 100 Plus
CG15445-RG 2216 CG15445-RG 285..2141 17..1873 9285 100 Plus
CG15445-RF 2320 CG15445-RF 278..2134 17..1873 9285 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:09:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21118860..21119664 591..1395 4025 100 Plus
X 23542271 X 21119778..21120258 1393..1873 2405 100 Plus
X 23542271 X 21118316..21118771 137..592 2280 100 Plus
X 23542271 X 21117496..21117615 17..136 600 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:09:54 has no hits.

BS09830.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:46:22 Download gff for BS09830.complete
Subject Subject Range Query Range Percent Splice Strand
CG15445-RD 291..2147 17..1873 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:34 Download gff for BS09830.complete
Subject Subject Range Query Range Percent Splice Strand
CG15445-RF 278..2134 17..1873 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:21:20 Download gff for BS09830.complete
Subject Subject Range Query Range Percent Splice Strand
CG15445-RD 291..2147 17..1873 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:21 Download gff for BS09830.complete
Subject Subject Range Query Range Percent Splice Strand
CG15445-RF 278..2134 17..1873 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:21 Download gff for BS09830.complete
Subject Subject Range Query Range Percent Splice Strand
X 21117496..21117615 17..136 100 -> Plus
X 21118316..21118771 137..592 100 -> Plus
X 21118862..21119662 593..1393 100 -> Plus
X 21119779..21120258 1394..1873 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:34 Download gff for BS09830.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20988523..20988642 17..136 100 -> Plus
arm_X 20989343..20989798 137..592 100 -> Plus
arm_X 20989889..20990689 593..1393 100 -> Plus
arm_X 20990806..20991285 1394..1873 100   Plus

BS09830.3prime Sequence

888 bp (832 high quality bases) assembled on 2006-04-19

> BS09830.3prime
ATGGTCTAGAATGCTTCTACTGCTGCAGCATATTGAAATACTCAGTCAGG
ATCTTCTCCTCCTGGATAAGTGGCAAGTCCAGGTATTCCAGGTCGCTCAG
TTTGAGGTCGGAGTTAAAGCGCTCGTAGGCCTTGTACGTTTCAATCTCGA
CGCGAGCATGATTGATAACAGCTTCGATAATGGGCGCTGGCAAAGCAACT
TGCGTCTGCCCGGAGGCGTTCGAAGTAGAGGGGCCGTCAAGATTTTGCCC
ACCATTTTCGGCCAAACGCCCAACGTGCTTTAAAATCGCTTTCAGCTCCT
CCTCGCTCTCTATGGCGCACATCAGACTCTCGATGGCCTCTTCCATGTTA
TTTGATGCATTCTGTAGGGCCACGCGCGAGTCGTTCTCGTTGAATCCCAG
TTGCAGAAGCTGAGCCAGTTTGGTCGTGTCTACGGTGACCGGAAACCATG
GCGAAGCACCAGTAAGTTCGTCCGATTCTGTCTGCAGCAGTTCCACCGCT
TGGAGGATATCATTATTAGAGCGCTGCAAGGCGATAGTGGCCAGTCCGCT
CTCGAATCCCATGTCAGCAAGGCTGCAGACACTGCGGGGATTCACCCAGG
TGCAATCTTTGGAATTGGAGCGCTTCAGGCGGCGCTCCATAGCACGCTCG
GACGCTTTATATTTCATGCGTGCATTCTTGAGCTGCTGACGACGCTCGTG
AATAAACTGAACAGCCTGTTCGACGGCGGTGCCGCCCTTGCAGGAGCGCA
GGGCCATACGAGCCTCGGAGGGCTCGAAGCCCATATCGACCAGGAGAGCC
AGTTGGTCGTTGTTGATCTTTAGTTCATTTAGCAGAGTTTTAGCCGCTTC
GAAGCACTCAAATGCCTGATTGCGAAGATTCTGGTGGA

BS09830.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:35:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG15445-PA 1857 CG15445-RA 986..1857 888..17 4360 100 Minus
CG15445-PD 1941 CG15445-RD 1070..1941 888..17 4360 100 Minus
CG15445-PC 1740 CG15445-RC 986..1459 888..415 2370 100 Minus
CG15445-PB 1824 CG15445-RB 1070..1543 888..415 2370 100 Minus
CG15445-PC 1740 CG15445-RC 1458..1740 299..17 1415 100 Minus
CG15445-PB 1824 CG15445-RB 1542..1824 299..17 1415 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:57:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG15445-RH 2215 CG15445-RH 1269..2140 888..17 4360 100 Minus
CG15445-RG 2216 CG15445-RG 1270..2141 888..17 4360 100 Minus
CG15445-RF 2320 CG15445-RF 1263..2134 888..17 4360 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 09:57:24
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21119778..21120258 497..17 2405 100 Minus
X 23542271 X 21119271..21119664 888..495 1970 100 Minus
Blast to na_te.dros performed on 2015-02-01 09:57:28 has no hits.

BS09830.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:21:03 Download gff for BS09830.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15445-PD 1071..1941 17..887 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:34:57 Download gff for BS09830.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15445-PD 1071..1941 17..887 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:22:47 Download gff for BS09830.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15445-RF 1264..2137 10..887 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:00:27 Download gff for BS09830.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15445-RF 1264..2137 10..887 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:00:27 Download gff for BS09830.3prime
Subject Subject Range Query Range Percent Splice Strand
X 21119272..21119662 497..887 100 -> Minus
X 21119779..21120261 10..496 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:22:47 Download gff for BS09830.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 20990299..20990689 497..887 100 -> Minus
arm_X 20990806..20991288 10..496 99   Minus

BS09830.5prime Sequence

917 bp (907 high quality bases) assembled on 2006-04-19

> BS09830.5prime
GAAGTTATCAGTCGACATGTCACAAAACGACAACCTACTCATCCAGATCC
GCGCCCTTCTCCAGTCCGATGGCGAGAAGCTGTGGGAGGAGCCCTACTAC
TCCGAAGATCTTGGTAGCATCGAGGGAGCACTAGAAAACCTGGCGCAGAA
GTACTCCGGCATGTTGGGCATCGATATAGGTCGCTGCAAGTTCTTTTTGA
CCGAGCTGCAGGAAAATGCTCTCCGTACGCTGGCCGCCCGACGTGAGTTC
AGCACCACAGGAATTGCCACGTTGAAGGTTCGCCGCGTTGGCGAGCACAG
CGGTGCCACAATGGTGGAAGTGAAGTGCAGCTTGGACATCGTGGGCTCCG
AACTCCAGGCATGCATAGCGAAGAAACTGGAAGTGCCGAATGCTGCGCAC
GTCAAGTGCATCGCTGCCGGCAAAGTGGTGTCCGCCAATGCCACTTTGGC
CGACCAGCAGTTGAAGAACAACCAGCAGTTGATTGTCATTGTGGGCGATG
GGGATAATTCTGGCGAAGCCCTGTACGAAAGGATCAATCGCATCAAGGCC
GATGTGGAGGCGGTGGTGTCCTCGAAGAATAACCTAATAGAGATGGAGGA
TCAGAATGGCAGCCAAGTGTATTTGCCGCCTTCCGAGCATAAAGCCCTGC
TCATGGGTTTGGGATTCTGTGAGAAGGCCCGTGCGGCCATGAATCGCAAG
CATTTTGAGGAGGCTCTGCTCCTGCTTTTGGAGGCCGACGAGCATTTTTC
TACCTGTGGCTCANAGTTTCTAGAGTCCGTGGATAACTATGCTTTGCTGA
ACCTCGACATAGTGTGGTGCTATTTTTGCCTGAAGAACGTTACCCAGCTC
CCGGATGCTGAGCATCGCTTGGCCCGCTGCAGTCGCAATTTCGGCATCAG
CTATGGCGACNATTTGG

BS09830.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:35:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG15445-PC 1740 CG15445-RC 1..901 17..917 4467 99.7 Plus
CG15445-PA 1857 CG15445-RA 1..901 17..917 4467 99.7 Plus
CG15445-PB 1824 CG15445-RB 85..985 17..917 4467 99.7 Plus
CG15445-PD 1941 CG15445-RD 85..985 17..917 4467 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:24:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG15445-RH 2215 CG15445-RH 284..1184 17..917 4483 99.8 Plus
CG15445-RG 2216 CG15445-RG 285..1185 17..917 4483 99.8 Plus
CG15445-RF 2320 CG15445-RF 278..1178 17..917 4483 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:24:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21118316..21118771 137..592 2280 100 Plus
X 23542271 X 21118860..21119186 591..917 1613 99.4 Plus
X 23542271 X 21117496..21117615 17..136 600 100 Plus
Blast to na_te.dros performed on 2015-02-13 00:24:05 has no hits.

BS09830.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:21:05 Download gff for BS09830.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15445-PB 69..985 1..917 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:34:58 Download gff for BS09830.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15445-PD 69..985 1..917 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:58:35 Download gff for BS09830.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15445-RF 262..1178 1..917 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:45:27 Download gff for BS09830.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15445-RF 262..1178 1..917 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:45:27 Download gff for BS09830.5prime
Subject Subject Range Query Range Percent Splice Strand
X 21117480..21117615 1..136 96 -> Plus
X 21118316..21118771 137..592 100 -> Plus
X 21118862..21119186 593..917 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:58:35 Download gff for BS09830.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 20988507..20988642 1..136 96 -> Plus
arm_X 20989343..20989798 137..592 100 -> Plus
arm_X 20989889..20990213 593..917 99   Plus

BS09830.pep Sequence

Translation from 16 to 1872

> BS09830.pep
MSQNDNLLIQIRALLQSDGEKLWEEPYYSEDLGSIEGALENLAQKYSGML
GIDIGRCKFFLTELQENALRTLAARREFSTTGIATLKVRRVGEHSGATMV
EVKCSLDIVGSELQACIAKKLEVPNAAHVKCIAAGKVVSANATLADQQLK
NNQQLIVIVGDGDNSGEALYERINRIKADVEAVVSSKNNLIEMEDQNGSQ
VYLPPSEHKALLMGLGFCEKARAAMNRKHFEEALLLLLEADEHFSTCGSK
FLESVDNYALLNLDIVWCYFCLKNVTQLPDAEHRLARCSRNFGISYGDNL
ERLYSLKGKDCPERALIMRLKLLQGVIFFHQNLRNQAFECFEAAKTLLNE
LKINNDQLALLVDMGFEPSEARMALRSCKGGTAVEQAVQFIHERRQQLKN
ARMKYKASERAMERRLKRSNSKDCTWVNPRSVCSLADMGFESGLATIALQ
RSNNDILQAVELLQTESDELTGASPWFPVTVDTTKLAQLLQLGFNENDSR
VALQNASNNMEEAIESLMCAIESEEELKAILKHVGRLAENGGQNLDGPST
SNASGQTQVALPAPIIEAVINHARVEIETYKAYERFNSDLKLSDLEYLDL
PLIQEEKILTEYFNMLQQ*

BS09830.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:10:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG15445-PH 618 CG15445-PH 1..618 1..618 3138 100 Plus
CG15445-PG 618 CG15445-PG 1..618 1..618 3138 100 Plus
CG15445-PF 618 CG15445-PF 1..618 1..618 3138 100 Plus
CG15445-PE 618 CG15445-PE 1..618 1..618 3138 100 Plus
CG15445-PA 618 CG15445-PA 1..618 1..618 3138 100 Plus