Clone BS09951 Report

Search the DGRC for BS09951

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:99
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG5745-RA
Protein status:BS09951.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS09951.3prime Sequence

876 bp (776 high quality bases) assembled on 2006-04-19

> BS09951.3prime
ATGGTCTAGAAAGCTTTCAACTCTTCGTCTCCAAATGCTTGGGCGCATCC
GCATACGTGAACTTCAGGCGGAATGCCTCGGCCAGCAGAACGTTGATTTG
TCGATCGGACCAGTTGTGTGTTGGCAGATTTTGTAGCAGCAACATGAGGC
CCTGGAAATCGTTTTGTTGCATCAGCTGCTCCTTCCAGTGCAGAAGGAAT
GCCGCGCACACGTACAAGTGGAACAGGGCAAAGCCGTCAGACTCTGCGAG
ATATGTGTCCCACAATCGGATGGTGCAGTGCAGCGGCAGCTCGCGTGTCA
GCAGATTGTTCATCCAGCGAAATGAGAATTGCAAGTAGTCGACGCCATGT
GCCTGTAGATGACGATGTAAGTTCACGTCAATGCGCTGTATCAGATCCTT
GAGTTGGTTAACCTTCTCCTGTATGCCCAGCTGGGCAAAGATGTAGTTAT
CCTGAATGCAGTCGAGAAACTTAGATAAGCACCAAAACGAGTCCGCCTCG
ATAATGTTTCGAGTCTCCTCGGGCAGCGTGGACATGTCGTACTTTTCGAG
ATCCGTATTCGGCGTCAAGGCCTCCTGTAGAAAGACGATAAAGAAGGGCG
TGACCAGGTCGTTGATGCCTTGCACGTAGCCGGAGGCAGGATGGCGAATG
GCCCAGATAAAGAGTATGCGCTCGAACATCTCCTGGACAAGCTGCTGCTG
GAAGAGCGGAATCTGGGGGTTCATTCGTGGCACATCGATGTGGATCTGGC
GGTATGTGTCCTGTTGCGTCTCATCCTGGCTATCCACCCGGAAGTAGTTG
TGCCTGAGGTCCTGGTAGCCCTGCCGCTTGCTCTCTAGCACCGCCATCCT
TCGCTCACTTGAAGGCGGAAGATACT

BS09951.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:38:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG5745-PA 1641 CG5745-RA 782..1641 876..17 4300 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:24:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG5745-RA 1816 CG5745-RA 860..1719 876..17 4300 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:24:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21103675..21104175 876..376 2505 100 Minus
3R 32079331 3R 21104585..21104810 376..151 1130 100 Minus
3R 32079331 3R 21104880..21105016 153..17 685 100 Minus
Blast to na_te.dros performed on 2015-02-10 21:24:10 has no hits.

BS09951.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:24:44 Download gff for BS09951.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5745-PA 782..1641 17..876 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:39:59 Download gff for BS09951.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5745-PA 782..1641 17..876 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:48:57 Download gff for BS09951.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5745-RA 860..1719 17..876 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:52:27 Download gff for BS09951.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5745-RA 860..1719 17..876 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:52:27 Download gff for BS09951.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 21103675..21104175 376..876 100 -> Minus
3R 21104586..21104809 152..375 100 -> Minus
3R 21104882..21105016 17..151 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:48:57 Download gff for BS09951.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16929397..16929897 376..876 100 -> Minus
arm_3R 16930308..16930531 152..375 100 -> Minus
arm_3R 16930604..16930738 17..151 100   Minus

BS09951.5prime Sequence

895 bp (822 high quality bases) assembled on 2006-04-19

> BS09951.5prime
GAAGTTATCAGTCGACATGATGGATAACAATGTAGAGCAATTAGCAGGAA
AGAGCCAAACTGAAACAGCCGAGTCCACAGCAGCAGCAACAGGAACAGCA
GGAGCAGGTGTAGCAGTAGTAACCGTGGCAAGTGGAGCCGGACCAACGCC
CGGCGCAAACTCCTCGACCTTTTGGAAAAACAGCGGACGTCGAGTGCCCG
GACGACCCAGTCCCAAGCGGGAGCTCGAGAAGGCGGCGGCAGTTGGGGTA
GCGGTCGGTCGCGGCGCTGCCCCCGGATCTGGCATGGTGTCCACCTTCAC
CGAGTACCAGAAGTCGGTGAGCGATGCCTGGGACATGGGTGACGACGAGT
TCTGCATCATCAGCAGCACGGAGGCGGCTGCCGCGGCCGTTGGAGCTGGC
GATGCGGCTCATTTCTCCCGGCAAGTGTCGCAGACGGTGGCTCTCAACGT
GATCGAGACGCACTCTCGAAGCAACCAGAACCATAATGCATCCCGGTCAG
CAAACGAAAGTGGCGCAGATTTGGTCCCAGTCAGCAGTAGCTCGACGGAC
GACTGCAAGGAAGACCGTAGATCTCTGCCGGACAGTAATGAAAACAGATC
TAGATTGAGGAACTACCCGGGCAGACCGCAATTGCAGAAGATCAGCTCGA
ATTGCCAGGACAGCGAGTACGAGACGAAAATTGAAAAATTCCAAGTGGTG
CTAGACTCGCCTCAACTGGACTTGGTGGCCCTCAAGAAGATCAGCTGGTC
TGGCGTGCCTCGGAAGATGCGCGCTGTCAGCTGGCGACTCCTTTCGAAGT
ATCTTCCGCCTTCAAGTGAGCGAAGGATGGCGGTGCTAGAGAGCAAGCGG
CAGGGCTACCAGGACCTCAGGGCACACTACTTCCGGGTGGATAGC

BS09951.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:38:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG5745-PA 1641 CG5745-RA 1..855 17..871 4275 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:25:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG5745-RA 1816 CG5745-RA 79..957 17..895 4350 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:25:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21102277..21102661 17..401 1925 100 Plus
3R 32079331 3R 21102722..21102918 401..597 985 100 Plus
3R 32079331 3R 21103419..21103590 595..766 860 100 Plus
3R 32079331 3R 21103642..21103772 765..895 595 96.9 Plus
Blast to na_te.dros performed 2015-02-12 13:25:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6738..6884 43..184 209 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2391 62..147 178 67.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6834 43..157 172 62.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2785..2912 58..186 166 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6804..6966 36..193 163 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6714..6787 58..131 154 67.6 Plus
roo 9092 roo DM_ROO 9092bp 1060..1151 56..147 154 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6759..6864 43..145 153 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2300..2424 18..147 152 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6795..6856 64..125 148 71 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6810..6896 58..147 137 63.3 Plus
roo 9092 roo DM_ROO 9092bp 1070..1143 57..130 136 64.9 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3267..3335 45..119 119 65.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2785..2899 43..157 116 59.3 Plus
roo 9092 roo DM_ROO 9092bp 1089..1152 43..106 112 67.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1538..1586 59..107 110 69.4 Plus

BS09951.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:24:46 Download gff for BS09951.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5745-PA 1..879 17..895 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:40:01 Download gff for BS09951.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5745-PA 1..879 17..895 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:26:42 Download gff for BS09951.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5745-RA 76..957 13..895 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:18:03 Download gff for BS09951.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5745-RA 76..957 13..895 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 17:18:03 Download gff for BS09951.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 21102274..21102661 13..401 99 -> Plus
3R 21102723..21102918 402..597 100 -> Plus
3R 21103422..21103590 598..766 100 -> Plus
3R 21103644..21103772 767..895 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:26:42 Download gff for BS09951.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16927996..16928383 13..401 99 -> Plus
arm_3R 16928445..16928640 402..597 100 -> Plus
arm_3R 16929144..16929312 598..766 100 -> Plus
arm_3R 16929366..16929494 767..895 98   Plus

BS09951.complete Sequence

1673 bp (1673 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ636511

> BS09951.complete
GAAGTTATCAGTCGACATGATGGATAACAATGTAGAGCAATTAGCAGGAA
AGAGCCAAACTGAAACAGCCGAGTCCACAGCAGCAGCAACAGGAACAGCA
GGAGCAGGTGTAGCAGTAGTAACCGTGGCAAGTGGAGCCGGACCAACGCC
CGGCGCAAACTCCTCGACCTTTTGGAAAAACAGCGGACGTCGAGTGCCCG
GACGACCCAGTCCCAAGCGGGAGCTCGAGAAGGCGGCGGCAGTTGGGGTA
GCGGTCGGTCGCGGCGCTGCCCCCGGATCTGGCATGGTGTCCACCTTCAC
CGAGTACCAGAAGTCGGTGAGCGATGCCTGGGACATGGGTGACGACGAGT
TCTGCATCATCAGCAGCACGGAGGCGGCTGCCGCGGCCGTTGGAGCTGGC
GATGCGGCTCATTTCTCCCGGCAAGTGTCGCAGACGGTGGCTCTCAACGT
GATCGAGACGCACTCTCGAAGCAACCAGAACCATAATGCATCCCGGTCAG
CAAACGAAAGTGGCGCAGATTTGGTCCCAGTCAGCAGTAGCTCGACGGAC
GACTGCAAGGAAGACCGTAGATCTCTGCCGGACAGTAATGAAAACAGATC
TAGATTGAGGAACTACCCGGGCAGACCGCAATTGCAGAAGATCAGCTCGA
ATTGCCAGGACAGCGAGTACGAGACGAAAATTGAAAAATTCCAAGTGGTG
CTAGACTCGCCTCAACTGGACTTGGTGGCCCTCAAGAAGATCAGCTGGTC
TGGCGTGCCTCGGAAGATGCGCGCTGTCAGCTGGCGACTCCTTTCGAAGT
ATCTTCCGCCTTCAAGTGAGCGAAGGATGGCGGTGCTAGAGAGCAAGCGG
CAGGGCTACCAGGACCTCAGGCACAACTACTTCCGGGTGGATAGCCAGGA
TGAGACGCAACAGGACACATACCGCCAGATCCACATCGATGTGCCACGAA
TGAACCCCCAGATTCCGCTCTTCCAGCAGCAGCTTGTCCAGGAGATGTTC
GAGCGCATACTCTTTATCTGGGCCATTCGCCATCCTGCCTCCGGCTACGT
GCAAGGCATCAACGACCTGGTCACGCCCTTCTTTATCGTCTTTCTACAGG
AGGCCTTGACGCCGAATACGGATCTCGAAAAGTACGACATGTCCACGCTG
CCCGAGGAGACTCGAAACATTATCGAGGCGGACTCGTTTTGGTGCTTATC
TAAGTTTCTCGACTGCATTCAGGATAACTACATCTTTGCCCAGCTGGGCA
TACAGGAGAAGGTTAACCAACTCAAGGATCTGATACAGCGCATTGACGTG
AACTTACATCGTCATCTACAGGCACATGGCGTCGACTACTTGCAATTCTC
ATTTCGCTGGATGAACAATCTGCTGACACGCGAGCTGCCGCTGCACTGCA
CCATCCGATTGTGGGACACATATCTCGCAGAGTCTGACGGCTTTGCCCTG
TTCCACTTGTACGTGTGCGCGGCATTCCTTCTGCACTGGAAGGAGCAGCT
GATGCAACAAAACGATTTCCAGGGCCTCATGTTGCTGCTACAAAATCTGC
CAACACACAACTGGTCCGATCGACAAATCAACGTTCTGCTGGCCGAGGCA
TTCCGCCTGAAGTTCACGTATGCGGATGCGCCCAAGCATTTGGAGACGAA
GAGTTGAAAGCTTTCTAGACCAT

BS09951.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG5745-RA 1641 CG5745-PA 1..1641 17..1657 8205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:06:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG5745-RA 1816 CG5745-RA 79..1719 17..1657 8205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:06:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21103642..21104175 765..1298 2670 100 Plus
3R 32079331 3R 21102277..21102661 17..401 1925 100 Plus
3R 32079331 3R 21104585..21104810 1298..1523 1130 100 Plus
3R 32079331 3R 21102722..21102918 401..597 985 100 Plus
3R 32079331 3R 21103419..21103590 595..766 860 100 Plus
3R 32079331 3R 21104880..21105016 1521..1657 685 100 Plus
Blast to na_te.dros performed 2014-11-27 11:06:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6738..6884 43..184 209 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2391 62..147 178 67.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6834 43..157 172 62.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2785..2912 58..186 166 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6804..6966 36..193 163 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6714..6787 58..131 154 67.6 Plus
roo 9092 roo DM_ROO 9092bp 1060..1151 56..147 154 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6759..6864 43..145 153 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2300..2424 18..147 152 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6795..6856 64..125 148 71 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6810..6896 58..147 137 63.3 Plus
roo 9092 roo DM_ROO 9092bp 1070..1143 57..130 136 64.9 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3267..3335 45..119 119 65.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2785..2899 43..157 116 59.3 Plus

BS09951.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:38:52 Download gff for BS09951.complete
Subject Subject Range Query Range Percent Splice Strand
CG5745-RA 1..1641 17..1657 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:24:41 Download gff for BS09951.complete
Subject Subject Range Query Range Percent Splice Strand
CG5745-RA 61..1704 13..1657 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:20:17 Download gff for BS09951.complete
Subject Subject Range Query Range Percent Splice Strand
CG5745-RA 79..1718 17..1656 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:38:52 Download gff for BS09951.complete
Subject Subject Range Query Range Percent Splice Strand
CG5745-RA 61..1704 13..1657 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:38:59 Download gff for BS09951.complete
Subject Subject Range Query Range Percent Splice Strand
CG5745-RA 79..1718 17..1656 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:38:59 Download gff for BS09951.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21104882..21105015 1523..1656 100   Plus
3R 21102277..21102661 17..401 100 -> Plus
3R 21102723..21102918 402..597 100 -> Plus
3R 21103422..21103590 598..766 100 -> Plus
3R 21103644..21104175 767..1298 100 -> Plus
3R 21104586..21104809 1299..1522 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:20:17 Download gff for BS09951.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16927999..16928383 17..401 100 -> Plus
arm_3R 16928445..16928640 402..597 100 -> Plus
arm_3R 16929144..16929312 598..766 100 -> Plus
arm_3R 16929366..16929897 767..1298 100 -> Plus
arm_3R 16930308..16930531 1299..1522 100 -> Plus
arm_3R 16930604..16930737 1523..1656 100   Plus

BS09951.pep Sequence

Translation from 16 to 1656

> BS09951.pep
MMDNNVEQLAGKSQTETAESTAAATGTAGAGVAVVTVASGAGPTPGANSS
TFWKNSGRRVPGRPSPKRELEKAAAVGVAVGRGAAPGSGMVSTFTEYQKS
VSDAWDMGDDEFCIISSTEAAAAAVGAGDAAHFSRQVSQTVALNVIETHS
RSNQNHNASRSANESGADLVPVSSSSTDDCKEDRRSLPDSNENRSRLRNY
PGRPQLQKISSNCQDSEYETKIEKFQVVLDSPQLDLVALKKISWSGVPRK
MRAVSWRLLSKYLPPSSERRMAVLESKRQGYQDLRHNYFRVDSQDETQQD
TYRQIHIDVPRMNPQIPLFQQQLVQEMFERILFIWAIRHPASGYVQGIND
LVTPFFIVFLQEALTPNTDLEKYDMSTLPEETRNIIEADSFWCLSKFLDC
IQDNYIFAQLGIQEKVNQLKDLIQRIDVNLHRHLQAHGVDYLQFSFRWMN
NLLTRELPLHCTIRLWDTYLAESDGFALFHLYVCAAFLLHWKEQLMQQND
FQGLMLLLQNLPTHNWSDRQINVLLAEAFRLKFTYADAPKHLETKS*

BS09951.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG5745-PA 546 CG5745-PA 1..546 1..546 2843 100 Plus
GAPsec-PA 403 CG5978-PA 210..399 321..528 248 31.5 Plus
CG8449-PA 654 CG8449-PA 17..382 194..509 243 24.3 Plus
Tbc1d15-17-PC 715 CG11490-PC 274..576 157..467 183 22.1 Plus
Tbc1d15-17-PB 715 CG11490-PB 274..576 157..467 183 22.1 Plus