Clone Sequence Records
BS10059.3prime Sequence
918 bp (900 high quality bases) assembled on 2006-04-19
> BS10059.3prime
ATGGTCTAGAAAGCTTTTAAAGGACTTCTTCCCGCGCCACATACGACAGC
ATAAACTCGATTTTGCGAACCAGTTGCGCCAGTTTGGTGCGATCCAATTG
CACACTTCCGCTGGCCAAAGCGAACAGCTTCTGGAACTCGGCTTCCTGGG
TATTCTTACGGCGACTGATTGCCTTCGTCTGCTGCAGCAGATAGAGAACA
TCACTAAGGGCGGCCAACTTGTGCTCCTTCGTAGCCATCAACTGGCGGGC
ATCCTGCTGCAGCTGCTCCCTGTTGTCGACGAGGAAATTGGCACCTCCTG
CAGCACTTCCAACTGCAGCCGCGCCGGCAGGACCATTACCCGTGGTGATG
GCTTCCATCTCTACGGAGACAATAGCGTCCTCAGCATCCTCGAAGTTGGT
GCCGTACTTTAAGGTGGCGCTGAGATTGACAAGGTGGGCCACTGCCTCGC
TGGCATTGGTCCTCTGTTCGCCGCCAAAGAAACGAGCCACACAGGCGTAG
GCGCTTAGTATGTTCCACAAATTGTAGTGCAGGCACGGAGACGGAGTTTT
CTTGCATATATCGGAGAATTTGGCAATGCTCCCGAAAATTTCGGGAACAC
GGCTCTCTTTCTTGGCAGCTTCTTCGGGTGTAGGTATAATCACAATCTTA
GAGTTCTTCGGCTTGATCCACCAGGGCTTGTAGTCTGGCATAAGCTTCAT
GATATCTCCATTGGTGATCAATTTCTGGAACTCATCTTGCTCCTCTGTAG
TTAACCGGCTCCAAACTTCATCCGCATCGTTGATATCAACGCCTTTCAGT
CGAGTTGCAATGTCTTCCTCCAGGTCTTCATCCAGTATGTCCCCCTCGGT
GACGTTTTCTTCCGCCTCATCTTCTTCTGACTCTCCTTCCTCGCCTCCAT
CCGAGTCCAAACTATTTT
BS10059.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:40:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-PA | 987 | CG31223-RA | 86..987 | 918..17 | 4510 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:59:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-RA | 1270 | CG31223-RA | 345..1246 | 918..17 | 4510 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:59:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20831530..20832431 | 918..17 | 4510 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:59:13 has no hits.
BS10059.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:28:04 Download gff for
BS10059.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-PA | 86..987 | 17..918 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:44:50 Download gff for
BS10059.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-PA | 86..987 | 17..918 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 21:51:22 Download gff for
BS10059.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 345..1252 | 9..918 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:33:47 Download gff for
BS10059.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 345..1252 | 9..918 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:33:47 Download gff for
BS10059.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20831530..20832437 | 9..918 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 21:51:22 Download gff for
BS10059.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16657252..16658159 | 9..918 | 99 | | Minus |
BS10059.5prime Sequence
843 bp (788 high quality bases) assembled on 2006-04-19
> BS10059.5prime
GAAGTTATCAGTCGACATGCGGAAAATATACGACATACTGAAGAGGATGA
GAGAAACGGACAGTGGTTTCAATCCCCAGGAATTTGATACAGATGGCCTG
GAAAATAGTTTGGACTCGGATGGAGGCGAGGAAGGAGAGTCAGAAGAAGA
TGAGGCGGAAGAAAACGTCACCGAGGGGGACATACTGGATGAAGACCTGG
AGGAAGACATTGCAACTCGACTGAAAGGCGTTGATATCAACGATGCGGAT
GAAGTTTGGAGCCGGTTAACTACAGAGGAGCAAGATGAGTTCCAGAAATT
GATCACCAATGGAGATATCATGAAGCTTATGCCAGACTACAAGCCCTGGT
GGATCAAGCCGAAGAACTCTAAGATTGTGATTATACCTACACCCGAAGAA
GCTGCCAAGAAAGAGAGCCGTGTTCCCGAAATTTTCGGGAGCATTGCCAA
ATTCTCCGATATATGCAAGAAAACTCCGTCTCCGTGCCTGCACTACAATT
TGTGGAACATACTAAGCGCCTACGCCTGTGTGGCTCGTTTCTTTGGCGGC
GAACAGAGGACCAATGCCAGCGAGGCAGTGGCCCACCTTGTCAATCTCAG
CGCCACCTTAAAGTACGGCACCAACTTCGAGGATGCTGAGGACGCTATTG
TCTCCGTAGAGATGGAAGCCATCACCACGGGTAATGGTCCTGCCGGCGCG
GCTGCAGTTGGAAGTGCTGCAGGAGGTGCCAATTTCCTCGTCGACAACAG
GGAGCAGCTGCAGCAGGATGCCCGCCAGTTGATGGCTACGAAGGAGCACA
AGTTGGCCGCCCTTAGTGATGTTCTCTATCTGCTGCAGCAGAC
BS10059.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:40:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-PA | 987 | CG31223-RA | 1..827 | 17..843 | 4135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:35:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-RA | 1270 | CG31223-RA | 257..1086 | 14..843 | 4150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:35:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20831442..20832271 | 14..843 | 4150 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:35:24 has no hits.
BS10059.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:28:05 Download gff for
BS10059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-PA | 1..827 | 17..843 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:44:51 Download gff for
BS10059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-PA | 1..827 | 17..843 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:50:43 Download gff for
BS10059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 255..1086 | 10..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:08:39 Download gff for
BS10059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 255..1086 | 10..843 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:08:39 Download gff for
BS10059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20831440..20832271 | 10..843 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:50:43 Download gff for
BS10059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16657162..16657993 | 10..843 | 99 | | Plus |
BS10059.complete Sequence
1019 bp (1019 high quality bases) assembled on 2006-03-25
GenBank Submission: FJ636546
> BS10059.complete
GAAGTTATCAGTCGACATGCGGAAAATATACGACATACTGAAGAGGATGA
GAGAAACGGACAGTGGTTTCAATCCCCAGGAATTTGATACAGATGGCCTG
GAAAATAGTTTGGACTCGGATGGAGGCGAGGAAGGAGAGTCAGAAGAAGA
TGAGGCGGAAGAAAACGTCACCGAGGGGGACATACTGGATGAAGACCTGG
AGGAAGACATTGCAACTCGACTGAAAGGCGTTGATATCAACGATGCGGAT
GAAGTTTGGAGCCGGTTAACTACAGAGGAGCAAGATGAGTTCCAGAAATT
GATCACCAATGGAGATATCATGAAGCTTATGCCAGACTACAAGCCCTGGT
GGATCAAGCCGAAGAACTCTAAGATTGTGATTATACCTACACCCGAAGAA
GCTGCCAAGAAAGAGAGCCGTGTTCCCGAAATTTTCGGGAGCATTGCCAA
ATTCTCCGATATATGCAAGAAAACTCCGTCTCCGTGCCTGCACTACAATT
TGTGGAACATACTAAGCGCCTACGCCTGTGTGGCTCGTTTCTTTGGCGGC
GAACAGAGGACCAATGCCAGCGAGGCAGTGGCCCACCTTGTCAATCTCAG
CGCCACCTTAAAGTACGGCACCAACTTCGAGGATGCTGAGGACGCTATTG
TCTCCGTAGAGATGGAAGCCATCACCACGGGTAATGGTCCTGCCGGCGCG
GCTGCAGTTGGAAGTGCTGCAGGAGGTGCCAATTTCCTCGTCGACAACAG
GGAGCAGCTGCAGCAGGATGCCCGCCAGTTGATGGCTACGAAGGAGCACA
AGTTGGCCGCCCTTAGTGATGTTCTCTATCTGCTGCAGCAGACGAAGGCA
ATCAGTCGCCGTAAGAATACCCAGGAAGCCGAGTTCCAGAAGCTGTTCGC
TTTGGCCAGCGGAAGTGTGCAATTGGATCGCACCAAACTGGCGCAACTGG
TTCGCAAAATCGAGTTTATGCTGTCGTATGTGGCGCGGGAAGAAGTCCTT
TAAAAGCTTTCTAGACCAT
BS10059.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:40:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-RA | 987 | CG31223-PA | 1..987 | 17..1003 | 4935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:41:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-RA | 1270 | CG31223-RA | 257..1246 | 14..1003 | 4950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:40:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20831442..20832431 | 14..1003 | 4950 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:40:57 has no hits.
BS10059.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:38:23 Download gff for
BS10059.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 1..987 | 17..1003 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:24:04 Download gff for
BS10059.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 190..1187 | 10..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:01:06 Download gff for
BS10059.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 260..1244 | 17..1001 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:38:23 Download gff for
BS10059.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 190..1187 | 10..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:24:40 Download gff for
BS10059.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 260..1244 | 17..1001 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:24:40 Download gff for
BS10059.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20831445..20832429 | 17..1001 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:01:06 Download gff for
BS10059.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16657167..16658151 | 17..1001 | 100 | | Plus |
BS10059.pep Sequence
Translation from 16 to 1002
> BS10059.pep
MRKIYDILKRMRETDSGFNPQEFDTDGLENSLDSDGGEEGESEEDEAEEN
VTEGDILDEDLEEDIATRLKGVDINDADEVWSRLTTEEQDEFQKLITNGD
IMKLMPDYKPWWIKPKNSKIVIIPTPEEAAKKESRVPEIFGSIAKFSDIC
KKTPSPCLHYNLWNILSAYACVARFFGGEQRTNASEAVAHLVNLSATLKY
GTNFEDAEDAIVSVEMEAITTGNGPAGAAAVGSAAGGANFLVDNREQLQQ
DARQLMATKEHKLAALSDVLYLLQQTKAISRRKNTQEAEFQKLFALASGS
VQLDRTKLAQLVRKIEFMLSYVAREEVL*
BS10059.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:29:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-PA | 328 | CG31223-PA | 1..328 | 1..328 | 1670 | 100 | Plus |
