Clone Sequence Records
BS10082.3prime Sequence
834 bp (833 high quality bases) assembled on 2006-04-19
> BS10082.3prime
ATGGTCTAGAAAGCTTCTAGTAAAAGAATAGCAGCCGTTCCTGGGCAGAG
GCGGAAAGGAGGCGCCACGATCGCTTGATGCTGACATACTGTATTAAAGC
GCGTATGCTGATCAGGAAGCCAAAGGCACAGATCAGCCACCAGAGCCAGG
AGTTTTCGTGCGAGGCCAAGTCCGTCGAGTGCTTCACGATCAGCGTCCAT
TTAGCCAGCGACAATCCGAATCCCGACAATGCTCCATATCGGGCGGCGAT
TGTGTGACAGAAACAGGTGAGCATCAGGAAGCCGATCCAGTTAAACAAAA
AGGCCACAATGAAGGCCGTGATGAACATGATGTCCGTGCCGAGCAAGTTG
TCGGTGGTGGACAGACTATTTTCCGGATCGCTGGCATCGATGGCGATGAA
CGTGAGTGCCGGCTGGGCAGATCGCACAGCAGCGGCTCCATCGCGCAGCG
GATTTGGCGGCAGTAGCGGATTCGGCGGCGGCGGTAGCTGCTGCGAGGAG
GGTAAAGTCAAAAAGGCGGGCGGCAGCTCTCCGTTCAGCGACTTTTCCAT
TTGAACCTCCTCGTACGTGGGCAACTTCCCGTGTATTTCTGGCGGCAGTT
GTGCATTCATAAGGTCCGCCTGGCTCGGCAGCTGCACTTGCATCTGTATC
GGGATCTGACTGGGATCGGGTGTGGCCAAGGCCAGCGGTGGCATCTGAGC
CGGCAGTGCTACCTGCTGGCCATGGCCAACGTTCGCCTCGTACGGTGGCG
GAGCACTGAAGTCCGCCTTTGGCGGTCCCAACTGATCATCCCCGGGAGAC
GGCTGGTTGTTGTGCGGCATGTCGACTGATAACT
BS10082.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:41:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32177-PA | 804 | CG32177-RA | 1..804 | 820..17 | 4020 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 16:24:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-RA | 2094 | CG32177-RA | 291..1095 | 821..17 | 4025 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 16:24:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17648441..17649245 | 17..821 | 4025 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 16:24:41 has no hits.
BS10082.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:28:52 Download gff for
BS10082.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-PA | 1..804 | 17..820 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:45:57 Download gff for
BS10082.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-PA | 1..804 | 17..820 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:36:11 Download gff for
BS10082.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 288..1099 | 13..827 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:49:25 Download gff for
BS10082.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 288..1099 | 13..827 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:49:25 Download gff for
BS10082.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17648437..17649252 | 13..832 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:36:11 Download gff for
BS10082.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17641537..17642352 | 13..832 | 99 | | Plus |
BS10082.5prime Sequence
834 bp (818 high quality bases) assembled on 2006-04-19
> BS10082.5prime
GAAGTTATCAGTCGACATGCCGCACAACAACCAGCCGTCTCCCGGGGATG
ATCAGTTGGGACCGCCAAAGGCGGACTTCAGTGCTCCGCCACCGTACGAG
GCGAACGTTGGCCATGGCCAGCAGGTAGCACTGCCGGCTCAGATGCCACC
GCTGGCCTTGGCCACACCCGATCCCAGTCAGATCCCGATACAGATGCAAG
TGCAGCTGCCGAGCCAGGCGGACCTTATGAATGCACAACTGCCGCCAGAA
ATACACGGGAAGTTGCCCACGTACGAGGAGGTTCAAATGGAAAAGTCGCT
GAACGGAGAGCTGCCGCCCGCCTTTTTGACTTTACCCTCCTCGCAGCAGC
TACCGCCGCCGCCGAATCCGCTACTGCCGCCAAATCCGCTGCGCGATGGA
GCCGCTGCTGTGCGATCTGCCCAGCCGGCACTCACGTTCATCGCCATCGA
TGCCAGCGATCCGGAAAATAGTCTGTCCACCACCGACAACTTGCTCGGCA
CGGACATCATGTTCATCACGGCCTTCATTGTGGCCTTTTTGTTTAACTGG
ATCGGCTTCCTGATGCTCACCTGTTTCTGTCACACAATCGCCGCCCGATA
TGGAGCATTGTCGGGATTCGGATTGTCGCTGGCTAAATGGACGCTGATCG
TGAAGCACTCGACGGACTTGGCCTCGCACGAAAACTCCTGGCTCTGGTGG
CTGATCTGTGCCTTTGGCTTCCTGATCAGCATACGCGCTTTAATACAGTA
TGTCAGCATCAAGCGATCGTGGCGCCTCCTTTCCGCCTCTGCCCAGGAAC
GGCTGCTATTCTTTTACTAGAAGCTTTCTAGACC
BS10082.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:41:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32177-PA | 804 | CG32177-RA | 1..804 | 17..820 | 4020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:21:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-RA | 2094 | CG32177-RA | 291..1095 | 16..820 | 4025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:21:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17648441..17649245 | 820..16 | 4025 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 20:21:15 has no hits.
BS10082.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:28:53 Download gff for
BS10082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-PA | 1..804 | 17..820 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:45:59 Download gff for
BS10082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-PA | 1..804 | 17..820 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:37:56 Download gff for
BS10082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 288..1099 | 10..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:43:29 Download gff for
BS10082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 288..1099 | 10..824 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:43:29 Download gff for
BS10082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17648437..17649252 | 5..824 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:37:56 Download gff for
BS10082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17641537..17642352 | 5..824 | 99 | | Minus |
BS10082.complete Sequence
836 bp (836 high quality bases) assembled on 2006-03-25
GenBank Submission: FJ636556
> BS10082.complete
GAAGTTATCAGTCGACATGCCGCACAACAACCAGCCGTCTCCCGGGGATG
ATCAGTTGGGACCGCCAAAGGCGGACTTCAGTGCTCCGCCACCGTACGAG
GCGAACGTTGGCCATGGCCAGCAGGTAGCACTGCCGGCTCAGATGCCACC
GCTGGCCTTGGCCACACCCGATCCCAGTCAGATCCCGATACAGATGCAAG
TGCAGCTGCCGAGCCAGGCGGACCTTATGAATGCACAACTGCCGCCAGAA
ATACACGGGAAGTTGCCCACGTACGAGGAGGTTCAAATGGAAAAGTCGCT
GAACGGAGAGCTGCCGCCCGCCTTTTTGACTTTACCCTCCTCGCAGCAGC
TACCGCCGCCGCCGAATCCGCTACTGCCGCCAAATCCGCTGCGCGATGGA
GCCGCTGCTGTGCGATCTGCCCAGCCGGCACTCACGTTCATCGCCATCGA
TGCCAGCGATCCGGAAAATAGTCTGTCCACCACCGACAACTTGCTCGGCA
CGGACATCATGTTCATCACGGCCTTCATTGTGGCCTTTTTGTTTAACTGG
ATCGGCTTCCTGATGCTCACCTGTTTCTGTCACACAATCGCCGCCCGATA
TGGAGCATTGTCGGGATTCGGATTGTCGCTGGCTAAATGGACGCTGATCG
TGAAGCACTCGACGGACTTGGCCTCGCACGAAAACTCCTGGCTCTGGTGG
CTGATCTGTGCCTTTGGCTTCCTGATCAGCATACGCGCTTTAATACAGTA
TGTCAGCATCAAGCGATCGTGGCGCCTCCTTTCCGCCTCTGCCCAGGAAC
GGCTGCTATTCTTTTACTAGAAGCTTTCTAGACCAT
BS10082.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:43:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-RA | 804 | CG32177-PA | 1..804 | 17..820 | 4020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:43:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-RA | 2094 | CG32177-RA | 291..1095 | 16..820 | 4025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:43:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17648441..17649245 | 820..16 | 4025 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:43:27 has no hits.
BS10082.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:50:40 Download gff for
BS10082.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-RA | 1..804 | 17..820 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:39:18 Download gff for
BS10082.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-RA | 284..1095 | 10..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:58:17 Download gff for
BS10082.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 292..1095 | 17..820 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:50:41 Download gff for
BS10082.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-RA | 284..1095 | 10..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:25:32 Download gff for
BS10082.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 292..1095 | 17..820 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:25:32 Download gff for
BS10082.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17648441..17649244 | 17..820 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:58:17 Download gff for
BS10082.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17641541..17642344 | 17..820 | 100 | | Minus |
BS10082.pep Sequence
Translation from 16 to 819
> BS10082.pep
MPHNNQPSPGDDQLGPPKADFSAPPPYEANVGHGQQVALPAQMPPLALAT
PDPSQIPIQMQVQLPSQADLMNAQLPPEIHGKLPTYEEVQMEKSLNGELP
PAFLTLPSSQQLPPPPNPLLPPNPLRDGAAAVRSAQPALTFIAIDASDPE
NSLSTTDNLLGTDIMFITAFIVAFLFNWIGFLMLTCFCHTIAARYGALSG
FGLSLAKWTLIVKHSTDLASHENSWLWWLICAFGFLISIRALIQYVSIKR
SWRLLSASAQERLLFFY*
BS10082.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:47:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-PA | 267 | CG32177-PA | 1..267 | 1..267 | 1413 | 100 | Plus |
