Clone BS10095 Report

Search the DGRC for BS10095

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:100
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG11107-RA
Protein status:BS10095.pep: full length peptide match
Sequenced Size:2222

Clone Sequence Records

BS10095.3prime Sequence

938 bp (826 high quality bases) assembled on 2006-04-19

> BS10095.3prime
ATGGTCTAGAAAGCTTTTAGAAACCCTTCTGGTACTGCTTGGTCTCCAAC
CGCTGTTGCAACAACTCCAGCTGTCGTTTCGCCTCGCACTGGGGGAAGTT
GTTCAAGTCATAATATTGGGGCGCCAGGCAGCACAACCATTCAGGTTTGA
CATCTGTCACCGTGCGAATGTAGTTCTTTGTAGTCAGCACGAACTCATTG
TAGATGACCCAATCGGGCTTGTGGTCGAGACAAGTCGACGGATGCAGCTG
CACGTTCTGGTTGTCCTTGATGGTCAGATAGTAGCCAGTGCGCTCCAGGT
GGGCCACCTGCATGAAGAAGCCCTGCACGAGGGCCTTTCGGATGTTTACA
TAGTAGTCCTTCGAGGTGAATTCAGTGCTCGTGCGCCGCAAGTTGAAGCG
GTCCATGATTCTAGCCAGCTGCTGGCGCACGTTATCCGCACTCTTTAGCG
AGCGGAAGTTTATGAAGTTCTCGTAGCACCAGTTTGGATCCTCACTGCTC
TGCTTAAAGGCGTGATAGACATTAAGCAACGTCAGGTGGTCTCCGTCAAT
GTGGGCGAATCGCATCTTGGCCTCATCGGCAGCTTTCTTCGCCTCGTTGG
GGCGAACGAAGCATTGTGGAACCGACAACATGGCCGTTATGGAAAGTATT
TCATTAGAGCAGTTATGTTGGCAGCTGGCAATCAGCATTTTGGCCAGCTG
CGGATCCAATGGAAACTCGGACATAACGGCACCCAGGTCTGTAAGATTTC
CGTCATCATCCAGGGCGGCCAGATAGTTGAGCAACTCCAGGGCACGCATC
AAGGTCTCTGGAGCAGGGGGGTCCATAAAATCGAAATGCACCAGATCATC
GATGCCCAACTTCTTGAGCTGCAGAACCACAGTGCCCAAATTGGAACGCA
GAATTTCGGGGGTAGGTGTTGTCCTGCATCTCGTTTTT

BS10095.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG11107-PA 2190 CG11107-RA 1296..2190 911..17 4450 99.8 Minus
CG11107-PA 2190 CG11107-RA 1270..1299 938..909 150 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:58:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG11107-RB 2610 CG11107-RB 1474..2394 938..17 4570 99.8 Minus
CG11107-RA 2747 CG11107-RA 1611..2531 938..17 4570 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:58:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7390268..7390625 498..141 1775 99.7 Minus
2R 25286936 2R 7389246..7389510 886..622 1325 100 Minus
2R 25286936 2R 7390680..7390807 144..17 640 100 Minus
2R 25286936 2R 7390077..7390201 622..498 625 100 Minus
2R 25286936 2R 7389130..7389182 938..885 205 96.3 Minus
Blast to na_te.dros performed on 2015-02-11 10:58:22 has no hits.

BS10095.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:29:14 Download gff for BS10095.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11107-PA 1270..2190 17..938 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:46:28 Download gff for BS10095.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11107-PA 1270..2190 17..938 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 21:51:17 Download gff for BS10095.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 1611..2531 17..938 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:33:35 Download gff for BS10095.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 1611..2531 17..938 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:33:35 Download gff for BS10095.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7390680..7390807 17..144 100   Minus
2R 7390078..7390200 499..621 100 -> Minus
2R 7389130..7389181 886..938 96 -> Minus
2R 7389247..7389510 622..885 100 -> Minus
2R 7390268..7390621 145..498 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 21:51:17 Download gff for BS10095.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3276635..3276686 886..938 96 -> Minus
arm_2R 3276752..3277015 622..885 100 -> Minus
arm_2R 3277583..3277705 499..621 100 -> Minus
arm_2R 3277773..3278126 145..498 100 -> Minus
arm_2R 3278185..3278312 17..144 100   Minus

BS10095.5prime Sequence

910 bp (794 high quality bases) assembled on 2006-04-19

> BS10095.5prime
GAAGTTATCAGTCGACATGTCCAAGCGTCGAATCGAAGTGGGGGAGACCT
ACGGCAGCAAGGCGAAGAAGGACCCGGAGGCGTCCTCCTCGTCGGCGGCA
GCCGCTGCCGGCACAGTGGCTCAAATCCTGGGCGGATTCGTGCCCAACAA
GCAACCGCCCACGATGAACCCGCTGACCAACACGCCGTACTCACAACGGT
ACCAGAATCTCTACAAGAAGCGCATTGCGCTGCCCGTGTTCGAGTACCAG
GCGGACTTTATGCGGCTGCTCAGCCTGCACCAGTGTATTGTGCTGGTGGG
CGAGACAGGCTCCGGCAAGACGACCCAGATCCCGCAGTGGTGCGTGGACT
TCGCAGTATCCAAGGGGCGCAAGGGAGTCTCCTGCACACAGCCACGTCGA
GTTGCCGCCATGTCCGTGGCCCAGCGCGTTTCGGAGGAGATGGACGTAAA
ACTGGGCGAAGAGGTCGGCTACTCCATCCGTTTCGAGGACTGCTCCACGG
CCAAGACGCTGCTCAAGTACATGACCGATGGTATGTTGTTGCGCGAGGCC
ATGTCTGATCCCATGCTGGACCAGTACCAGGTCATTCTGCTTGACGAGGC
TCACGAGCGGACCTTGGCCACTGACATTCTAATGGGCGTGCTCAAGGAGG
TCATTCGTCAGCGCAGCGACCTTAAGCTGGTGGTCATGTCCGCCACACTG
GACGCCGGCAAGTTCCAGCAGTATTTCGACAACGCACCGCTCATGAAAGT
GCCCGGTCGCACACATCCCGTGGAGATCTTCTACACGCCCGAACCAGAAA
GAGATTACCTAGAGGCTGCTATTCGCACGGTAATCCAGATACACATGTGC
GAGGAAATTGAGGGTGATATCCTAATGTTTCTCACGGGCCAGGAGGAGAT
TGAGGAGGCT

BS10095.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG11107-PA 2190 CG11107-RA 1..894 17..910 4420 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:35:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG11107-RB 2610 CG11107-RB 204..1098 16..910 4445 99.8 Plus
CG11107-RA 2747 CG11107-RA 341..1235 16..910 4445 99.8 Plus
l(1)G0007-RA 3880 CG32604-RA 1851..2015 383..547 285 78.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:35:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7387635..7388430 70..865 3965 99.9 Plus
2R 25286936 2R 7387527..7387581 16..70 275 100 Plus
2L 23513712 2L 19125754..19125896 525..383 250 78.3 Minus
2R 25286936 2R 7388707..7388754 863..910 225 97.9 Plus
Blast to na_te.dros performed on 2015-02-11 09:35:05 has no hits.

BS10095.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:29:15 Download gff for BS10095.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11107-PA 1..894 17..910 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:46:29 Download gff for BS10095.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11107-PA 1..894 17..910 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:50:30 Download gff for BS10095.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 341..1235 16..910 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:07:59 Download gff for BS10095.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 341..1235 16..910 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:07:59 Download gff for BS10095.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7387527..7387580 16..69 100 -> Plus
2R 7387635..7388428 70..863 99 -> Plus
2R 7388708..7388754 864..910 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:50:30 Download gff for BS10095.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3275032..3275085 16..69 100 -> Plus
arm_2R 3275140..3275933 70..863 99 -> Plus
arm_2R 3276213..3276259 864..910 97   Plus

BS10095.complete Sequence

2222 bp assembled on 2009-08-24

GenBank Submission: KX800862

> BS10095.complete
GAAGTTATCAGTCGACATGTCCAAGCGTCGAATCGAAGTGGGGGAGACCT
ACGGCAGCAAGGCGAAGAAGGACCCGGAGGCGTCCTCCTCGTCGGCGGCA
GCCGCTGCCGGCACAGTGGCTCAAATCCTGGGCGGATTCGTGCCCAACAA
GCAACCGCCCACGATGAACCCGCTGACCAACACGCCGTACTCACAACGGT
ACCAGAATCTCTACAAGAAGCGCATTGCGCTGCCCGTGTTCGAGTACCAG
GCGGACTTTATGCGGCTGCTCAGCCTGCACCAGTGTATTGTGCTGGTGGG
CGAGACAGGCTCCGGCAAGACGACCCAGATCCCGCAGTGGTGCGTGGACT
TCGCAGTATCCAAGGGGCGCAAGGGAGTCTCCTGCACACAGCCACGTCGA
GTTGCCGCCATGTCCGTGGCCCAGCGCGTTTCGGAGGAGATGGACGTAAA
ACTGGGCGAAGAGGTCGGCTACTCCATCCGTTTCGAGGACTGCTCCACGG
CCAAGACGCTGCTCAAGTACATGACCGATGGTATGTTGTTGCGCGAGGCC
ATGTCTGATCCCATGCTGGACCAGTACCAGGTCATTCTGCTTGACGAGGC
TCACGAGCGGACCTTGGCCACTGACATTCTAATGGGCGTGCTCAAGGAGG
TCATTCGTCAGCGCAGCGACCTTAAGCTGGTGGTCATGTCCGCCACACTG
GACGCCGGCAAGTTCCAGCAGTATTTCGACAACGCACCGCTCATGAAAGT
GCCCGGTCGCACACATCCCGTGGAGATCTTCTACACGCCCGAACCAGAAA
GAGATTACCTAGAGGCTGCTATTCGCACGGTAATCCAGATACACATGTGC
GAGGAAATTGAGGGTGATATCCTAATGTTCCTCACGGGCCAGGAGGAGAT
TGAGGAGGCTTGCAAGCGCATCAAGCGCGAGATCGACAATTTGGGCTCAG
AAATTGGAGAGCTGAAATGCATTCCCCTGTACTCGACGCTGCCGCCCAAT
TTGCAGCAGCGCATCTTCGAACCGGCCCCGCCGCCAAATGCTAATGGCGC
AATTGGACGCAAGGTCGTGGTGTCCACCAACATTGCCGAAACCTCGCTGA
CCATTGACGGAGTGGTGTTCGTGATTGATCCAGGCTTCGCCAAGCAAAAG
GTGTACAATCCTCGCATTCGAGTGGAGAGTCTGCTCGTCTCACCCATTTC
AAAAGCGTCTGCGCAGCAGAGATCCGGTCGTGCTGGACGTACGCGTCCTG
GCAAGTGTTTCCGTCTGTACACGGAAAAGGCGTTTAAAAACGAGATGCAG
GACAACACCTACCCCGAAATTCTGCGCTCCAATTTGGGCACTGTGGTTCT
GCAGCTCAAGAAGTTGGGCATCGATGATCTGGTGCATTTCGATTTTATGG
ACCCCCCTGCTCCAGAGACCTTGATGCGTGCCCTGGAGTTGCTCAACTAT
CTGGCCGCCCTGGATGATGACGGAAATCTTACAGACCTGGGTGCCGTTAT
GTCCGAGTTTCCATTGGATCCGCAGCTGGCCAAAATGCTGATTGCCAGCT
GCCAACATAACTGCTCTAATGAAATACTTTCCATAACGGCCATGTTGTCG
GTTCCACAATGCTTCGTTCGCCCCAACGAGGCGAAGAAAGCTGCCGATGA
GGCCAAGATGCGATTCGCCCACATTGACGGAGACCACCTGACGTTGCTTA
ATGTCTATCACGCCTTTAAGCAGAGCAGTGAGGATCCAAACTGGTGCTAC
GAGAACTTCATAAACTTCCGCTCGCTAAAGAGTGCGGATAACGTGCGCCA
GCAGCTGGCTAGAATCATGGACCGCTTCAACTTGCGGCGCACGAGCACTG
AATTCACCTCGAAGGACTACTATGTAAACATCCGAAAGGCCCTCGTGCAG
GGCTTCTTCATGCAGGTGGCCCACCTGGAGCGCACTGGCTACTATCTGAC
CATCAAGGACAACCAGAACGTGCAGCTGCATCCGTCGACTTGTCTCGACC
ACAAGCCCGATTGGGTCATCTACAATGAGTTCGTGCTGACTACAAAGAAC
TACATTCGCACGGTGACAGATGTCAAACCTGAATGGTTGTGCTGCCTGGC
GCCCCAATATTATGACTTGAACAACTTCCCCCAGTGCGAGGCGAAACGAC
AGCTGGAGTTGTTGCAACAGCGGTTGGAGACCAAGCAGTACCAGAAGGGT
TTCTAAAAGCTTTCTAGACCAT

BS10095.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:27:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG11107-RB 2190 CG11107-PB 1..2190 17..2206 10935 100 Plus
CG11107-RA 2190 CG11107-PA 1..2190 17..2206 10935 100 Plus
l(1)G0007-RA 3669 CG32604-PA 1750..1914 383..547 285 78.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG11107-RB 2610 CG11107-RB 204..2394 16..2206 10940 100 Plus
CG11107-RA 2747 CG11107-RA 341..2531 16..2206 10940 100 Plus
l(1)G0007-RA 3880 CG32604-RA 1851..2015 383..547 285 78.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7387635..7388430 70..865 3965 99.9 Plus
2R 25286936 2R 7388707..7389182 863..1338 2380 100 Plus
2R 25286936 2R 7390268..7390625 1725..2082 1775 99.7 Plus
2R 25286936 2R 7389246..7389510 1337..1601 1325 100 Plus
2R 25286936 2R 7390680..7390807 2079..2206 640 100 Plus
2R 25286936 2R 7390077..7390201 1601..1725 625 100 Plus
2R 25286936 2R 7387527..7387581 16..70 275 100 Plus
2L 23513712 2L 19125754..19125896 525..383 250 78.3 Minus
Blast to na_te.dros performed on 2014-11-28 01:27:16 has no hits.

BS10095.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:01:28 Download gff for BS10095.complete
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 315..2502 17..2204 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:48:05 Download gff for BS10095.complete
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 342..2529 17..2204 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:48:57 Download gff for BS10095.complete
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 342..2529 17..2204 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:48:57 Download gff for BS10095.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7387528..7387580 17..69 100 -> Plus
2R 7387635..7388428 70..863 99 -> Plus
2R 7388708..7389181 864..1337 100 -> Plus
2R 7389247..7389510 1338..1601 100 -> Plus
2R 7390078..7390200 1602..1724 100 -> Plus
2R 7390268..7390621 1725..2078 100 -> Plus
2R 7390680..7390805 2079..2204 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:48:05 Download gff for BS10095.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3275033..3275085 17..69 100 -> Plus
arm_2R 3275140..3275933 70..863 99 -> Plus
arm_2R 3276213..3276686 864..1337 100 -> Plus
arm_2R 3276752..3277015 1338..1601 100 -> Plus
arm_2R 3277583..3277705 1602..1724 100 -> Plus
arm_2R 3277773..3278126 1725..2078 100 -> Plus
arm_2R 3278185..3278310 2079..2204 100   Plus

BS10095.pep Sequence

Translation from 16 to 2205

> BS10095.pep
MSKRRIEVGETYGSKAKKDPEASSSSAAAAAGTVAQILGGFVPNKQPPTM
NPLTNTPYSQRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSG
KTTQIPQWCVDFAVSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEV
GYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQVILLDEAHERTL
ATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTH
PVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACK
RIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKV
VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQ
QRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKL
GIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPL
DPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRF
AHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLARI
MDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYLTIKDNQ
NVQLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYD
LNNFPQCEAKRQLELLQQRLETKQYQKGF*

BS10095.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:38:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG11107-PB 729 CG11107-PB 1..729 1..729 3787 100 Plus
CG11107-PA 729 CG11107-PA 1..729 1..729 3787 100 Plus
l(2)37Cb-PA 894 CG10689-PA 236..870 56..699 1732 53.1 Plus
pea-PA 1242 CG8241-PA 579..1227 65..721 1709 51.7 Plus
l(1)G0007-PA 1222 CG32604-PA 523..1153 61..701 1484 45.7 Plus