Clone BS10137 Report

Search the DGRC for BS10137

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:101
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG17322-RA
Protein status:BS10137.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS10137.3prime Sequence

905 bp (845 high quality bases) assembled on 2006-04-19

> BS10137.3prime
ATGGTCTAGAAAGCTTTTATTTGCGTTTTAGTTTGCGGTCACCTTTGGGT
TCCCTTCTTTTAAACATTCGGATTAGTCCCAAGAGCGTGATCACAGGTAG
TAGCAGGCTTAGGGCCACGACCGAGTAGACATCCAAGGAGTAGTAAACAA
AGCGGGAGAGATGCACGGCACTTGGTTGGGTCAGAGGAGCTCCTTTCGTC
TCCGCCACATGTTCCACCCACCAAATGGCCGTCTCCAAGGGACCTTGGAT
GCGGTTGTTGTACGATGAGGCCACCTCCTTGGCTCTTGCCTTGAAAGAAG
GATCTAGTGCCTTGGTCAACGCTTCGTAGACAGTATTCTCATCCAGTTTC
TTAAGCTCTAATTGCAAGGCCATTCCGCGCTGCACCAATGCGGCAATATT
GAGGGATTGGTCGCCGTAAATTGGGACACCCACAATCGGCACAGCACTGG
AGACCGCCTCCGTGGTGCCCATTAAGCCACCGTGGGACATAAATACCTTT
AGATTTGGATGAGCGAGGATGTCTCGCTGAGGCAGCCACTTCCTGATGTG
CAGATTTGGTGGCTTATTGGGCAGCGTGTCATTTTCATACTTCCAGATGA
CCTCCTGCTCCAATCTTCCAATCGCTTTAACGATTCCATCTCTCCGAGCA
GCGGAAAGAGAACACGCTTTCAGCTGAGAGCCCCAGCTAATTAGGATGAC
TCCTTTGGGTGCGTTATCCAGTATTTTCTGAAGATCCGAGGGCAGCGGTT
TCGGTGGACTTATATGTACACCACCCACTTCGATGACGTTTGGGGGCAAA
GGCTTTGGCCCACTGAGCGAAAAGTGCTGGTTGACCAGCATTAGAGAAGT
ATTCCTCACCAAGTCCTCCGTGGACGGCAGTCCAGGACCGAATCTTTGGC
GAATC

BS10137.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:42:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG17322-PC 1554 CG17322-RC 666..1554 905..17 4445 100 Minus
CG17322-PD 1554 CG17322-RD 666..1554 905..17 4445 100 Minus
CG17322-PA 1554 CG17322-RA 666..1554 905..17 4445 100 Minus
CG17322-PB 1554 CG17322-RB 666..1554 905..17 4445 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 10:20:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG17322-RB 1903 CG17322-RB 820..1708 905..17 4445 100 Minus
CG17322-RA 1807 CG17322-RA 724..1612 905..17 4445 100 Minus
CG17322-RD 1900 CG17322-RD 817..1705 905..17 4445 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 10:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18827976..18828864 905..17 4445 100 Minus
2L 23513712 2L 18825560..18825713 609..456 245 77.3 Minus
Blast to na_te.dros performed on 2015-02-01 10:19:57 has no hits.

BS10137.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:30:30 Download gff for BS10137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17322-PD 666..1554 17..905 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:48:13 Download gff for BS10137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17322-PB 666..1554 17..905 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:26:20 Download gff for BS10137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17322-RD 817..1707 13..905 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:03:17 Download gff for BS10137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17322-RD 817..1707 13..905 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:03:17 Download gff for BS10137.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 18827976..18828866 13..905 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:26:20 Download gff for BS10137.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18827976..18828866 13..905 99   Minus

BS10137.5prime Sequence

876 bp (781 high quality bases) assembled on 2006-04-19

> BS10137.5prime
GAAGTTATCAGTCGACATGTGTGGTTGTTGGAAGGTTTTCTGCCTGCTGG
CGCTACTTTCCCTGGTCGCTTTCAGCGATTCCCTGCGAATTCTGGGTCTG
TTTCCGCACCCGGCCATCAGTCACTTCAAGTTCTTTCACCCAATCATGCG
CGGATTGGCCGAGGCCGGTCACAGCGTGGATGTCATCAGTCCATTCGAGG
ACAAGGACCCTCCAAACGGATACAAGGACCACCTGCTGCCGCCCTCCACC
TTGACAGACACTATTAGCTTAGAGGACTTCGAACGGCCCTACAGCTTCCT
ATTTCACTATGTAGAGTTCTTTATCCTGCACAAAATGGGAAGAGAGGACT
GCAATACCACACTGCACAGCAGAGCCCTAACTGAGATCCTTAAGAATCCT
CCTGGCTACTACGATGTAATTTTACTGGAGCAATTCAATACTGACTGTGC
GATGAGCGTGGCCCATGTTTTCCAAGCTCCGGTCATTGGAATGAGCAGCT
GTGCCCTGATGCCATGGCATTATGAACGATTTGGAGCCCCTCTGATCCCA
TCGTATATATCAGCATTGTTCCAGGGACAATCCCAGGAGATGTCCTTTGC
GGGACGATTGGGCAACTGGATTACTGTGCACTCCCTCAACTTGCTGTATA
AAATGTTTACAGTTCCCGCCGGAAACGCCTTGATTCGCCAAAGATTCGGT
CCTGGACTGCCGTCCACGGAGGACTTGGTGAGGAATACTTCTCTAATGCT
GGTCAACCAGCACTTTTCGCTCAGTGGGCCAAAGCCTTTGCCCCCAAACG
TCATCGAAGTGGGTGGTGTACATATAAGTCCACCGAAACCGCTGCCCTCG
GATCTTCAGAAATACTGGATAACGCA

BS10137.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:42:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG17322-PC 1554 CG17322-RC 1..846 17..862 4230 100 Plus
CG17322-PD 1554 CG17322-RD 1..846 17..862 4230 100 Plus
CG17322-PA 1554 CG17322-RA 1..846 17..862 4230 100 Plus
CG17322-PB 1554 CG17322-RB 1..846 17..862 4230 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:34:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG17322-RB 1903 CG17322-RB 155..1015 17..876 4280 99.9 Plus
CG17322-RA 1807 CG17322-RA 59..919 17..876 4280 99.9 Plus
CG17322-RD 1900 CG17322-RD 152..1012 17..876 4280 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:34:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18827508..18827886 273..651 1895 100 Plus
2L 23513712 2L 18827002..18827260 17..275 1295 100 Plus
2L 23513712 2L 18827946..18828171 652..876 1080 99.6 Plus
Blast to na_te.dros performed on 2015-02-13 00:34:29 has no hits.

BS10137.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:30:31 Download gff for BS10137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17322-PD 1..860 17..875 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:48:14 Download gff for BS10137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17322-PB 1..860 17..875 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:00:16 Download gff for BS10137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17322-RD 139..1011 4..875 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:46:48 Download gff for BS10137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17322-RD 139..1011 4..875 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:46:48 Download gff for BS10137.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18826989..18827259 4..274 98 -> Plus
2L 18827510..18827886 275..651 100 -> Plus
2L 18827946..18828170 652..875 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:00:16 Download gff for BS10137.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18826989..18827259 4..274 98 -> Plus
arm_2L 18827510..18827886 275..651 100 -> Plus
arm_2L 18827946..18828170 652..875 99   Plus

BS10137.complete Sequence

1586 bp (1586 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ636571

> BS10137.complete
GAAGTTATCAGTCGACATGTGTGGTTGTTGGAAGGTTTTCTGCCTGCTGG
CGCTACTTTCCCTGGTCGCTTTCAGCGATTCCCTGCGAATTCTGGGTCTG
TTTCCGCACCCGGCCATCAGTCACTTCAAGTTCTTTCACCCAATCATGCG
CGGATTGGCCGAGGCCGGTCACAGCGTGGATGTCATCAGTCCATTCGAGG
ACAAGGACCCTCCAAACGGATACAAGGACCACCTGCTGCCGCCCTCCACC
TTGACAGACACTATTAGCTTAGAGGACTTCGAACGGCCCTACAGCTTCCT
ATTTCACTATGTAGAGTTCTTTATCCTGCACAAAATGGGAAGAGAGGACT
GCAATACCACACTGCACAGCAGAGCCCTAACTGAGATCCTTAAGAATCCT
CCTGGCTACTACGATGTAATTTTACTGGAGCAATTCAATACTGACTGTGC
GATGAGCGTGGCCCATGTTTTCCAAGCTCCGGTCATTGGAATGAGCAGCT
GTGCCCTGATGCCATGGCATTATGAACGATTTGGAGCCCCTCTGATCCCA
TCGTATATATCAGCATTGTTCCAGGGACAATCCCAGGAGATGTCCTTTGC
GGGACGATTGGGCAACTGGATTACTGTGCACTCCCTCAACTTGCTGTATA
AAATGTTTACAGTTCCCGCCGGAAACGCCTTGATTCGCCAAAGATTCGGT
CCTGGACTGCCGTCCACGGAGGACTTGGTGAGGAATACTTCTCTAATGCT
GGTCAACCAGCACTTTTCGCTCAGTGGGCCAAAGCCTTTGCCCCCAAACG
TCATCGAAGTGGGTGGTGTACATATAAGTCCACCGAAACCGCTGCCCTCG
GATCTTCAGAAAATACTGGATAACGCACCCAAAGGAGTCATCCTAATTAG
CTGGGGCTCTCAGCTGAAAGCGTGTTCTCTTTCCGCTGCTCGGAGAGATG
GAATCGTTAAAGCGATTGGAAGATTGGAGCAGGAGGTCATCTGGAAGTAT
GAAAATGACACGCTGCCCAATAAGCCACCAAATCTGCACATCAGGAAGTG
GCTGCCTCAGCGAGACATCCTCGCTCATCCAAATCTAAAGGTATTTATGT
CCCACGGTGGCTTAATGGGCACCACGGAGGCGGTCTCCAGTGCTGTGCCG
ATTGTGGGTGTCCCAATTTACGGCGACCAATCCCTCAATATTGCCGCATT
GGTGCAGCGCGGAATGGCCTTGCAATTAGAGCTTAAGAAACTGGATGAGA
ATACTGTCTACGAAGCGTTGACCAAGGCACTAGATCCTTCTTTCAAGGCA
AGAGCCAAGGAGGTGGCCTCATCGTACAACAACCGCATCCAAGGTCCCTT
GGAGACGGCCATTTGGTGGGTGGAACATGTGGCGGAGACGAAAGGAGCTC
CTCTGACCCAACCAAGTGCCGTGCATCTCTCCCGCTTTGTTTACTACTCC
TTGGATGTCTACTCGGTCGTGGCCCTAAGCCTGCTACTACCTGTGATCAC
GCTCTTGGGACTAATCCGAATGTTTAAAAGAAGGGAACCCAAAGGTGACC
GCAAACTAAAACGCAAATAAAAGCTTTCTAGACCAT

BS10137.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:35:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG17322-RB 1554 CG17322-PB 1..1554 17..1570 7770 100 Plus
CG17322-RA 1554 CG17322-PA 1..1554 17..1570 7770 100 Plus
CG17322-RD 1554 CG17322-PD 1..1554 17..1570 7770 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:35:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG17322-RB 1903 CG17322-RB 155..1708 17..1570 7770 100 Plus
CG17322-RA 1807 CG17322-RA 59..1612 17..1570 7770 100 Plus
CG17322-RD 1900 CG17322-RD 152..1705 17..1570 7770 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:35:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18827946..18828864 652..1570 4595 100 Plus
2L 23513712 2L 18827508..18827886 273..651 1895 100 Plus
2L 23513712 2L 18827002..18827260 17..275 1295 100 Plus
2L 23513712 2L 18825560..18825713 978..1131 245 77.3 Plus
Blast to na_te.dros performed on 2014-11-27 14:35:36 has no hits.

BS10137.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:37:54 Download gff for BS10137.complete
Subject Subject Range Query Range Percent Splice Strand
CG17322-RA 1..1554 17..1570 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:23:21 Download gff for BS10137.complete
Subject Subject Range Query Range Percent Splice Strand
CG17322-RA 51..1612 11..1574 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:42:51 Download gff for BS10137.complete
Subject Subject Range Query Range Percent Splice Strand
CG17322-RD 152..1703 17..1568 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:37:54 Download gff for BS10137.complete
Subject Subject Range Query Range Percent Splice Strand
CG17322-RA 51..1612 11..1574 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:48:45 Download gff for BS10137.complete
Subject Subject Range Query Range Percent Splice Strand
CG17322-RD 152..1703 17..1568 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:48:45 Download gff for BS10137.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18827002..18827259 17..274 100 -> Plus
2L 18827510..18827886 275..651 100 -> Plus
2L 18827946..18828862 652..1568 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:42:51 Download gff for BS10137.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18827510..18827886 275..651 100 -> Plus
arm_2L 18827002..18827259 17..274 100 -> Plus
arm_2L 18827946..18828862 652..1568 100   Plus

BS10137.pep Sequence

Translation from 16 to 1569

> BS10137.pep
MCGCWKVFCLLALLSLVAFSDSLRILGLFPHPAISHFKFFHPIMRGLAEA
GHSVDVISPFEDKDPPNGYKDHLLPPSTLTDTISLEDFERPYSFLFHYVE
FFILHKMGREDCNTTLHSRALTEILKNPPGYYDVILLEQFNTDCAMSVAH
VFQAPVIGMSSCALMPWHYERFGAPLIPSYISALFQGQSQEMSFAGRLGN
WITVHSLNLLYKMFTVPAGNALIRQRFGPGLPSTEDLVRNTSLMLVNQHF
SLSGPKPLPPNVIEVGGVHISPPKPLPSDLQKILDNAPKGVILISWGSQL
KACSLSAARRDGIVKAIGRLEQEVIWKYENDTLPNKPPNLHIRKWLPQRD
ILAHPNLKVFMSHGGLMGTTEAVSSAVPIVGVPIYGDQSLNIAALVQRGM
ALQLELKKLDENTVYEALTKALDPSFKARAKEVASSYNNRIQGPLETAIW
WVEHVAETKGAPLTQPSAVHLSRFVYYSLDVYSVVALSLLLPVITLLGLI
RMFKRREPKGDRKLKRK*

BS10137.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG17322-PB 517 CG17322-PB 1..517 1..517 2713 100 Plus
CG17322-PA 517 CG17322-PA 1..517 1..517 2713 100 Plus
CG17322-PD 517 CG17322-PD 1..517 1..517 2713 100 Plus
CG17322-PC 517 CG17322-PC 1..517 1..517 2713 100 Plus
CG17323-PD 519 CG17323-PD 9..506 7..502 1570 59.8 Plus