Clone Sequence Records
BS10151.3prime Sequence
953 bp (823 high quality bases) assembled on 2006-04-19
> BS10151.3prime
ATGGTCTAGAAAGCTTCTAGTAAATGACGGGATTCGGATCGCGTGGCTTG
CGAGAATACTTTAGGCCCAGATCATCGGCAATCTCGTCTATCGCCTCCAG
GGCAAAGTCCAGCTGCTCCTTGGTGTGGGCGGCTGAAAGGCAGAATCGGA
TGCGTCCTTCCATGATGGGTGTGGCCGGGAATCCAGCTCCCACCGCGGCA
ATGTGGCGAGTCGTCAAGGTGCGAACCACAGCGCCAATCTTGGAAAACAG
GTACACCAGCATGGGCACGACTGGGGAGTCCTCGTGACCGTATGTGATCA
CTCCCAGCTGAGCCAGACGTCGGCGGAAGTAACGTGTGTTCCTGGCCAGC
TGGTGGATCTTCTTGCGTCCAATGTCAGTGCCATCTTCACCCATAATGGT
CTTCATGGAGGTAAGGATTTGCTGTGCGATGGGTGGCGAGATCGAAGCAG
CATAACAATGGGCGTGGCTGTTGGTGCGGAGAAAGTCAATCAGTTTCTTG
GATCCAGCGAGATAGCCTCCAGCACTGCCAAAACTTTTGGTGAAGGTGCC
CATCAGAATGTCCACCTCCTTCGGATCCACATTAAAATAATCTGTAACTC
CTCGTCCACGGGAACCCATGGCTCCCACGCTGTGAGCTTCATCCAAATAC
AAGTATGCTTTGTATTTCTTTTTCAGAGCAATAACCTCGGGCAAACGGAC
TATGGACCCCTCCATGCTGAAGATGCCCTCGACCAAGATCATAACCTTGT
CCCATGGCTGACCACCTTTTTTGGGATTTCCATAGCACACACCCTGACGG
AGGACGCGCTCCAGATCGCGCATGTTGTTGTGCTTTAAGACCTTGGTGGT
GGCCCCCGGACAACGCAGTCCCAAAATGATGGAGGCGTGATTCTTTTCGT
CACTAATCACAAGACTGTTGGGTCCCAGCAGTGAGGGGAGGTTCAACGCA
TTT
BS10151.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:42:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4162-PA | 1794 | lace-RA | 955..1794 | 856..17 | 4175 | 99.8 | Minus |
CG4162-PA | 1794 | lace-RA | 858..949 | 953..862 | 435 | 98.9 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 16:54:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lace-RB | 2564 | CG4162-RB | 952..1890 | 953..15 | 4620 | 99.6 | Minus |
lace-RA | 2991 | CG4162-RA | 952..1890 | 953..15 | 4620 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 16:54:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15502770..15503226 | 953..497 | 2195 | 98.7 | Minus |
2L | 23513712 | 2L | 15503289..15503553 | 498..234 | 1325 | 100 | Minus |
2L | 23513712 | 2L | 15503698..15503917 | 234..15 | 1100 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 16:54:42 has no hits.
BS10151.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:30:58 Download gff for
BS10151.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4162-PA | 858..1794 | 17..953 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:48:48 Download gff for
BS10151.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4162-PA | 858..1794 | 17..953 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:28:15 Download gff for
BS10151.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lace-RA | 952..1890 | 15..953 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:22:32 Download gff for
BS10151.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lace-RA | 952..1890 | 15..953 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:22:32 Download gff for
BS10151.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15502770..15503226 | 497..953 | 99 | -> | Minus |
2L | 15503291..15503553 | 234..496 | 100 | -> | Minus |
2L | 15503699..15503917 | 15..233 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:28:15 Download gff for
BS10151.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15502770..15503226 | 497..953 | 99 | -> | Minus |
arm_2L | 15503291..15503553 | 234..496 | 100 | -> | Minus |
arm_2L | 15503699..15503917 | 15..233 | 100 | | Minus |
BS10151.5prime Sequence
854 bp (832 high quality bases) assembled on 2006-04-19
> BS10151.5prime
GAAGTTATCAGTCGACATGGGCAATTTCGACGGCGATTCTGGAACGGTTT
TCGAGCAGAGCTATGCGACGACCAACGGAAACGGAAAGGTGCCGAATGGC
AATGGGGCGGCAGATCTCAGTGCCCCGGAAAAACAGGAACTTCTCCGGAA
GTTCTCGGCACCCGCGTACACTGAAATTCGCACGCGACGCTGCCAGCCGA
AGCCCGCAAACGACGCCCAGAGTCCCAGCTCGATCAACTACCATCCGGAA
AAGAAGTCGATCCCCAATGGGCATGCCTCCATTCTGGATCAGGAGTCCAA
GCCCAACCAGGCAGAGGGCAAACTTTCGCCGGAGCTGGAGCACTTCCAGA
AAACCTCCTTTGAGGAGGTGCCTTTGCACACGGCCTGCCTTACGTATTTG
GGATTCTATCTACTGATGATCCTGGGCTACATCAACCAGTTGCTCTTCGT
GCCCAAAGTGGCCACCGAGAAGGGTCGGGATGGCTATGTAGCCCTCTACG
ATGCCTTCGAAAGCTTCTACTCGAGGTACGTTTACAGGAGAATCAAGGAT
TGCTGGAACCGACCCATCTGCAGTGTTCCGGGAGACGAACTCACTCTAAA
GGATCGCGTAACCGATGATTATGGATGGAGTTTCAAGTTCACTGGAACGG
AGACACGTTGCTTAAATCTGGGATCCTACAATTACCTGGGATTTGCCGCC
GCTACTGGACAGTGTGCTGATGATTCAGAGGAAAGTGCTCGGAGCTCTGG
ACTGGCATACTGCAGCTCCCGTTGTGAGCTTGGTGACAACGAGCAGCTGC
AAGAGCTGGAGGCTCTAACTGCCAGATACTTTGGCGTGGAGGATGCCATT
GTCT
BS10151.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:42:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4162-PA | 1794 | lace-RA | 1..838 | 17..854 | 4190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:28:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lace-RB | 2564 | CG4162-RB | 95..932 | 17..854 | 4190 | 100 | Plus |
lace-RA | 2991 | CG4162-RA | 95..932 | 17..854 | 4190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:28:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15502114..15502750 | 218..854 | 3185 | 100 | Plus |
2L | 23513712 | 2L | 15499221..15499424 | 17..220 | 1020 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 09:28:04 has no hits.
BS10151.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:30:59 Download gff for
BS10151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4162-PA | 1..838 | 17..854 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:48:50 Download gff for
BS10151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4162-PA | 1..838 | 17..854 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:43:59 Download gff for
BS10151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lace-RA | 95..932 | 17..854 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:56:43 Download gff for
BS10151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lace-RA | 95..932 | 17..854 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 13:56:43 Download gff for
BS10151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15499221..15499424 | 17..220 | 100 | -> | Plus |
2L | 15502117..15502750 | 221..854 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:43:59 Download gff for
BS10151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15499221..15499424 | 17..220 | 100 | -> | Plus |
arm_2L | 15502117..15502750 | 221..854 | 100 | | Plus |
BS10151.complete Sequence
1826 bp assembled on 2010-05-10
GenBank Submission: KX803198
> BS10151.complete
GAAGTTATCAGTCGACATGGGCAATTTCGACGGCGATTCTGGAACGGTTT
TCGAGCAGAGCTATGCGACGACCAACGGAAACGGAAAGGTGCCGAATGGC
AATGGGGCGGCAGATCTCAGTGCCCCGGAAAAACAGGAACTTCTCCGGAA
GTTCTCGGCACCCGCGTACACTGAAATTCGCACGCGACGCTGCCAGCCGA
AGCCCGCAAACGACGCCCAGAGTCCCAGCTCGATCAACTACCATCCGGAA
AAGAAGTCGATCCCCAATGGGCATGCCTCCATTCTGGATCAGGAGTCCAA
GCCCAACCAGGCAGAGGGCAAACTTTCGCCGGAGCTGGAGCACTTCCAGA
AAACCTCCTTTGAGGAGGTGCCTTTGCACACGGCCTGCCTTACGTATTTG
GGATTCTATCTACTGATGATCCTGGGCTACATCAACCAGTTGCTCTTCGT
GCCCAAAGTGGCCACCGAGAAGGGTCGGGATGGCTATGTAGCCCTCTACG
ATGCCTTCGAAAGCTTCTACTCGAGGTACGTTTACAGGAGAATCAAGGAT
TGCTGGAACCGACCCATCTGCAGTGTTCCGGGAGACGAACTCACTCTAAA
GGATCGCGTAACCGATGATTATGGATGGAGTTTCAAGTTCACTGGAACGG
AGACACGTTGCTTAAATCTGGGATCCTACAATTACCTGGGATTTGCCGCC
GCTACTGGACAGTGTGCTGATGATTCAGAGGAAAGTGCTCGGAGCTCTGG
ACTGGCATACTGCAGCTCCCGTTGTGAGCTTGGTGACAACGAGCAGCTGC
AAGAGCTGGAGGCTCTAACTGCCAGATACTTTGGCGTGGAGGATGCCATT
GTCTTTGGAATGGGTTTCGCCACAAATGCGTTGAACCTTCCCTCACTGCT
GGGACCCAACAGTCTTGTGATTAGTGACGAAAAGAATCACGCCTCCATCA
TTTTGGGACTGCGTTTGTCCGGGGCCACCACCAAGGTCTTTAAGCACAAC
AACATGCGCGATCTGGAGCGCGTCCTCCGTCAGGGTGTGTGCTATGGAAA
TCCCAAAAAAGGTGGTCAGCCATGGGACAAGGTTATGATCTTGGTCGAGG
GCATCTTCAGCATGGAGGGGTCCATAGTCCGTTTGCCCGAGGTTATTGCT
CTGAAAAAGAAATACAAAGCATACTTGTATTTGGATGAAGCTCACAGCGT
GGGAGCCATGGGTTCCCGTGGACGAGGAGTTACAGATTATTTTAATGTGG
ATCCGAAGGAGGTGGACATTCTGATGGGCACCTTCACCAAAAGTTTTGGC
AGTGCTGGAGGCTATCTCGCTGGATCCAAGAAACTGATTGACTTTCTCCG
CACCAACAGCCACGCCCATTGTTATGCTGCTTCGATCTCGCCACCCATCG
CACAGCAAATCCTTACCTCCATGAAGACCATTATGGGTGAAGATGGCACT
GACATTGGACGCAAGAAGATCCACCAGCTGGCCAGGAACACACGTTACTT
CCGCCGACGTCTGGCTCAGCTGGGAGTGATCACATACGGTCACGAGGACT
CCCCAGTCGTGCCCATGCTGGTGTACCTGTTTTCCAAGATTGGCGCTGTG
GTTCGCACCTTGACGACTCGCCACATTGCCGCGGTGGGAGCTGGATTCCC
GGCCACACCCATCATGGAAGGACGCATCCGATTCTGCCTTTCAGCCGCCC
ACACCAAGGAGCAGCTGGACTTTGCCCTGGAGGCGATAGACGAGATTGCC
GATGATCTGGGCCTAAAGTATTCTCGCAAGCCACGCGATCCGAATCCCGT
CATTTACTAGAAGCTTTCTAGACCAT
BS10151.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:57:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lace-RB | 1794 | CG4162-PB | 1..1794 | 17..1810 | 8970 | 100 | Plus |
lace-RA | 1794 | CG4162-PA | 1..1794 | 17..1810 | 8970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:57:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lace-RB | 2564 | CG4162-RB | 95..1890 | 17..1812 | 8980 | 100 | Plus |
lace-RA | 2991 | CG4162-RA | 95..1890 | 17..1812 | 8980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:57:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15502114..15503226 | 218..1330 | 5565 | 100 | Plus |
2L | 23513712 | 2L | 15503289..15503553 | 1329..1593 | 1325 | 100 | Plus |
2L | 23513712 | 2L | 15503698..15503917 | 1593..1812 | 1100 | 100 | Plus |
2L | 23513712 | 2L | 15499221..15499424 | 17..220 | 1020 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:57:44 has no hits.
BS10151.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-10 11:55:55 Download gff for
BS10151.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lace-RA | 112..1905 | 17..1810 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:06:49 Download gff for
BS10151.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lace-RA | 95..1888 | 17..1810 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:20 Download gff for
BS10151.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lace-RA | 95..1888 | 17..1810 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:20 Download gff for
BS10151.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15499221..15499424 | 17..220 | 100 | -> | Plus |
2L | 15502117..15503226 | 221..1330 | 100 | -> | Plus |
2L | 15503291..15503553 | 1331..1593 | 100 | -> | Plus |
2L | 15503699..15503915 | 1594..1810 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:06:49 Download gff for
BS10151.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15499221..15499424 | 17..220 | 100 | -> | Plus |
arm_2L | 15502117..15503226 | 221..1330 | 100 | -> | Plus |
arm_2L | 15503291..15503553 | 1331..1593 | 100 | -> | Plus |
arm_2L | 15503699..15503915 | 1594..1810 | 100 | | Plus |
BS10151.pep Sequence
Translation from 16 to 1809
> BS10151.pep
MGNFDGDSGTVFEQSYATTNGNGKVPNGNGAADLSAPEKQELLRKFSAPA
YTEIRTRRCQPKPANDAQSPSSINYHPEKKSIPNGHASILDQESKPNQAE
GKLSPELEHFQKTSFEEVPLHTACLTYLGFYLLMILGYINQLLFVPKVAT
EKGRDGYVALYDAFESFYSRYVYRRIKDCWNRPICSVPGDELTLKDRVTD
DYGWSFKFTGTETRCLNLGSYNYLGFAAATGQCADDSEESARSSGLAYCS
SRCELGDNEQLQELEALTARYFGVEDAIVFGMGFATNALNLPSLLGPNSL
VISDEKNHASIILGLRLSGATTKVFKHNNMRDLERVLRQGVCYGNPKKGG
QPWDKVMILVEGIFSMEGSIVRLPEVIALKKKYKAYLYLDEAHSVGAMGS
RGRGVTDYFNVDPKEVDILMGTFTKSFGSAGGYLAGSKKLIDFLRTNSHA
HCYAASISPPIAQQILTSMKTIMGEDGTDIGRKKIHQLARNTRYFRRRLA
QLGVITYGHEDSPVVPMLVYLFSKIGAVVRTLTTRHIAAVGAGFPATPIM
EGRIRFCLSAAHTKEQLDFALEAIDEIADDLGLKYSRKPRDPNPVIY*
BS10151.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:19:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lace-PB | 597 | CG4162-PB | 1..597 | 1..597 | 3124 | 100 | Plus |
lace-PA | 597 | CG4162-PA | 1..597 | 1..597 | 3124 | 100 | Plus |
CG10361-PA | 417 | CG10361-PA | 49..413 | 198..581 | 451 | 30.4 | Plus |
Spt-I-PC | 468 | CG4016-PC | 96..467 | 215..581 | 408 | 29.6 | Plus |
Spt-I-PA | 468 | CG4016-PA | 96..467 | 215..581 | 408 | 29.6 | Plus |