Clone Sequence Records
BS10169.3prime Sequence
882 bp (815 high quality bases) assembled on 2006-04-19
> BS10169.3prime
ATGGTCTAGAAAGCTTCTAAACATCACTGTCTGATTGGCAAATGAAATGC
ATAACGTCAGTGGTACAGGACAGAACGATCATAATGTTTTCGTGCCCAAA
AACGTAGGCGCAGTGCTGGGTAGGATTATTGTATTTGGGTTCATTTTTGC
GCCACTTGAAGTAGGTAGCTCGTTTGCCGGAGGCCAAGGATATAAACTCG
CCCTGCTTGGCCAGATCGTTGACACCCAGCCAGTAGTTCGCCTTGTTCAA
TTGGCCCACTATGGCGTTGTATTCCTCGGCATTTTGGAATGCTGCGAGGT
GGCCGCCCATTTCAATGCACCTCTGCTCGGCGGTCCTCCAGTTCACCTGT
AAGTTGTGTTCGATGTAGAAATATCTCGATCCTATCTGTTGATATCTCTG
CAGCACGAGTTTCCTTTCGATATCGGATAGAGTCTTCTGGATGGCTGTCA
ACTGGTTTTCCGTCCTCTTCTGTCCATCTTTCAACTGATTACTCAGCGCT
GTCTGATTGCCTTCGATATCCTTTAGTTTTTGCTCAAGGTCCTCGGTTTT
GATTGCCTTCGAAATGTTGTTCACAAGGAATGCTTGCTGGGCTTCTATTT
GGATTTGTGTCGCCGTCAACTGGTCTTCGATCTTATCCAGTTTCGCGACG
CTTCCATTAAGTTTCACCTCGCAGGCTCCCCAGTCCTGTTGCTCCTTCGA
AAGGTGATCGATGACCGGCTGCAGTGCGGATACGCAATATTCACTGCACT
GATTGGGAGGATCTGATAATAGACACACATAGCGCCTGCCCTCCTGGGCT
TCTATCAGGGATCCGTAAGGATACAGCAATAGAAATGCGCACAAAATAAT
TCTCGTAAAGCTAAACATGTCGACTGATAACT
BS10169.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:43:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-PA | 852 | CG15818-RA | 1..852 | 868..17 | 4235 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:31:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-RA | 1321 | CG15818-RA | 47..898 | 868..17 | 4245 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:31:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7410955..7411806 | 868..17 | 4245 | 99.9 | Minus |
2L | 23513712 | 2L | 7399552..7399667 | 775..660 | 220 | 79.3 | Minus |
Blast to na_te.dros performed on 2015-02-12 01:31:26 has no hits.
BS10169.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:31:34 Download gff for
BS10169.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-PA | 1..852 | 17..868 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:49:35 Download gff for
BS10169.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-PA | 1..852 | 17..868 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 15:47:03 Download gff for
BS10169.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 47..901 | 10..868 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:23:14 Download gff for
BS10169.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 47..901 | 10..868 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:23:14 Download gff for
BS10169.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7410955..7411801 | 22..868 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 15:47:03 Download gff for
BS10169.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7410955..7411801 | 22..868 | 99 | <- | Minus |
BS10169.5prime Sequence
882 bp (792 high quality bases) assembled on 2006-04-19
> BS10169.5prime
GAAGTTATCAGTCGACATGTTTAGCTCTACGAGAATTATTTTGTGCGCAT
TTCTATTGCTGTATCCTTACGGATCCCTGATAGAAGCCCAGGAGGGCAGG
CGCTATGTGTGTCTATTATCAGATCCTCCCAATCAGTGCAGTGAATATTG
CGTATCCGCACTGCAGCCGGTCATCGATCACCTTTCGAAGGAGCAACAGG
ACTGGGGAGCCTGCGAGGTGAAACTTAATGGAAGCGTCGCGAAACTGGAT
AAGATCGAAGACCAGTTGACGGCGACACAAATCCAAATAGAAGCCCAGCA
AGCATTCCTTGTGAACAACATTTCGAAGGCAATCAAAACCGAGGACCTTG
AGCAAAAACTAAAGGATATCGAAGGCAATCAGACAGCGCTGAGTAATCAG
TTGAAAGATGGACAGAAGAGGACGGAAAACCAGTTGACAGCCATCCAGAA
GACTCTATCCGATATCGAAAGGAAACTCGTGCTGCAGAGATATCAACAGA
TAGGATCGAGATATTTCTACATCGAACACAACTTACAGGTGAACTGGAGG
ACCGCCGAGCAGAGGTGCATTGAAATGGGCGGCCACCTCGCAGCATTCCA
AAATGCCGAGGAATACAACGCCATAGTGGGCCAATTGAACAAGGCGAACT
ACTGGCTGGGTGTCAACGATCTGGCCAAGCAGGGCGAGTTTATATCCTTG
GCCTCCGGCAAACGAGCTACCTACTTCAAGTGGCGCAAAAATGAACCCAA
ATACAATAATCCTACCCAGCACTGCGCCTACGTTTTTGGGCACGAAAACA
TTATGATCGTTCTGTCCTGTACCACTGACGTTATGCATTTCATTTGCCAA
TCAGACAGTGATGTTTAGAAACTTTCTAGACC
BS10169.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:43:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-PA | 852 | CG15818-RA | 1..852 | 17..868 | 4260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:33:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-RA | 1321 | CG15818-RA | 47..898 | 17..868 | 4260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:33:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7410955..7411806 | 17..868 | 4260 | 100 | Plus |
2L | 23513712 | 2L | 7399552..7399667 | 110..225 | 220 | 79.3 | Plus |
Blast to na_te.dros performed on 2015-02-13 00:33:45 has no hits.
BS10169.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:31:35 Download gff for
BS10169.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-PA | 1..852 | 17..868 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:49:37 Download gff for
BS10169.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-PA | 1..852 | 17..868 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:00:07 Download gff for
BS10169.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 47..901 | 17..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:46:43 Download gff for
BS10169.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 47..901 | 17..875 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:46:43 Download gff for
BS10169.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7410955..7411809 | 17..875 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:00:07 Download gff for
BS10169.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7410955..7411809 | 17..875 | 99 | | Plus |
BS10169.complete Sequence
884 bp (884 high quality bases) assembled on 2006-03-25
GenBank Submission: FJ636581
> BS10169.complete
GAAGTTATCAGTCGACATGTTTAGCTCTACGAGAATTATTTTGTGCGCAT
TTCTATTGCTGTATCCTTACGGATCCCTGATAGAAGCCCAGGAGGGCAGG
CGCTATGTGTGTCTATTATCAGATCCTCCCAATCAGTGCAGTGAATATTG
CGTATCCGCACTGCAGCCGGTCATCGATCACCTTTCGAAGGAGCAACAGG
ACTGGGGAGCCTGCGAGGTGAAACTTAATGGAAGCGTCGCGAAACTGGAT
AAGATCGAAGACCAGTTGACGGCGACACAAATCCAAATAGAAGCCCAGCA
AGCATTCCTTGTGAACAACATTTCGAAGGCAATCAAAACCGAGGACCTTG
AGCAAAAACTAAAGGATATCGAAGGCAATCAGACAGCGCTGAGTAATCAG
TTGAAAGATGGACAGAAGAGGACGGAAAACCAGTTGACAGCCATCCAGAA
GACTCTATCCGATATCGAAAGGAAACTCGTGCTGCAGAGATATCAACAGA
TAGGATCGAGATATTTCTACATCGAACACAACTTACAGGTGAACTGGAGG
ACCGCCGAGCAGAGGTGCATTGAAATGGGCGGCCACCTCGCAGCATTCCA
AAATGCCGAGGAATACAACGCCATAGTGGGCCAATTGAACAAGGCGAACT
ACTGGCTGGGTGTCAACGATCTGGCCAAGCAGGGCGAGTTTATATCCTTG
GCCTCCGGCAAACGAGCTACCTACTTCAAGTGGCGCAAAAATGAACCCAA
ATACAATAATCCTACCCAGCACTGCGCCTACGTTTTTGGGCACGAAAACA
TTATGATCGTTCTGTCCTGTACCACTGACGTTATGCATTTCATTTGCCAA
TCAGACAGTGATGTTTAGAAGCTTTCTAGACCAT
BS10169.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:57:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-RA | 852 | CG15818-PA | 1..852 | 17..868 | 4260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:57:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-RA | 1321 | CG15818-RA | 47..898 | 17..868 | 4260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:57:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7410955..7411806 | 17..868 | 4260 | 100 | Plus |
2L | 23513712 | 2L | 7399552..7399667 | 110..225 | 220 | 79.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:57:10 has no hits.
BS10169.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:37:52 Download gff for
BS10169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 1..852 | 17..868 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:23:17 Download gff for
BS10169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 22..876 | 17..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:27 Download gff for
BS10169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 53..898 | 23..868 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:37:52 Download gff for
BS10169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 22..876 | 17..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:06:42 Download gff for
BS10169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 53..898 | 23..868 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:06:42 Download gff for
BS10169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7410961..7411806 | 23..868 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:27 Download gff for
BS10169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7410961..7411806 | 23..868 | 100 | | Plus |
BS10169.pep Sequence
Translation from 16 to 867
> BS10169.pep
MFSSTRIILCAFLLLYPYGSLIEAQEGRRYVCLLSDPPNQCSEYCVSALQ
PVIDHLSKEQQDWGACEVKLNGSVAKLDKIEDQLTATQIQIEAQQAFLVN
NISKAIKTEDLEQKLKDIEGNQTALSNQLKDGQKRTENQLTAIQKTLSDI
ERKLVLQRYQQIGSRYFYIEHNLQVNWRTAEQRCIEMGGHLAAFQNAEEY
NAIVGQLNKANYWLGVNDLAKQGEFISLASGKRATYFKWRKNEPKYNNPT
QHCAYVFGHENIMIVLSCTTDVMHFICQSDSDV*
BS10169.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:25:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-PA | 283 | CG15818-PA | 1..283 | 1..283 | 1483 | 100 | Plus |
lectin-28C-PC | 265 | CG7106-PC | 1..265 | 1..283 | 445 | 36.8 | Plus |
lectin-28C-PB | 265 | CG7106-PB | 1..265 | 1..283 | 445 | 36.8 | Plus |
CG15358-PC | 229 | CG15358-PC | 4..226 | 31..282 | 397 | 34.4 | Plus |
CG15358-PB | 229 | CG15358-PB | 4..226 | 31..282 | 397 | 34.4 | Plus |