Clone BS10169 Report

Search the DGRC for BS10169

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:101
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG15818-RA
Protein status:BS10169.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS10169.3prime Sequence

882 bp (815 high quality bases) assembled on 2006-04-19

> BS10169.3prime
ATGGTCTAGAAAGCTTCTAAACATCACTGTCTGATTGGCAAATGAAATGC
ATAACGTCAGTGGTACAGGACAGAACGATCATAATGTTTTCGTGCCCAAA
AACGTAGGCGCAGTGCTGGGTAGGATTATTGTATTTGGGTTCATTTTTGC
GCCACTTGAAGTAGGTAGCTCGTTTGCCGGAGGCCAAGGATATAAACTCG
CCCTGCTTGGCCAGATCGTTGACACCCAGCCAGTAGTTCGCCTTGTTCAA
TTGGCCCACTATGGCGTTGTATTCCTCGGCATTTTGGAATGCTGCGAGGT
GGCCGCCCATTTCAATGCACCTCTGCTCGGCGGTCCTCCAGTTCACCTGT
AAGTTGTGTTCGATGTAGAAATATCTCGATCCTATCTGTTGATATCTCTG
CAGCACGAGTTTCCTTTCGATATCGGATAGAGTCTTCTGGATGGCTGTCA
ACTGGTTTTCCGTCCTCTTCTGTCCATCTTTCAACTGATTACTCAGCGCT
GTCTGATTGCCTTCGATATCCTTTAGTTTTTGCTCAAGGTCCTCGGTTTT
GATTGCCTTCGAAATGTTGTTCACAAGGAATGCTTGCTGGGCTTCTATTT
GGATTTGTGTCGCCGTCAACTGGTCTTCGATCTTATCCAGTTTCGCGACG
CTTCCATTAAGTTTCACCTCGCAGGCTCCCCAGTCCTGTTGCTCCTTCGA
AAGGTGATCGATGACCGGCTGCAGTGCGGATACGCAATATTCACTGCACT
GATTGGGAGGATCTGATAATAGACACACATAGCGCCTGCCCTCCTGGGCT
TCTATCAGGGATCCGTAAGGATACAGCAATAGAAATGCGCACAAAATAAT
TCTCGTAAAGCTAAACATGTCGACTGATAACT

BS10169.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:43:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-PA 852 CG15818-RA 1..852 868..17 4235 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:31:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-RA 1321 CG15818-RA 47..898 868..17 4245 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:31:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7410955..7411806 868..17 4245 99.9 Minus
2L 23513712 2L 7399552..7399667 775..660 220 79.3 Minus
Blast to na_te.dros performed on 2015-02-12 01:31:26 has no hits.

BS10169.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:31:34 Download gff for BS10169.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-PA 1..852 17..868 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:49:35 Download gff for BS10169.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-PA 1..852 17..868 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 15:47:03 Download gff for BS10169.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 47..901 10..868 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:23:14 Download gff for BS10169.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 47..901 10..868 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:23:14 Download gff for BS10169.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 7410955..7411801 22..868 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 15:47:03 Download gff for BS10169.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7410955..7411801 22..868 99 <- Minus

BS10169.5prime Sequence

882 bp (792 high quality bases) assembled on 2006-04-19

> BS10169.5prime
GAAGTTATCAGTCGACATGTTTAGCTCTACGAGAATTATTTTGTGCGCAT
TTCTATTGCTGTATCCTTACGGATCCCTGATAGAAGCCCAGGAGGGCAGG
CGCTATGTGTGTCTATTATCAGATCCTCCCAATCAGTGCAGTGAATATTG
CGTATCCGCACTGCAGCCGGTCATCGATCACCTTTCGAAGGAGCAACAGG
ACTGGGGAGCCTGCGAGGTGAAACTTAATGGAAGCGTCGCGAAACTGGAT
AAGATCGAAGACCAGTTGACGGCGACACAAATCCAAATAGAAGCCCAGCA
AGCATTCCTTGTGAACAACATTTCGAAGGCAATCAAAACCGAGGACCTTG
AGCAAAAACTAAAGGATATCGAAGGCAATCAGACAGCGCTGAGTAATCAG
TTGAAAGATGGACAGAAGAGGACGGAAAACCAGTTGACAGCCATCCAGAA
GACTCTATCCGATATCGAAAGGAAACTCGTGCTGCAGAGATATCAACAGA
TAGGATCGAGATATTTCTACATCGAACACAACTTACAGGTGAACTGGAGG
ACCGCCGAGCAGAGGTGCATTGAAATGGGCGGCCACCTCGCAGCATTCCA
AAATGCCGAGGAATACAACGCCATAGTGGGCCAATTGAACAAGGCGAACT
ACTGGCTGGGTGTCAACGATCTGGCCAAGCAGGGCGAGTTTATATCCTTG
GCCTCCGGCAAACGAGCTACCTACTTCAAGTGGCGCAAAAATGAACCCAA
ATACAATAATCCTACCCAGCACTGCGCCTACGTTTTTGGGCACGAAAACA
TTATGATCGTTCTGTCCTGTACCACTGACGTTATGCATTTCATTTGCCAA
TCAGACAGTGATGTTTAGAAACTTTCTAGACC

BS10169.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:43:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-PA 852 CG15818-RA 1..852 17..868 4260 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-RA 1321 CG15818-RA 47..898 17..868 4260 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:33:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7410955..7411806 17..868 4260 100 Plus
2L 23513712 2L 7399552..7399667 110..225 220 79.3 Plus
Blast to na_te.dros performed on 2015-02-13 00:33:45 has no hits.

BS10169.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:31:35 Download gff for BS10169.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-PA 1..852 17..868 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:49:37 Download gff for BS10169.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-PA 1..852 17..868 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:00:07 Download gff for BS10169.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 47..901 17..875 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:46:43 Download gff for BS10169.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 47..901 17..875 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:46:43 Download gff for BS10169.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 7410955..7411809 17..875 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:00:07 Download gff for BS10169.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7410955..7411809 17..875 99   Plus

BS10169.complete Sequence

884 bp (884 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ636581

> BS10169.complete
GAAGTTATCAGTCGACATGTTTAGCTCTACGAGAATTATTTTGTGCGCAT
TTCTATTGCTGTATCCTTACGGATCCCTGATAGAAGCCCAGGAGGGCAGG
CGCTATGTGTGTCTATTATCAGATCCTCCCAATCAGTGCAGTGAATATTG
CGTATCCGCACTGCAGCCGGTCATCGATCACCTTTCGAAGGAGCAACAGG
ACTGGGGAGCCTGCGAGGTGAAACTTAATGGAAGCGTCGCGAAACTGGAT
AAGATCGAAGACCAGTTGACGGCGACACAAATCCAAATAGAAGCCCAGCA
AGCATTCCTTGTGAACAACATTTCGAAGGCAATCAAAACCGAGGACCTTG
AGCAAAAACTAAAGGATATCGAAGGCAATCAGACAGCGCTGAGTAATCAG
TTGAAAGATGGACAGAAGAGGACGGAAAACCAGTTGACAGCCATCCAGAA
GACTCTATCCGATATCGAAAGGAAACTCGTGCTGCAGAGATATCAACAGA
TAGGATCGAGATATTTCTACATCGAACACAACTTACAGGTGAACTGGAGG
ACCGCCGAGCAGAGGTGCATTGAAATGGGCGGCCACCTCGCAGCATTCCA
AAATGCCGAGGAATACAACGCCATAGTGGGCCAATTGAACAAGGCGAACT
ACTGGCTGGGTGTCAACGATCTGGCCAAGCAGGGCGAGTTTATATCCTTG
GCCTCCGGCAAACGAGCTACCTACTTCAAGTGGCGCAAAAATGAACCCAA
ATACAATAATCCTACCCAGCACTGCGCCTACGTTTTTGGGCACGAAAACA
TTATGATCGTTCTGTCCTGTACCACTGACGTTATGCATTTCATTTGCCAA
TCAGACAGTGATGTTTAGAAGCTTTCTAGACCAT

BS10169.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:57:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-RA 852 CG15818-PA 1..852 17..868 4260 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:57:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-RA 1321 CG15818-RA 47..898 17..868 4260 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:57:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7410955..7411806 17..868 4260 100 Plus
2L 23513712 2L 7399552..7399667 110..225 220 79.3 Plus
Blast to na_te.dros performed on 2014-11-27 15:57:10 has no hits.

BS10169.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:37:52 Download gff for BS10169.complete
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 1..852 17..868 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:23:17 Download gff for BS10169.complete
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 22..876 17..875 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:27 Download gff for BS10169.complete
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 53..898 23..868 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:37:52 Download gff for BS10169.complete
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 22..876 17..875 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:06:42 Download gff for BS10169.complete
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 53..898 23..868 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:06:42 Download gff for BS10169.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7410961..7411806 23..868 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:27 Download gff for BS10169.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7410961..7411806 23..868 100   Plus

BS10169.pep Sequence

Translation from 16 to 867

> BS10169.pep
MFSSTRIILCAFLLLYPYGSLIEAQEGRRYVCLLSDPPNQCSEYCVSALQ
PVIDHLSKEQQDWGACEVKLNGSVAKLDKIEDQLTATQIQIEAQQAFLVN
NISKAIKTEDLEQKLKDIEGNQTALSNQLKDGQKRTENQLTAIQKTLSDI
ERKLVLQRYQQIGSRYFYIEHNLQVNWRTAEQRCIEMGGHLAAFQNAEEY
NAIVGQLNKANYWLGVNDLAKQGEFISLASGKRATYFKWRKNEPKYNNPT
QHCAYVFGHENIMIVLSCTTDVMHFICQSDSDV*

BS10169.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:25:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-PA 283 CG15818-PA 1..283 1..283 1483 100 Plus
lectin-28C-PC 265 CG7106-PC 1..265 1..283 445 36.8 Plus
lectin-28C-PB 265 CG7106-PB 1..265 1..283 445 36.8 Plus
CG15358-PC 229 CG15358-PC 4..226 31..282 397 34.4 Plus
CG15358-PB 229 CG15358-PB 4..226 31..282 397 34.4 Plus