Clone Sequence Records
BS10183.3prime Sequence
905 bp (838 high quality bases) assembled on 2006-04-19
> BS10183.3prime
ATGGTCTAGAAAGCTTCTAAGAACAGCTGCAACCCTCGACAGACATATTT
GGTATAACACTTAAAACCAGATTATGGTTATCGTCAAAATATAACAAACT
TAAGGAACTCATTTTTGTCGGCGAGCAACACGGTGTGGCCGATGTCGTTA
AGGCTGCTAAATGTGTATGGGGATATTGCTCTAGGTAACCAACTTTGCAG
TCACCACTGCAGAAGTATGCGTCAAAGGACGTTGGTGCTACAACGAAATG
CCATCCAAAGCTGGTGAAATTAACTTTGAGGGGATATCGACAACAGCGCA
TGTCATGATCATTTTCTGTGCAGTCCATATATACGCTGCGCTTTCTTCGA
TGCTTTTTTTGCGACCCAATTTCTATGTGAACAGTCAATGGATTTTTCGA
TGTGTTGTCTGTGGTCACCACTAATGACTTCATCCAGGTTTCTGCGCCCT
TTATTAGAATTTCTTGCGTCATATTAGACCCAAGATTACCAAGCAGAGAC
TTTAAGTCCACAGCAACCCATTGTCCAAGTCCTGACGGAATACTATGTCG
AAACTCAAACATTTTGACTTTAGGATTAAAGCTTGTTGTATTTGCAACCC
TAATAGCGCGGTGAATAGTCACAACAATATCTTTACGTGGCTGTTTTTTA
ATTTCTTCAAGAAGTCCAGGTTGATGAGCACTTATCCAATCCCAACCACG
TAAATATAGATGAAGGGTAGCGTAAGACAAGTCTGAGTAGCTACTGTCAA
TTTGAAACCGAAAAACATCGACCTTGCGATTGTGCCGAACATGAGGTTGA
ATTTCCTCGGGAAATATGTATATACTGCTGATGTGAGACAAAATACTCTC
GTACTCCTCATCGTTGGTATTAATAGGAATGTCCGACTTTTTAGCTTGAT
TTTTA
BS10183.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:43:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1838-PA | 1797 | myoglianin-RA | 909..1797 | 905..17 | 4445 | 100 | Minus |
| CG1838-PB | 1797 | myoglianin-RB | 909..1797 | 905..17 | 4445 | 100 | Minus |
| CG1838-PC | 1797 | myoglianin-RC | 909..1797 | 905..17 | 4445 | 100 | Minus |
| CG1838-PD | 1797 | myoglianin-RD | 909..1797 | 905..17 | 4445 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 02:16:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| myo-RD | 3612 | CG1838-RD | 1419..2307 | 905..17 | 4445 | 100 | Minus |
| myo-RC | 3056 | CG1838-RC | 1778..2666 | 905..17 | 4445 | 100 | Minus |
| myo-RA | 2896 | CG1838-RA | 1295..2183 | 905..17 | 4445 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 02:16:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 692425..692844 | 386..805 | 2100 | 100 | Plus |
| 4 | 1348131 | 4 | 691991..692360 | 17..386 | 1850 | 100 | Plus |
| 4 | 1348131 | 4 | 693381..693481 | 805..905 | 505 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 02:16:38 has no hits.
BS10183.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:32:04 Download gff for
BS10183.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1838-PD | 910..1797 | 17..904 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:50:15 Download gff for
BS10183.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1838-PD | 910..1797 | 17..904 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 07:45:01 Download gff for
BS10183.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 1296..2183 | 17..904 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 05:19:43 Download gff for
BS10183.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 1296..2183 | 17..904 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 05:19:43 Download gff for
BS10183.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 693381..693480 | 805..904 | 100 | | Plus |
| 4 | 691991..692359 | 17..385 | 100 | <- | Plus |
| 4 | 692425..692843 | 386..804 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 07:45:01 Download gff for
BS10183.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 712617..712985 | 17..385 | 100 | <- | Plus |
| arm_4 | 713051..713469 | 386..804 | 100 | <- | Plus |
| arm_4 | 714007..714106 | 805..904 | 100 | | Plus |
BS10183.5prime Sequence
915 bp (835 high quality bases) assembled on 2006-04-19
> BS10183.5prime
GAAGTTATCAGTCGACATGCTGGCCAACTCATGCTGCGGTTGGAGAAAAT
ATAAAACCCATGATCAGCATCATAGAACCCTAAAGAAAAAAACTCGACAG
AACACATCAGATACAACAGTTCACATAGAAGTGAACTCCAACGAAATCCA
GTTTCCAGGTTCTTACAGATTTAATCTTGACTCAAAAAAAATAAATATCG
GGCGAATGAATATTCTTGGACATAAGAGAGGTAATTTCCGTGTAACTCGA
TATGTCACGGTCACCGTACTCTTAATTTTATCGACTGCAGTCAATGCTTA
TGCTCAGCCAGAAAATAAAAGCTTCAGTAATTCTTCCAACAACGATAGTC
CGGAAATGGTTATGTTGAGTAACGAAACAAACAATAGTGCAAAAGTACTA
TCAGAAAAAAATGGTTCTTCTTCAATATCGGCGGATGATAAAATAAATGA
AAATATGGGAATATTCCAAATGAAAGTACAAAGTAAACCGGGGAAAAAAA
GTACCCCTTTAGCAAAGGTATCAGAGCATGGAGATTTATCAAGAGTTCAA
AGTGTATCTTTGTATCGCAATACCTTAATAAATATAGAAAGTATGCTACA
GCGTCAGTTGCGTGAGAAAGCCAAAGTGGATAGTATAGAATCGATTAAAA
TGCACATACTTATGCGCTTGAATTTAAAAAAACTTCCCAATATAACAAAA
CCAATTTCAGTACCACAAAATATAATAGATAACTTTTATAGAGATTATAA
TGCATCTTCAAAAACTACTGTTTGGAATCGCATGGAAAGCATTGACGAAT
CTCATTTGTCTATAAATGACACTTATGGCGACCACATAATGACTGATTTT
TTTGATGAAAGTTCATCCTCCCAAATGCAGGGAGATGATGCTAACACTGT
TAATGAATTTCTGAT
BS10183.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:43:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1838-PA | 1797 | myoglianin-RA | 1..899 | 17..915 | 4495 | 100 | Plus |
| CG1838-PB | 1797 | myoglianin-RB | 1..899 | 17..915 | 4495 | 100 | Plus |
| CG1838-PC | 1797 | myoglianin-RC | 1..899 | 17..915 | 4495 | 100 | Plus |
| CG1838-PD | 1797 | myoglianin-RD | 1..899 | 17..915 | 4495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:24:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| myo-RD | 3612 | CG1838-RD | 510..1409 | 16..915 | 4500 | 100 | Plus |
| myo-RC | 3056 | CG1838-RC | 869..1768 | 16..915 | 4500 | 100 | Plus |
| myo-RA | 2896 | CG1838-RA | 386..1285 | 16..915 | 4500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:24:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 693491..694390 | 915..16 | 4500 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:24:53 has no hits.
BS10183.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:32:05 Download gff for
BS10183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1838-PD | 1..899 | 17..915 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:50:17 Download gff for
BS10183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1838-PD | 1..899 | 17..915 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 13:36:39 Download gff for
BS10183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 386..1285 | 16..915 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:02:05 Download gff for
BS10183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 386..1285 | 16..915 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:02:05 Download gff for
BS10183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 693491..694390 | 16..915 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 13:36:39 Download gff for
BS10183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 714117..715016 | 16..915 | 100 | | Minus |
BS10183.complete Sequence
1829 bp assembled on 2007-10-31
GenBank Submission: FJ636585
> BS10183.complete
GAAGTTATCAGTCGACATGCTGGCCAACTCATGCTGCGGTTGGAGAAAAT
ATAAAACCCATGATCAGCATCATAGAACCCTAAAGAAAAAAACTCGACAG
AACACATCAGATACAACAGTTCACATAGAAGTGAACTCCAACGAAATCCA
GTTTCCAGGTTCTTACAGATTTAATCTTGACTCAAAAAAAATAAATATCG
GGCGAATGAATATTCTTGGACATAAGAGAGGTAATTTCCGTGTAACTCGA
TATGTCACGGTCACCGTACTCTTAATTTTATCGACTGCAGTCAATGCTTA
TGCTCAGCCAGAAAATAAAAGCTTCAGTAATTCTTCCAACAACGATAGTC
CGGAAATGGTTATGTTGAGTAACGAAACAAACAATAGTGCAAAAGTACTA
TCAGAAAAAAATGGTTCTTCTTCAATATCGGCGGATGATAAAATAAATGA
AAATATGGGAATATTCCAAATGAAAGTACAAAGTAAACCGGGGAAAAAAA
GTACCCCTTTAGCAAAGGTATCAGAGCATGGAGATTTATCAAGAGTTCAA
AGTGTATCTTTGTATCGCAATACCTTAATAAATATAGAAAGTATGCTACA
GCGTCAGTTGCGTGAGAAAGCCAAAGTGGATAGTATAGAATCGATTAAAA
TGCACATACTTATGCGCTTGAATTTAAAAAAACTTCCCAATATAACAAAA
CCAATTTCAGTACCACAAAATATAATAGATAACTTTTATAGAGATTATAA
TGCATCTTCAAAAACTACTGTTTGGAATCGCATGGAAAGCATTGACGAAT
CTCATTTGTCTATAAATGACACTTATGGCGACCACATAATGACTGATTTT
TTTGATGAAAGTTCATCCTCCCAAATGCAGGGAGATGATGCTAACACTGT
TAATGAATTTCTGATAGATTTGAATAAAAATCAAGCTAAAAAGTCGGACA
TTCCTATTAATACCAACGATGAGGAGTACGAGAGTATTTTGTCTCACATC
AGCAGTATATACATATTTCCCGAGGAAATTCAACCTCATGTTCGGCACAA
TCGCAAGGTCGATGTTTTTCGGTTTCAAATTGACAGTAGCTACTCAGACT
TGTCTTACGCTACCCTTCATCTATATTTACGTGGTTGGGATTGGATAAGT
GCTCATCAACCTGGACTTCTTGAAGAAATTAAAAAACAGCCACGTAAAGA
TATTGTTGTGACTATTCACCGCGCTATTAGGGTTGCAAATACAACAAGCT
TTAATCCTAAAGTCAAAATGTTTGAGTTTCGACATAGTATTCCGTCAGGA
CTTGGACAATGGGTTGCTGTGGACTTAAAGTCTCTGCTTGGTAATCTTGG
GTCTAATATGACGCAAGAAATTCTAATAAAGGGCGCAGAAACCTGGATGA
AGTCATTAGTGGTGACCACAGACAACACATCGAAAAATCCATTGACTGTT
CACATAGAAATTGGGTCGCAAAAAAAGCATCGAAGAAAGCGCAGCGTATA
TATGGACTGCACAGAAAATGATCATGACATGCGCTGTTGTCGATATCCCC
TCAAAGTTAATTTCACCAGCTTTGGATGGCATTTCGTTGTAGCACCAACG
TCCTTTGACGCATACTTCTGCAGTGGTGACTGCAAAGTTGGTTACCTAGA
GCAATATCCCCATACACATTTAGCAGCCTTAACGACATCGGCCACACCGT
GTTGCTCGCCGACAAAAATGAGTTCCTTAAGTTTGTTATATTTTGACGAT
AACCATAATCTGGTTTTAAGTGTTATACCAAATATGTCTGTCGAGGGTTG
CAGCTGTTCTTAGAAGCTTTCTAGACCAT
BS10183.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:03:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| myo-RD | 1797 | CG1838-PD | 1..1797 | 17..1813 | 8985 | 100 | Plus |
| myo-RC | 1797 | CG1838-PC | 1..1797 | 17..1813 | 8985 | 100 | Plus |
| myo-RA | 1797 | CG1838-PA | 1..1797 | 17..1813 | 8985 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:03:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| myo-RD | 3612 | CG1838-RD | 510..2307 | 16..1813 | 8990 | 100 | Plus |
| myo-RC | 3056 | CG1838-RC | 869..2666 | 16..1813 | 8990 | 100 | Plus |
| myo-RA | 2896 | CG1838-RA | 386..2183 | 16..1813 | 8990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:03:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 693381..694390 | 1025..16 | 5050 | 100 | Minus |
| 4 | 1348131 | 4 | 692425..692844 | 1444..1025 | 2100 | 100 | Minus |
| 4 | 1348131 | 4 | 691991..692360 | 1813..1444 | 1850 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:03:03 has no hits.
BS10183.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:11:04 Download gff for
BS10183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myoglianin-RC | 1..1797 | 17..1813 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:41:16 Download gff for
BS10183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myoglianin-RC | 863..2660 | 16..1813 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:27 Download gff for
BS10183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 387..2183 | 17..1813 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:48:36 Download gff for
BS10183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myoglianin-RC | 864..2660 | 17..1813 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:09:11 Download gff for
BS10183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 387..2183 | 17..1813 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:09:11 Download gff for
BS10183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 691991..692359 | 1445..1813 | 100 | <- | Minus |
| 4 | 692425..692843 | 1026..1444 | 100 | <- | Minus |
| 4 | 693381..694389 | 17..1025 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:27 Download gff for
BS10183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 712617..712985 | 1445..1813 | 100 | <- | Minus |
| arm_4 | 713051..713469 | 1026..1444 | 100 | <- | Minus |
| arm_4 | 714007..715015 | 17..1025 | 100 | | Minus |
BS10183.pep Sequence
Translation from 16 to 1812
> BS10183.pep
MLANSCCGWRKYKTHDQHHRTLKKKTRQNTSDTTVHIEVNSNEIQFPGSY
RFNLDSKKINIGRMNILGHKRGNFRVTRYVTVTVLLILSTAVNAYAQPEN
KSFSNSSNNDSPEMVMLSNETNNSAKVLSEKNGSSSISADDKINENMGIF
QMKVQSKPGKKSTPLAKVSEHGDLSRVQSVSLYRNTLINIESMLQRQLRE
KAKVDSIESIKMHILMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKT
TVWNRMESIDESHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLI
DLNKNQAKKSDIPINTNDEEYESILSHISSIYIFPEEIQPHVRHNRKVDV
FRFQIDSSYSDLSYATLHLYLRGWDWISAHQPGLLEEIKKQPRKDIVVTI
HRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSLLGNLGSNMTQ
EILIKGAETWMKSLVVTTDNTSKNPLTVHIEIGSQKKHRRKRSVYMDCTE
NDHDMRCCRYPLKVNFTSFGWHFVVAPTSFDAYFCSGDCKVGYLEQYPHT
HLAALTTSATPCCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSCS*
BS10183.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:25:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| myo-PD | 598 | CG1838-PD | 1..598 | 1..598 | 3137 | 100 | Plus |
| myo-PC | 598 | CG1838-PC | 1..598 | 1..598 | 3137 | 100 | Plus |
| myo-PA | 598 | CG1838-PA | 1..598 | 1..598 | 3137 | 100 | Plus |
| dpp-PA | 588 | CG9885-PA | 463..587 | 483..597 | 192 | 32.8 | Plus |
| dpp-PE | 588 | CG9885-PE | 463..587 | 483..597 | 192 | 32.8 | Plus |
