Clone BS10191 Report

Search the DGRC for BS10191

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:101
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG17930-RA
Protein status:BS10191.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS10191.3prime Sequence

904 bp (849 high quality bases) assembled on 2006-04-19

> BS10191.3prime
ATGGTCTAGAAAGCTTCTAGTAGGCCATGACATCGTGGACCCGGCGGAAT
CGTTCGCCTGCCTGTCTTAGCGTCAATCCTCGGGTTTCTGGCATTAGAAC
GGCAAAAGCTACGAGGCCTATTACCATAATAATTCCGACAGCGACAAAGT
ACGTGTAATAGAACTCTGCGGTGGGAACAAACTTGACGATCACAATGATA
TGTATCACCTGCTCCAAACACACGATCAGGCCAATCAAGAAGGGTTTCAC
TCTCATCGGAAAAGCCTCGCCCAGATAAGCGGATGAGCTGCAGATGAAGA
AACCGGCGAAGAACTGGAATGCCATGCCCAGACGGCACACTTGCCACATA
AAGTAATCGTCGAAGATGTGCCCGTAGTCCCCGTAGACTCCGGCCATGCC
CAGCATTAATCCAGCCATGCACATGAGTCCAAGTAGTGAGACAAATTTCC
GGCCCACGGTGTCCAGAACGGCGAAGGTGATCAGGGCACCGATCAGACGA
AGAAGTCCAAATATAATCGTGGGCCAGGAGTGCAGGGTGCCCTCCACCAG
CTCCGTGGTTGTCAGTATTGAATATGACAGTGGCACCGAGAAGGTGAAAG
CAACGAAGCAGCGGAAGAGCAGCAGCTTGAGAAAGGGCATCATAGACTCT
CCCAGCTGCTCGCCTACTCCTTGGGCGCTGCCTTCCACCACGTATAGCTT
TGCCTCGTCGTAGGCTCGATCTCCAGCCTCTCGAGTCCAATAGGATCCCA
TTAGCTGCTTCACACTGGCACGTGCCTTCTGCTCCTGGTTCTGGCGGATA
TAGAAGATCGGCGAGTCGATCGTGATGGCTACACTTCCCAGCGCAATGGC
CGTNAAAACGATTCCAAAAATTCCGTGTACTCGATTGATGGTCATGCCCC
ATCC

BS10191.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:43:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG17930-PA 1509 CG17930-RA 627..1509 899..17 4396 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:18:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG17930-RA 1653 CG17930-RA 716..1603 904..17 4414 99.8 Minus
CG17929-RB 1670 CG17929-RB 1261..1334 310..237 205 85.1 Minus
CG6901-RA 1581 CG6901-RA 1193..1263 324..254 190 84.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:18:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16328685..16329572 904..17 4414 99.8 Minus
3R 32079331 3R 16326922..16326995 310..237 205 85.1 Minus
3R 32079331 3R 16324740..16324810 324..254 190 84.5 Minus
Blast to na_te.dros performed 2015-02-12 13:18:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 7048..7115 597..662 137 69.1 Plus

BS10191.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:32:19 Download gff for BS10191.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17930-PA 622..1509 17..904 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:50:36 Download gff for BS10191.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17930-PA 622..1509 17..904 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 10:25:39 Download gff for BS10191.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17930-RA 716..1613 7..904 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:51:21 Download gff for BS10191.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17930-RA 716..1613 7..904 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 16:51:21 Download gff for BS10191.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 16328685..16329582 7..904 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 10:25:39 Download gff for BS10191.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12154407..12155304 7..904 99   Minus

BS10191.5prime Sequence

857 bp (830 high quality bases) assembled on 2006-04-19

> BS10191.5prime
GAAGTTATCAGTCGACATGACGACCACATATGTCACTGCGGGTCCAGTGC
CCGTCCAGCAAACCACATACATCACCACTGGACCCCAGCAGACCACGTAT
ATCACCAATGGACGCCAACAACAACCACCACCGCCCCCACCACCAACCAC
GGTGATCATCACCACCCAATCGAACAGCCGATGGGCAACCCCTACTCAAA
CGCAATCTGGAACAGCAGCTACCCTTCTCTTTGTGTATGCTGGTATGGAC
ATGGCCCAAGGTCTTGGTTGGAACTTGACTGCCGTTTCCGCCAACACCCT
GGAGTTCCAGTACAGTTGGTTTATTGGCGTTATTATCGGAGCTGTGGTGT
CCGCCATTACATCAGCATTTCTGCCCAAAATAGTATTTTATGGTCTGGGT
GGTGTGATGAACCTAATTGACGCCATTATCTTTGTGAGTGCTCCATATGA
GTACGAGTCGATCCTGGCCGCCCGATATGTGGGAGGAGTGGGCATTGGGT
TAATCACTGTGCCATTCCTAATCCACAGCGCAGAGATCGCTTCGAGTACC
AACAGAGGAACCTGCTGTGCATTGGAGCAATATGGTCTGGCATTGGGAGT
GGCCATTCAAGTAATCTACGACTCACAGTGGTCTCAGGGATTGGGCATGA
CCATCAATCGAGTACACGGAATTTTTGGAATCGTTTTTACGGCCATTGCG
CTGGGAAGTGTAGCCATCACGATCGACTCGCCGATCTTCTATATCCGCCA
GAACCAGGAGCAGAAGGCACGTGCCAGTGTGAAGCAGCTAATGGGATCCT
ATTGGACTCGAGAGGCTGGAGATCGAGCCTACGACGAGGCAAAGCTATAC
GTGGTGG

BS10191.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:43:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG17930-PA 1509 CG17930-RA 1..841 17..857 4205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:38:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG17930-RA 1653 CG17930-RA 95..935 17..857 4205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:38:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16328439..16328904 392..857 2330 100 Plus
3R 32079331 3R 16327943..16328144 17..218 1010 100 Plus
3R 32079331 3R 16328202..16328378 216..392 885 100 Plus
Blast to na_te.dros performed on 2015-02-11 14:38:44 has no hits.

BS10191.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:32:20 Download gff for BS10191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17930-PA 1..841 17..857 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:50:38 Download gff for BS10191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17930-PA 1..841 17..857 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:44:02 Download gff for BS10191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17930-RA 87..935 10..857 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:03:50 Download gff for BS10191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17930-RA 87..935 10..857 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:03:50 Download gff for BS10191.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 16327935..16328144 10..218 98 -> Plus
3R 16328205..16328377 219..391 100 -> Plus
3R 16328439..16328904 392..857 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:44:02 Download gff for BS10191.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12153657..12153866 10..218 98 -> Plus
arm_3R 12153927..12154099 219..391 100 -> Plus
arm_3R 12154161..12154626 392..857 100   Plus

BS10191.complete Sequence

1541 bp (1541 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ636588

> BS10191.complete
GAAGTTATCAGTCGACATGACGACCACATATGTCACTGCGGGTCCAGTGC
CCGTCCAGCAAACCACATACATCACCACTGGACCCCAGCAGACCACGTAT
ATCACCAATGGACGCCAACAACAACCACCACCGCCCCCACCACCAACCAC
GGTGATCATCACCACCCAATCGAACAGCCGATGGGCAACCCCTACTCAAA
CGCAATCTGGAACAGCAGCTACCCTTCTCTTTGTGTATGCTGGTATGGAC
ATGGCCCAAGGTCTTGGTTGGAACTTGACTGCCGTTTCCGCCAACACCCT
GGAGTTCCAGTACAGTTGGTTTATTGGCGTTATTATCGGAGCTGTGGTGT
CCGCCATTACATCAGCATTTCTGCCCAAAATAGTATTTTATGGTCTGGGT
GGTGTGATGAACCTAATTGACGCCATTATCTTTGTGAGTGCTCCATATGA
GTACGAGTCGATCCTGGCCGCCCGATATGTGGGAGGAGTGGGCATTGGGT
TAATCACTGTGCCATTCCTAATCCACAGCGCAGAGATCGCTTCGAGTACC
AACAGAGGAACCTGCTGTGCATTGGAGCAATATGGTCTGGCATTGGGAGT
GGCCATTCAAGTAATCTACGACTCACAGTGGTCTCAGGGATTGGGCATGA
CCATCAATCGAGTACACGGAATTTTTGGAATCGTTTTTACGGCCATTGCG
CTGGGAAGTGTAGCCATCACGATCGACTCGCCGATCTTCTATATCCGCCA
GAACCAGGAGCAGAAGGCACGTGCCAGTGTGAAGCAGCTAATGGGATCCT
ATTGGACTCGAGAGGCTGGAGATCGAGCCTACGACGAGGCAAAGCTATAC
GTGGTGGAAGGCAGCGCCCAAGGAGTAGGCGAGCAGCTGGGAGAGTCTAT
GATGCCCTTTCTCAAGCTGCTGCTCTTCCGCTGCTTCGTTGCTTTCACCT
TCTCGGTGCCACTGTCATATTCAATACTGACAACCACGGAGCTGGTGGAG
GGCACCCTGCACTCCTGGCCCACGATTATATTTGGACTTCTTCGTCTGAT
CGGTGCCCTGATCACCTTCGCCGTTCTGGACACCGTGGGCCGGAAATTTG
TCTCACTACTTGGACTCATGTGCATGGCTGGATTAATGCTGGGCATGGCC
GGAGTCTACGGGGACTACGGGCACATCTTCGACGATTACTTTATGTGGCA
AGTGTGCCGTCTGGGCATGGCATTCCAGTTCTTCGCCGGTTTCTTCATCT
GCAGCTCATCCGCTTATCTGGGCGAGGCTTTTCCGATGAGAGTGAAACCC
TTCTTGATTGGCCTGATCGTGTGTTTGGAGCAGGTGATACATATCATTGT
GATCGTCAAGTTTGTTCCCACCGCAGAGTTCTATTACACGTACTTTGTCG
CTGTCGGAATTATTATGGTAATAGGCCTCGTAGCTTTTGCCGTTCTAATG
CCAGAAACCCGAGGATTGACGCTAAGACAGGCAGGCGAACGATTCCGCCG
GGTCCACGATGTCATGGCCTACTAGAAGCTTTCTAGACCAT

BS10191.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:24:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG17930-RA 1509 CG17930-PA 1..1509 17..1525 7545 100 Plus
CG17929-RB 1476 CG17929-PB 1180..1253 1232..1305 205 85.1 Plus
CG6901-RA 1458 CG6901-PA 1145..1215 1218..1288 190 84.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG17930-RA 1653 CG17930-RA 95..1603 17..1525 7545 100 Plus
CG17929-RB 1670 CG17929-RB 1261..1334 1232..1305 205 85.1 Plus
CG6901-RA 1581 CG6901-RA 1193..1263 1218..1288 190 84.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16328439..16329572 392..1525 5670 100 Plus
3R 32079331 3R 16327943..16328144 17..218 1010 100 Plus
3R 32079331 3R 16328202..16328378 216..392 885 100 Plus
3R 32079331 3R 16326922..16326995 1232..1305 205 85.1 Plus
3R 32079331 3R 16324740..16324810 1218..1288 190 84.5 Plus
Blast to na_te.dros performed 2014-11-27 16:24:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 7048..7115 945..880 137 69.1 Minus

BS10191.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:37:40 Download gff for BS10191.complete
Subject Subject Range Query Range Percent Splice Strand
CG17930-RA 1..1509 17..1525 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:23:11 Download gff for BS10191.complete
Subject Subject Range Query Range Percent Splice Strand
CG17930-RA 86..1612 10..1535 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:20 Download gff for BS10191.complete
Subject Subject Range Query Range Percent Splice Strand
CG17930-RA 95..1603 17..1525 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:37:40 Download gff for BS10191.complete
Subject Subject Range Query Range Percent Splice Strand
CG17930-RA 86..1612 10..1535 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:17:45 Download gff for BS10191.complete
Subject Subject Range Query Range Percent Splice Strand
CG17930-RA 95..1603 17..1525 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:17:45 Download gff for BS10191.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16327943..16328144 17..218 100 -> Plus
3R 16328205..16328377 219..391 100 -> Plus
3R 16328439..16329572 392..1525 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:20 Download gff for BS10191.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12153665..12153866 17..218 100 -> Plus
arm_3R 12153927..12154099 219..391 100 -> Plus
arm_3R 12154161..12155294 392..1525 100   Plus

BS10191.pep Sequence

Translation from 16 to 1524

> BS10191.pep
MTTTYVTAGPVPVQQTTYITTGPQQTTYITNGRQQQPPPPPPPTTVIITT
QSNSRWATPTQTQSGTAATLLFVYAGMDMAQGLGWNLTAVSANTLEFQYS
WFIGVIIGAVVSAITSAFLPKIVFYGLGGVMNLIDAIIFVSAPYEYESIL
AARYVGGVGIGLITVPFLIHSAEIASSTNRGTCCALEQYGLALGVAIQVI
YDSQWSQGLGMTINRVHGIFGIVFTAIALGSVAITIDSPIFYIRQNQEQK
ARASVKQLMGSYWTREAGDRAYDEAKLYVVEGSAQGVGEQLGESMMPFLK
LLLFRCFVAFTFSVPLSYSILTTTELVEGTLHSWPTIIFGLLRLIGALIT
FAVLDTVGRKFVSLLGLMCMAGLMLGMAGVYGDYGHIFDDYFMWQVCRLG
MAFQFFAGFFICSSSAYLGEAFPMRVKPFLIGLIVCLEQVIHIIVIVKFV
PTAEFYYTYFVAVGIIMVIGLVAFAVLMPETRGLTLRQAGERFRRVHDVM
AY*

BS10191.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:14:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG17930-PA 502 CG17930-PA 1..502 1..502 2583 100 Plus
CG17929-PB 491 CG17929-PB 1..491 1..502 1165 47.2 Plus
CG6901-PA 485 CG6901-PA 1..485 1..502 1163 46.6 Plus
CG42826-PA 473 CG42826-PA 8..467 41..495 496 26.8 Plus
CG42825-PA 518 CG6640-PB 22..512 10..495 461 29.2 Plus