Clone Sequence Records
BS10203.3prime Sequence
946 bp (737 high quality bases) assembled on 2006-04-19
> BS10203.3prime
ATGGTCTAGAAAGCTTTTACGAATATATTGTGCGCTCTATCCACTCCTCC
AACGTAAAGGTGGCTGTTTCGTTCTTCTCGGTGTCGCGCTCCTTGAATAT
ATCAATATATGTCTTGATTTTAACAGCGCACATGATAAAATCATCGAAGG
CTATTTTGCCATCACGAGAACCATATCGATGGCCCAAAACATTTAGAACA
CGATTGTTTAGATGATAGCCAGCAGAGTTAAGAGCTTCGCGAAGCTGGAA
TCCGGATACCCTGCCCGTATTCTCAACATCATAGACCTTAAATATGGCCT
TCCATTTGGCAATTTCCGAGAGCAAAGTCTCGAACTCCTCGAATCCCAGC
TTTCCAGACTTATCAGCATCCAACATGGCAACCATGGAGCGGCAAACATC
CTTGGAAAAGCCATGAGTCTCATCCACAATTGCATTTGCTGTTACAGGAC
CTCCATCCGCCGGATTGTCCCCTATCAGCCTCTTGTTCGACTGATCATTC
ATTCCCAACTGCTCCTCGAATGGCGTACCCTTCAAAAACGGTCCACAAAT
CAAGGATAAAAGTCCACAAGCGCCAGCTCCATCGTCACCAGGGCCAGCAG
CCTGGGTCTCAAAGGCCATGTTATTGGAGAAACGGTTGAAAACCACTGGT
TTGGGTAAATCGTCCCTCATCGAATGGTCCAAAATGCGTTTCAATTCCAT
CCAATCCACCTCCATGTCCTTGCCGGCAATGCTGTCGAAGAGGCGTCGCA
AGCCCTCCTTCTGAGGATCGATGGGCTTGGGTGTTGGGAATCCTGGCGTA
ATCGTATCGGCTTTGCCGCCATAACCCACATGATCATCATTCTCTTCCAT
GTTATTTTGAGTTTCTGAGAACACTCGAATGATGAACTCTCCCTCCTCGT
TTGGATCGAAAAGTGAAGGCACAATCAGGTAGTGACCAGGAGGCAT
BS10203.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7563-PB | 2487 | CalpA-RB | 1559..2487 | 945..17 | 4595 | 99.7 | Minus |
| CG7563-PA | 1698 | CalpA-RA | 1559..1658 | 945..846 | 450 | 98 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 16:20:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpA-RC | 2889 | CG7563-RC | 1696..2625 | 945..16 | 4620 | 99.8 | Minus |
| CalpA-RD | 2934 | CG7563-RD | 1741..2670 | 945..16 | 4620 | 99.8 | Minus |
| CalpA-RB | 2797 | CG7563-RB | 1604..2533 | 945..16 | 4620 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 16:20:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19429822..19430152 | 433..103 | 1655 | 100 | Minus |
| 2R | 25286936 | 2R | 19429537..19429765 | 661..433 | 1145 | 100 | Minus |
| 2R | 25286936 | 2R | 19429337..19429479 | 803..661 | 715 | 100 | Minus |
| 2R | 25286936 | 2R | 19428445..19428544 | 945..846 | 470 | 98 | Minus |
| 2R | 25286936 | 2R | 19430213..19430300 | 103..16 | 440 | 100 | Minus |
| 2R | 25286936 | 2R | 19429237..19429279 | 845..803 | 215 | 100 | Minus |
| 3L | 28110227 | 3L | 9891639..9891767 | 945..817 | 195 | 76.7 | Minus |
Blast to na_te.dros performed on 2015-02-03 16:20:53 has no hits.
BS10203.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:32:34 Download gff for
BS10203.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-PB | 1557..2487 | 17..946 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:50:57 Download gff for
BS10203.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7563-PB | 1557..2487 | 17..946 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:25:52 Download gff for
BS10203.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RB | 1602..2533 | 16..946 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 18:53:12 Download gff for
BS10203.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RB | 1602..2533 | 16..946 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 18:53:12 Download gff for
BS10203.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19428443..19428544 | 846..946 | 97 | -> | Minus |
| 2R | 19429237..19429279 | 803..845 | 100 | -> | Minus |
| 2R | 19429338..19429479 | 661..802 | 100 | -> | Minus |
| 2R | 19429538..19429765 | 433..660 | 100 | -> | Minus |
| 2R | 19429823..19430152 | 103..432 | 100 | -> | Minus |
| 2R | 19430214..19430300 | 16..102 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:25:52 Download gff for
BS10203.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15315948..15316049 | 846..946 | 97 | -> | Minus |
| arm_2R | 15316742..15316784 | 803..845 | 100 | -> | Minus |
| arm_2R | 15316843..15316984 | 661..802 | 100 | -> | Minus |
| arm_2R | 15317043..15317270 | 433..660 | 100 | -> | Minus |
| arm_2R | 15317328..15317657 | 103..432 | 100 | -> | Minus |
| arm_2R | 15317719..15317805 | 16..102 | 100 | | Minus |
BS10203.5prime Sequence
905 bp (825 high quality bases) assembled on 2006-04-19
> BS10203.5prime
GAAGTTATCAGTCGACATGGACGACTTGAGGGGATTCTTGAGGCAAGCGG
GACAGGAGTTCCTCAATGCAGCTGGTGAGGCTGCAATGGGAGCGGCCAAG
GATGTGGTCGGATCGGTGATCAACGAGATCTTCATCAAGAAGGAGGCCGA
CACCAAGAGGGTTCTGCCCAGCATCAAGAATATGAGAGTTCTGGGAGAGA
AGAGCTCGAGCCTGGGACCCTATTCCGAGGTGCAGGACTATGAGACAATA
TTGAACAGCTGCCTGGCCAGTGGTTCCCTTTTCGAAGATCCACTTTTTCC
GGCTTCGAACGAGTCTCTTCAGTTTTCCCGGCGTCCAGATCGTCACATCG
AATGGCTGAGACCTCATGAAATTGCCGAGAATCCCCAGTTTTTTGTGGAG
GGTTATTCGCGTTTTGATGTTCAGCAAGGCGAGCTTGGTGACTGTTGGCT
CTTGGCTGCCACAGCCAATTTAACTCAGGAATCCAACCTTTTCTTTCGGG
TAATTCCAGCGGAACAGAGTTTCGAGGAGAACTATGCTGGTATCTTCCAT
TTCCGCTTTTGGCAGTATGGTAAATGGGTTGATGTAATCATTGATGACCG
TTTGCCCACTTATAATGGAGAGCTGATGTACATGCACTCCACGGAGAAGA
ACGAGTTCTGGAGCGCCCTGCTGGAGAAGGCTTATGCCAAACTTCATGGA
TCCTACGAGGCACTAAAGGGAGGCAGCACTTGCGAGGCCATGGAGGACTT
TACTGGCGGCGTATCCGAGTGGTACGATTTAAAAGAAGCACCCGGCAATC
TATTCACCATTCTGCAAAAAGCAGCTGAACGCAATTCCATGATGGGATGC
TCGATTGAGCCTGATCAAATGTCACGGAGGCAGAAACTCCTCAGGGCTTA
ATCCG
BS10203.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7563-PB | 2487 | CalpA-RB | 1..850 | 17..866 | 4250 | 100 | Plus |
| CG7563-PA | 1698 | CalpA-RA | 1..850 | 17..866 | 4250 | 100 | Plus |
| CG8107-PA | 2778 | CalpB-RA | 1085..1274 | 588..777 | 450 | 89.4 | Plus |
| CG7563-PB | 2487 | CalpA-RB | 851..890 | 866..905 | 200 | 100 | Plus |
| CG7563-PA | 1698 | CalpA-RA | 851..890 | 866..905 | 200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:41:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpA-RC | 2889 | CG7563-RC | 138..1027 | 17..905 | 4425 | 99.9 | Plus |
| CalpA-RA | 2301 | CG7563-RA | 138..1027 | 17..905 | 4425 | 99.9 | Plus |
| CalpA-RB | 2797 | CG7563-RB | 46..935 | 17..905 | 4425 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:41:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19427378..19427593 | 691..905 | 1030 | 99.5 | Plus |
| 2R | 25286936 | 2R | 19426630..19426807 | 191..368 | 890 | 100 | Plus |
| 2R | 25286936 | 2R | 19426045..19426218 | 17..190 | 870 | 100 | Plus |
| 2R | 25286936 | 2R | 19427013..19427144 | 444..575 | 660 | 100 | Plus |
| 3L | 28110227 | 3L | 9890292..9890566 | 446..720 | 640 | 82.2 | Plus |
| 2R | 25286936 | 2R | 19427200..19427321 | 569..690 | 610 | 100 | Plus |
| 2R | 25286936 | 2R | 19426868..19426944 | 368..444 | 385 | 100 | Plus |
| 3L | 28110227 | 3L | 9890786..9890874 | 722..810 | 235 | 84.3 | Plus |
Blast to na_te.dros performed on 2015-02-13 00:41:43 has no hits.
BS10203.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:32:35 Download gff for
BS10203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-PA | 1..890 | 17..905 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:50:58 Download gff for
BS10203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7563-PA | 1..890 | 17..905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:01:39 Download gff for
BS10203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RB | 36..935 | 6..905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:47:54 Download gff for
BS10203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RB | 36..935 | 6..905 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:47:54 Download gff for
BS10203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19427378..19427593 | 691..905 | 99 | | Plus |
| 2R | 19427201..19427321 | 570..690 | 100 | -> | Plus |
| 2R | 19426035..19426218 | 6..190 | 97 | -> | Plus |
| 2R | 19426630..19426806 | 191..367 | 100 | -> | Plus |
| 2R | 19426868..19426944 | 368..444 | 100 | -> | Plus |
| 2R | 19427014..19427138 | 445..569 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:01:39 Download gff for
BS10203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15314883..15315098 | 691..905 | 99 | | Plus |
| arm_2R | 15313540..15313723 | 6..190 | 97 | -> | Plus |
| arm_2R | 15314135..15314311 | 191..367 | 100 | -> | Plus |
| arm_2R | 15314373..15314449 | 368..444 | 100 | -> | Plus |
| arm_2R | 15314519..15314643 | 445..569 | 100 | -> | Plus |
| arm_2R | 15314706..15314826 | 570..690 | 100 | -> | Plus |
BS10203.complete Sequence
2519 bp assembled on 2007-11-30
GenBank Submission: FJ636592
> BS10203.complete
GAAGTTATCAGTCGACATGGACGACTTGAGGGGATTCTTGAGGCAAGCGG
GACAGGAGTTCCTCAATGCAGCTGGTGAGGCTGCAATGGGAGCGGCCAAG
GATGTGGTCGGATCGGTGATCAACGAGATCTTCATCAAGAAGGAGGCCGA
CACCAAGAGGGTTCTGCCCAGCATCAAGAATATGAGAGTTCTGGGAGAGA
AGAGCTCGAGCCTGGGACCCTATTCCGAGGTGCAGGACTATGAGACAATA
TTGAACAGCTGCCTGGCCAGTGGTTCCCTTTTCGAAGATCCACTTTTTCC
GGCTTCGAACGAGTCTCTTCAGTTTTCCCGGCGTCCAGATCGTCACATCG
AATGGCTGAGACCTCATGAAATTGCCGAGAATCCCCAGTTTTTTGTGGAG
GGTTATTCGCGTTTTGATGTTCAGCAAGGCGAGCTTGGTGACTGTTGGCT
CTTGGCTGCCACAGCCAATTTAACTCAGGAATCCAACCTTTTCTTTCGGG
TAATTCCAGCGGAACAGAGTTTCGAGGAGAACTATGCTGGTATCTTCCAT
TTCCGCTTTTGGCAGTATGGTAAATGGGTTGATGTAATCATTGATGACCG
TTTGCCCACTTATAATGGAGAGCTGATGTACATGCACTCCACGGAGAAGA
ACGAGTTCTGGAGCGCCCTGCTGGAGAAGGCTTATGCCAAACTTCATGGA
TCCTACGAGGCACTAAAGGGAGGCAGCACTTGCGAGGCCATGGAGGACTT
TACTGGCGGCGTATCCGAGTGGTACGATTTAAAAGAAGCACCCGGCAATC
TATTCACCATTCTGCAAAAAGCAGCTGAACGCAATTCCATGATGGGATGC
TCGATTGAGCCTGATCCAAATGTCACGGAGGCAGAAACTCCTCAGGGCTT
AATCCGTGGTCACGCTTACTCCATAACCAAGGTTTGCCTTATTGACATAG
TAACGCCAAATCGTCAGGGAAAGATCCCTATGATAAGAATGCGAAATCCT
TGGGGCAATGAAGCCGAGTGGAATGGACCATGGAGTGATAGCTCACCAGA
ATGGCGCTATATACCCGAGGAACAGAAGGCGGAGATTGGACTAACATTCG
ACAGAGACGGAGAGTTCTGGATGTCCTTCCAAGATTTTCTTAACCACTTC
GATCGCGTGGAGATTTGCAATTTGTCGCCGGACTCACTGACCGAGGACCA
ACAAAACAGTGGCAAGCGAAAGTGGGAGATGTCCATGTATGAGGGAGAAT
GGACACCCGGTGTTACAGCTGGTGGTTGCCGCAATTTCCTGGATACCTTC
TGGCACAACCCCCAGTATATTATCACCCTAGTCGATCCTGATGAGGAAGA
CGAAGAGGGACAGTGCACCGTCATCGTGGCCTTAATGCAAAAGAATCGCA
GATCGAAGCGCAATATGGGAATGGAGTGTCTGACCATTGGTTTCGCTATC
TATAGCCTTAATGATCGCGAACTGGAAAACCGTCCCCAGGGTCTGAACTT
TTTCAGATACAAGTCTTCTGTGGGAAGATCGCCGCACTTTATCAACACCC
GCGAAGTGTGTGCTCGCTTCAAATTGCCTCCTGGTCACTACCTGATTGTG
CCTTCAACTTTCGATCCAAACGAGGAGGGAGAGTTCATCATTCGAGTGTT
CTCAGAAACTCAAAATAACATGGAAGAGAATGATGATCATGTGGGTTATG
GCGGCAAAGCCGATACGATTACGCCAGGATTCCCAACACCCAAGCCCATC
GATCCTCAGAAGGAGGGCTTGCGACGCCTCTTCGACAGCATTGCCGGCAA
GGACATGGAGGTGGATTGGATGGAATTGAAACGCATTTTGGACCATTCGA
TGAGGGACGATTTACCCAAACCAGTGGTTTTCAACCGTTTCTCCAATAAC
ATGGCCTTTGAGACCCAGGCTGCTGGCCCTGGTGACGATGGAGCTGGCGC
TTGTGGACTTTTATCCTTGATTTGTGGACCGTTTTTGAAGGGTACGCCAT
TCGAGGAGCAGTTGGGAATGAATGATCAGTCGAACAAGAGGCTGATAGGG
GACAATCCGGCGGATGGAGGTCCTGTAACAGCAAATGCAATTGTGGATGA
GACTCATGGCTTTTCCAAGGATGTTTGCCGCTCCATGGTTGCCATGTTGG
ATGCTGATAAGTCTGGAAAGCTGGGATTCGAGGAGTTCGAGACTTTGCTC
TCGGAAATTGCCAAATGGAAGGCCATATTTAAGGTCTATGATGTTGAGAA
TACGGGCAGGGTATCCGGATTCCAGCTTCGCGAAGCTCTTAACTCTGCTG
GCTATCATCTAAACAATCGTGTTCTAAATGTTTTGGGCCATCGATATGGT
TCTCGTGATGGCAAAATAGCCTTCGATGATTTTATCATGTGCGCTGTTAA
AATCAAGACATATATTGATATATTCAAGGAGCGCGACACCGAGAAGAACG
AAACAGCCACCTTTACGTTGGAGGAGTGGATAGAGCGCACAATATATTCG
TAAAAGCTTTCTAGACCAT
BS10203.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:45:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpA-RC | 2487 | CG7563-PC | 1..2487 | 17..2503 | 12435 | 100 | Plus |
| CalpA-RB | 2487 | CG7563-PB | 1..2487 | 17..2503 | 12435 | 100 | Plus |
| CalpA-RD | 2532 | CG7563-PD | 220..2532 | 191..2503 | 11565 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:45:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpA-RC | 2889 | CG7563-RC | 138..2625 | 17..2504 | 12440 | 100 | Plus |
| CalpA-RB | 2797 | CG7563-RB | 46..2533 | 17..2504 | 12440 | 100 | Plus |
| CalpA-RD | 2934 | CG7563-RD | 357..2670 | 191..2504 | 11570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:45:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19427968..19428364 | 1161..1557 | 1985 | 100 | Plus |
| 2R | 25286936 | 2R | 19429822..19430152 | 2087..2417 | 1655 | 100 | Plus |
| 2R | 25286936 | 2R | 19427378..19427623 | 691..936 | 1230 | 100 | Plus |
| 3L | 28110227 | 3L | 9890786..9891767 | 722..1703 | 1220 | 74.9 | Plus |
| 2R | 25286936 | 2R | 19427675..19427907 | 930..1162 | 1165 | 100 | Plus |
| 2R | 25286936 | 2R | 19429537..19429765 | 1859..2087 | 1145 | 100 | Plus |
| 2R | 25286936 | 2R | 19426630..19426807 | 191..368 | 890 | 100 | Plus |
| 2R | 25286936 | 2R | 19426045..19426218 | 17..190 | 870 | 100 | Plus |
| 2R | 25286936 | 2R | 19429337..19429479 | 1717..1859 | 715 | 100 | Plus |
| 2R | 25286936 | 2R | 19427013..19427144 | 444..575 | 660 | 100 | Plus |
| 3L | 28110227 | 3L | 9890292..9890566 | 446..720 | 640 | 82.2 | Plus |
| 2R | 25286936 | 2R | 19427200..19427321 | 569..690 | 610 | 100 | Plus |
| 2R | 25286936 | 2R | 19428426..19428544 | 1556..1674 | 595 | 100 | Plus |
| 2R | 25286936 | 2R | 19430213..19430300 | 2417..2504 | 440 | 100 | Plus |
| 2R | 25286936 | 2R | 19426868..19426944 | 368..444 | 385 | 100 | Plus |
| 2R | 25286936 | 2R | 19429237..19429279 | 1675..1717 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:45:03 has no hits.
BS10203.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:11:10 Download gff for
BS10203.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RC | 1..2487 | 17..2503 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:41:25 Download gff for
BS10203.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RC | 168..2665 | 6..2504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:30:52 Download gff for
BS10203.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RB | 46..2530 | 17..2501 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:50:09 Download gff for
BS10203.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RC | 178..2662 | 17..2501 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:37:16 Download gff for
BS10203.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RB | 46..2530 | 17..2501 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:37:16 Download gff for
BS10203.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19426630..19426806 | 191..367 | 100 | -> | Plus |
| 2R | 19426868..19426944 | 368..444 | 100 | -> | Plus |
| 2R | 19429538..19429765 | 1860..2087 | 100 | -> | Plus |
| 2R | 19427014..19427138 | 445..569 | 100 | -> | Plus |
| 2R | 19427201..19427321 | 570..690 | 100 | -> | Plus |
| 2R | 19427378..19427618 | 691..931 | 100 | -> | Plus |
| 2R | 19427677..19427907 | 932..1162 | 100 | -> | Plus |
| 2R | 19427970..19428362 | 1163..1555 | 100 | -> | Plus |
| 2R | 19426045..19426218 | 17..190 | 100 | -> | Plus |
| 2R | 19428426..19428544 | 1556..1674 | 100 | -> | Plus |
| 2R | 19429237..19429279 | 1675..1717 | 100 | -> | Plus |
| 2R | 19429338..19429479 | 1718..1859 | 100 | -> | Plus |
| 2R | 19429823..19430152 | 2088..2417 | 100 | -> | Plus |
| 2R | 19430214..19430297 | 2418..2501 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:30:52 Download gff for
BS10203.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15314519..15314643 | 445..569 | 100 | -> | Plus |
| arm_2R | 15314706..15314826 | 570..690 | 100 | -> | Plus |
| arm_2R | 15315182..15315412 | 932..1162 | 100 | -> | Plus |
| arm_2R | 15313550..15313723 | 17..190 | 100 | -> | Plus |
| arm_2R | 15314135..15314311 | 191..367 | 100 | -> | Plus |
| arm_2R | 15314373..15314449 | 368..444 | 100 | -> | Plus |
| arm_2R | 15314883..15315123 | 691..931 | 100 | -> | Plus |
| arm_2R | 15315475..15315867 | 1163..1555 | 100 | -> | Plus |
| arm_2R | 15315931..15316049 | 1556..1674 | 100 | -> | Plus |
| arm_2R | 15316742..15316784 | 1675..1717 | 100 | -> | Plus |
| arm_2R | 15316843..15316984 | 1718..1859 | 100 | -> | Plus |
| arm_2R | 15317043..15317270 | 1860..2087 | 100 | -> | Plus |
| arm_2R | 15317328..15317657 | 2088..2417 | 100 | -> | Plus |
| arm_2R | 15317719..15317802 | 2418..2501 | 100 | | Plus |
BS10203.pep Sequence
Translation from 16 to 2502
> BS10203.pep
MDDLRGFLRQAGQEFLNAAGEAAMGAAKDVVGSVINEIFIKKEADTKRVL
PSIKNMRVLGEKSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNES
LQFSRRPDRHIEWLRPHEIAENPQFFVEGYSRFDVQQGELGDCWLLAATA
NLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQYGKWVDVIIDDRLPTYN
GELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVS
EWYDLKEAPGNLFTILQKAAERNSMMGCSIEPDPNVTEAETPQGLIRGHA
YSITKVCLIDIVTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIP
EEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQNSGK
RKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQYIITLVDPDEEDEEGQC
TVIVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELENRPQGLNFFRYKS
SVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQN
NMEENDDHVGYGGKADTITPGFPTPKPIDPQKEGLRRLFDSIAGKDMEVD
WMELKRILDHSMRDDLPKPVVFNRFSNNMAFETQAAGPGDDGAGACGLLS
LICGPFLKGTPFEEQLGMNDQSNKRLIGDNPADGGPVTANAIVDETHGFS
KDVCRSMVAMLDADKSGKLGFEEFETLLSEIAKWKAIFKVYDVENTGRVS
GFQLREALNSAGYHLNNRVLNVLGHRYGSRDGKIAFDDFIMCAVKIKTYI
DIFKERDTEKNETATFTLEEWIERTIYS*
BS10203.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:24:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpA-PC | 828 | CG7563-PC | 1..828 | 1..828 | 4437 | 100 | Plus |
| CalpA-PB | 828 | CG7563-PB | 1..828 | 1..828 | 4437 | 100 | Plus |
| CalpA-PD | 843 | CG7563-PD | 1..843 | 1..828 | 4411 | 98.2 | Plus |
| CalpA-PA | 565 | CG7563-PA | 1..565 | 1..561 | 2982 | 98.4 | Plus |
| CalpB-PB | 925 | CG8107-PB | 220..788 | 50..614 | 2506 | 78.9 | Plus |
