Clone BS10206 Report

Search the DGRC for BS10206

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:102
Well:6
Vector:pDNR-Dual
Associated Gene/TranscriptAcn-RA
Protein status:BS10206.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS10206.3prime Sequence

946 bp (867 high quality bases) assembled on 2006-04-19

> BS10206.3prime
ATGGTCTAGAAAGCTTCTAGTAACGTCTTCGCTCCCGCTCGCGACTGCGA
GATCGTCGCCGTTCGTTGGAACGATTGCGACGCGTCTCGCGCTGGCGGTC
ACGATCCTTCTCCCGCTCTTTCTGGCGCTCCTCCCGTTCCTTAATACGCA
GCTTGTGCTCCTCAATGCGTTTCTGACGGAATGCCTCCTTTTCTGCGATC
GCTTCCGGCGTAAGTGGCAGCCAGTATATGCAAGGTGTTCCCTTGGTTTT
TCGAAATAGATCATCTAGTAGTCTGATAGGCGGTTCATTCTCCTTCTTAG
TTTTGGACGCTGGCGATCCACTGCGGCTCCTTGCATGTGCATTGCGATCA
AGTCGCTCCCGCTCCCGATCGCGTCCTCGCCCCTCTCTGTCCCTAGAACG
CTTTCGTTCCTGTCCGGCTCGCTCCGCATCCCTAGACCTCGAGTCCAGTC
GATCCTTGCTGTCCCGACGCCTGTCGTTGCTGTGTTTGTCGTGGTCGCTT
GGTTCCTTTTTGCCAACATCCCATTCGCGTACAGGTCGCGCAGGTTTTTT
GTCAGACGGTTCCAACCGGGACCAAGCGTTGCCCGACTGCTGGTTATCTC
TGGTGTTTTCCTGCCCGTACCTCGGAGCCTCGTCCTTCGTTGAAAGTATT
GCCCGATCCATATCAGTGCGACTGCCAAAATCTACATTCAAACATTTGGG
ATTTGACACTGGCCAGCGAACTCCGTGCAGGGCATGTCGGGTTTCGATGG
CCTCGTCTTCAGTGGAATAGGCAACATAGCACTTAGACTTGATCCGATCT
ATCCAGAAACCATCTTCCTCAACGATCTTTCCCGTCCGCGCCAGCAGGCC
TTTCAGCTGCAGCACTGTGAAGGGGCGTACCAAATTGGTGATATAGAGCA
CGTGGCTGGCGCGGTTTCGAGCAGGACTAGGGTCACGGACTATGTG

BS10206.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG10473-PB 2220 CG10473-RB 1291..2220 946..17 4650 100 Minus
CG10473-PA 2220 CG10473-RA 1291..2220 946..17 4650 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
Acn-RC 3153 CG10473-RC 1503..2432 946..17 4650 100 Minus
Acn-RB 2513 CG10473-RB 1503..2432 946..17 4650 100 Minus
Acn-RA 2884 CG10473-RA 1418..2347 946..17 4650 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:18:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19047420..19047654 544..310 1175 100 Minus
2L 23513712 2L 19047152..19047362 755..545 1055 100 Minus
2L 23513712 2L 19046857..19047047 946..756 955 100 Minus
2L 23513712 2L 19047913..19048096 200..17 920 100 Minus
2L 23513712 2L 19047714..19047825 311..200 560 100 Minus
Blast to na_te.dros performed on 2015-02-12 13:18:48 has no hits.

BS10206.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:32:42 Download gff for BS10206.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10473-PA 1291..2220 17..946 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:51:06 Download gff for BS10206.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10473-PA 1291..2220 17..946 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:59:13 Download gff for BS10206.3prime
Subject Subject Range Query Range Percent Splice Strand
Acn-RA 1418..2349 13..946 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:53:12 Download gff for BS10206.3prime
Subject Subject Range Query Range Percent Splice Strand
Acn-RA 1418..2349 13..946 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 16:53:12 Download gff for BS10206.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 19046857..19047047 756..946 100 -> Minus
2L 19047152..19047362 545..755 100 -> Minus
2L 19047420..19047654 310..544 100 -> Minus
2L 19047716..19047825 200..309 100 -> Minus
2L 19047914..19048098 13..199 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:59:13 Download gff for BS10206.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19046857..19047047 756..946 100 -> Minus
arm_2L 19047152..19047362 545..755 100 -> Minus
arm_2L 19047420..19047654 310..544 100 -> Minus
arm_2L 19047716..19047825 200..309 100 -> Minus
arm_2L 19047914..19048098 13..199 98   Minus

BS10206.5prime Sequence

908 bp (814 high quality bases) assembled on 2006-04-19

> BS10206.5prime
GAAGTTATCAGTCGACATGAGACGTCGCAGCGAGTTTCCAGCGATTTTCG
GACAGCCATGAGACGTCGCAGCGAGCGAAAAAAGTCGTCGTCGCCCGCTC
CGGTGCCGGTGGCAGTTGCACGGAGAAGTCGCCGCTCCCGCAAGGTGTCG
GAGAACGAGAAGACCGAGGTCGAGACTCCGGTCGTGGCCCAAAATAATGA
GGCCGAATGCCCCAAAGTACCGCCAGCCTCTCAAGAAATCAATGAGGCGC
GGGCATCCAGTGAAGAACGTGCCGGATCTGGAGCATCGCCAGTGCGCAGG
AGTCGCGGCAGCCGGACGACGCCTAGAAAGCGCACGGAGTCCAAGGGCGG
CGACAAGAAGGTGGACACCATACCCGAGGAGGAGCCGGAGAATGGAAAGG
ATGTTGAAAAGGACGCTGTCGAGGAGGAAAAGACTGTAGCGCCACCCGCG
GCTAATGAGAGCGAGTCCGAGGACCGTGCCAAGACGGAGGATCAGCAGGC
TCAAGACGATGAATCCTGTGCTGAACCCGCTGTAGTCAAGGATGATGATG
TTGAGAAAGAGGACTTAAAACCGCAGCAGGAGGTCCCCACTTCCACTGAT
GATGACACCAAGCAGAGCGAGCCAGAACAAGAGGTAAAGGTTCCTTCTCC
TTCCAGCAAGGATGAGGAACATCTAAAAACGACTAGTGATGTATTAGACA
TTCAGACAGAAGAGGTCGATGAAAGGGACGAAGAAGCCTCCGCTCCTGCG
GAGCGCAGAGAAACCAAGAAGAGGCACAAGGAGCAGATAAAGGAACAGCA
ACCCGCAGAGGAGGAGGAACACAAGGGAAAACACAAGCAGATAGACGAAA
ACCCAGAACAAATTCACGATGAACCAGCAGATCTTTCGAACGACAAGCAC
GATCCATG

BS10206.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG10473-PB 2220 CG10473-RB 1..851 58..908 4205 99.7 Plus
CG10473-PA 2220 CG10473-RA 1..851 58..908 4205 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
Acn-RC 3153 CG10473-RC 178..1063 23..908 4400 99.8 Plus
Acn-RB 2513 CG10473-RB 178..1063 23..908 4400 99.8 Plus
Acn-RA 2884 CG10473-RA 93..978 23..908 4400 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:08:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19045532..19046417 23..908 4400 99.8 Plus
Blast to na_te.dros performed on 2015-02-12 11:08:44 has no hits.

BS10206.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:32:43 Download gff for BS10206.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10473-PA 1..851 58..908 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:51:07 Download gff for BS10206.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10473-PA 1..851 58..908 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:12:53 Download gff for BS10206.5prime
Subject Subject Range Query Range Percent Splice Strand
Acn-RA 91..978 20..908 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:33:56 Download gff for BS10206.5prime
Subject Subject Range Query Range Percent Splice Strand
Acn-RA 91..978 20..908 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:33:56 Download gff for BS10206.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19045530..19046417 20..908 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:12:53 Download gff for BS10206.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19045530..19046417 20..908 99   Plus

BS10206.complete Sequence

2293 bp assembled on 2007-11-30

GenBank Submission: KX804893

> BS10206.complete
GAAGTTATCAGTCGACATGAGACGTCGCAGCGAGTTTCCAGCGATTTTCG
GACAGCCATGAGACGTCGCAGCGAGCGAAAAAAGTCGTCGTCGCCCGCTC
CGGTGCCGGTGGCAGTTGCACGGAGAAGTCGCCGCTCCCGCAAGGTGTCG
GAGAACGAGAAGACCGAGGTCGAGACTCCGGTCGTGGCCCAAAATAATGA
GGCCGAATGCCCCAAAGTACCGCCAGCCTCTCAAGAAATCAATGAGGCGC
GGGCATCCAGTGAAGAACGTGCCGGATCTGGAGCATCGCCAGTGCGCAGG
AGTCGCGGCAGCCGGACGACGCCTAGAAAGCGCACGGAGTCCAAGGGCGG
CGACAAGAAGGTGGACACCATACCCGAGGAGGAGCCGGAGAATGGAAAGG
ATGTTGAAAAGGACGCTGTCGAGGAGGAAAAGACTGTAGCGCCACCCGCG
GCTAATGAGAGCGAGTCCGAGGACCGTGCCAAGACGGAGGATCAGCAGGC
TCAAGACGATGAATCCTGTGCTGAACCCGCTGTAGTCAAGGATGATGATG
TTGAGAAAGAGGACTTAAAACCGCAGCAGGAGGTCCCCACTTCCACTGAT
GATGACACCAAGCAGAGCGAGCCAGAACAAGAGGTAAAGGTTCCTTCTCC
TTCCAGCAAGGATGAGGAACATCTAAAAACGACTAGTGATGTATTAGACA
TTCAGACAGAAGAGGTCGATGAAAGGGACGAAGAAGCCTCCGCTCCTGCG
GAGCGCAGAGAAACCAAGAAGAGGCACAAGGAGCAGATAAAGGAACAGCA
ACCCGCAGAGGAGGAGGAACACAAGGAAAACCACAAGCAGATAGACGAAA
ACCCAGAACAAATTCACGATGAACCAGCAGATCTTTCGAACGACAAGCAC
GATCCATGTCTAAACAGCAGCGCAACCAACACAACCGGTGCTCCAGTTCT
GCAGCAACAACGGTCGGTGCGGAAGCGAAAGTGGCTGACTAACAAAAAGT
CTTCGGATCGTACCCCGCCCGTGCTTGCCATTTCGACGGATTCCCTGAAG
AACATTATAGCCGATGTGGTGCAGCCAGTGCCCCTAAGCGATGTGCAACT
GGAATCGTCCTCAGAGGAGGAAGGCCTGGTCACCAGCGATCGCGATTCAG
AGCGATCTGCTTCACCGGCGCCCCCATCTGAAGCAAGCAAAGACCGCGAT
AACAAGGGCAATACCGCCAACACCTGCGACACCACCGCAGAGGCGTCGGC
AGATAATGAAGGAGCAGGAGCCGCTCCTCCAGCAGCAGCAGACACGGTTT
CAGCCCAGGTCAGCCTGAGCAAAGCCACAGTTTCCACGGCAGCACCACAC
ATAGTCCGTGACCCTAGTCCTGCTCGAAACCGCGCCAGCCACGTGCTCTA
TATCACCAATTTGGTACGCCCCTTCACAGTGCTGCAGCTGAAAGGCCTGC
TGGCGCGGACGGGAAAGATCGTTGAGGAAGATGGTTTCTGGATAGATCGG
ATCAAGTCTAAGTGCTATGTTGCCTATTCCACTGAAGACGAGGCCATCGA
AACCCGACATGCCCTGCACGGAGTTCGCTGGCCAGTGTCAAATCCCAAAT
GTTTGAATGTAGATTTTGGCAGTCGCACTGATATGGATCGGGCAATACTT
TCAACGAAGGACGAGGCTCCGAGGTACGGGCAGGAAAACACCAGAGATAA
CCAGCAGTCGGGCAACGCTTGGTCCCGGTTGGAACCGTCTGACAAAAAAC
CTGCGCGACCTGTACGCGAATGGGATGTTGGCAAAAAGGAACCAAGCGAC
CACGACAAACACAGCAACGACAGGCGTCGGGACAGCAAGGATCGACTGGA
CTCGAGGTCTAGGGATGCGGAGCGAGCCGGACAGGAACGAAAGCGTTCTA
GGGACAGAGAGGGGCGAGGACGCGATCGGGAGCGGGAGCGACTTGATCGC
AATGCACATGCAAGGAGCCGCAGTGGATCGCCAGCGTCCAAAACTAAGAA
GGAGAATGAACCGCCTATCAGACTACTAGATGATCTATTTCGAAAAACCA
AGGGAACACCTTGCATATACTGGCTGCCACTTACGCCGGAAGCGATCGCA
GAAAAGGAGGCATTCCGTCAGAAACGCATTGAGGAGCACAAGCTGCGTAT
TAAGGAACGGGAGGAGCGCCAGAAAGAGCGGGAGAAGGATCGTGACCGCC
AGCGCGAGACGCGTCGCAATCGTTCCAACGAACGGCGACGATCTCGCAGT
CGCGAGCGGGAGCGAAGACGTTACTAGAAGCTTTCTAGACCAT

BS10206.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
Acn-RC 2220 CG10473-PC 1..2220 58..2277 11100 100 Plus
Acn-RB 2220 CG10473-PB 1..2220 58..2277 11100 100 Plus
Acn-RA 2220 CG10473-PA 1..2220 58..2277 11100 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:36
Subject Length Description Subject Range Query Range Score Percent Strand
Acn-RC 3153 CG10473-RC 178..2432 23..2277 11275 100 Plus
Acn-RB 2513 CG10473-RB 178..2432 23..2277 11275 100 Plus
Acn-RA 2884 CG10473-RA 93..2347 23..2277 11275 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19045532..19047047 23..1538 7580 100 Plus
2L 23513712 2L 19047420..19047654 1750..1984 1175 100 Plus
2L 23513712 2L 19047152..19047362 1539..1749 1055 100 Plus
2L 23513712 2L 19047913..19048096 2094..2277 920 100 Plus
2L 23513712 2L 19047714..19047825 1983..2094 560 100 Plus
Blast to na_te.dros performed 2014-11-28 01:15:34
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1062..1146 1260..1347 135 64.8 Plus

BS10206.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:11:13 Download gff for BS10206.complete
Subject Subject Range Query Range Percent Splice Strand
hkl-RA 1..2220 58..2277 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:41:29 Download gff for BS10206.complete
Subject Subject Range Query Range Percent Splice Strand
hkl-RA 70..2328 20..2281 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:44:10 Download gff for BS10206.complete
Subject Subject Range Query Range Percent Splice Strand
Acn-RA 87..2347 17..2277 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:45:51 Download gff for BS10206.complete
Subject Subject Range Query Range Percent Splice Strand
hkl-RA 66..2326 17..2277 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:10 Download gff for BS10206.complete
Subject Subject Range Query Range Percent Splice Strand
Acn-RA 87..2347 17..2277 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:10 Download gff for BS10206.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19047914..19048096 2095..2277 100   Plus
2L 19045526..19047047 17..1538 99 -> Plus
2L 19047152..19047362 1539..1749 100 -> Plus
2L 19047420..19047654 1750..1984 100 -> Plus
2L 19047716..19047825 1985..2094 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:44:10 Download gff for BS10206.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19045526..19047047 17..1538 99 -> Plus
arm_2L 19047152..19047362 1539..1749 100 -> Plus
arm_2L 19047420..19047654 1750..1984 100 -> Plus
arm_2L 19047716..19047825 1985..2094 100 -> Plus
arm_2L 19047914..19048096 2095..2277 100   Plus

BS10206.pep Sequence

Translation from 48 to 2276

> BS10206.pep
MRRRSERKKSSSPAPVPVAVARRSRRSRKVSENEKTEVETPVVAQNNEAE
CPKVPPASQEINEARASSEERAGSGASPVRRSRGSRTTPRKRTESKGGDK
KVDTIPEEEPENGKDVEKDAVEEEKTVAPPAANESESEDRAKTEDQQAQD
DESCAEPAVVKDDDVEKEDLKPQQEVPTSTDDDTKQSEPEQEVKVPSPSS
KDEEHLKTTSDVLDIQTEEVDERDEEASAPAERRETKKRHKEQIKEQQPA
EEEEHKENHKQIDENPEQIHDEPADLSNDKHDPCLNSSATNTTGAPVLQQ
QRSVRKRKWLTNKKSSDRTPPVLAISTDSLKNIIADVVQPVPLSDVQLES
SSEEEGLVTSDRDSERSASPAPPSEASKDRDNKGNTANTCDTTAEASADN
EGAGAAPPAAADTVSAQVSLSKATVSTAAPHIVRDPSPARNRASHVLYIT
NLVRPFTVLQLKGLLARTGKIVEEDGFWIDRIKSKCYVAYSTEDEAIETR
HALHGVRWPVSNPKCLNVDFGSRTDMDRAILSTKDEAPRYGQENTRDNQQ
SGNAWSRLEPSDKKPARPVREWDVGKKEPSDHDKHSNDRRRDSKDRLDSR
SRDAERAGQERKRSRDREGRGRDRERERLDRNAHARSRSGSPASKTKKEN
EPPIRLLDDLFRKTKGTPCIYWLPLTPEAIAEKEAFRQKRIEEHKLRIKE
REERQKEREKDRDRQRETRRNRSNERRRSRSRERERRRY*

BS10206.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:14:37
Subject Length Description Subject Range Query Range Score Percent Strand
Acn-PC 739 CG10473-PC 1..739 1..739 3806 100 Plus
Acn-PB 739 CG10473-PB 1..739 1..739 3806 100 Plus
Acn-PA 739 CG10473-PA 1..739 1..739 3806 100 Plus
futsch-PF 5495 CG34387-PF 3456..4145 2..723 243 18.3 Plus
futsch-PE 5495 CG34387-PE 3456..4145 2..723 243 18.3 Plus
futsch-PF 5495 CG34387-PF 3070..3831 6..737 184 17.9 Plus
futsch-PF 5495 CG34387-PF 2951..3702 8..731 177 19 Plus