Clone Sequence Records
BS10207.3prime Sequence
962 bp (836 high quality bases) assembled on 2006-04-19
> BS10207.3prime
ATGGTCTAGAAAGCTTCTACTGCAGTTGATCCTGTTGCTGTTGCTGCAGG
TGCAGGTGCGGATGCGGATGTGGGTGGGTGAGCGTGTGACCGATGCCGCC
GGAGGTCGACGGCAAGTCCAAGGCGTGCGGCACGATGTTGATGGCACTGG
CGGTGCTTGCCGAGGAGGCCAGATCCACGGCCGGCGGACGCACTTCGTCC
TCGAACTGAGCGCCACCGGCCATGCTGTTCAGCACATCCGGAATAGTGGG
CGTGTCCACTAGCTGGTGCAGGTTCTTCAGCTCCGTGGAGCGTAGGCTGG
CGGATAAGCTCTCGCTCGAGGCCAGCGACGTGGATAGCGGTGAGTTGCGT
TCAATGGATGAAGCTATGTCAGTTCTGTCCGTGTCCGGGGAACAGGTGTT
ATGACCTGTTGTTCCTTGCGGCTGCTGCATCATCATCATCAGCTTCTCCT
CCATCTGCATAATTATCTTCTTTTGCACGTCATACTTCTTGTTCACGGAC
TTAAACTTTTCTTCGTACTCATCCTTGACGGTGCTTAGAAGTCGCTTTTG
CTCCGTCATGGCCTTCTCGCTGTTGGCTAGCTGGGCCTGCAGGTCGCTGA
TCTTGTGCTTCATGCTTTCCAGCTGTGATGTCTTCTCGTCCAGGCTGTGC
CTCAGATCCTTCAGTTCCAGGTTGCTGCTCTCTTGTAGCATCTGCAGTTC
CTCGTCGCGGGCCCTGAAGTTATCGATCTCAGCCAGACGGTCGCGGCAAC
GCACTTGCACCTCACCCATGATAATAAACTCGGCCTCCAGTCGTGCCAGC
TCCTGCTTGCACTGCAGCCCAATGTCCGCCTGCTGCTGGGTGTGTTGAAG
CTCGGTTCCCAAACTGAAGACCTGACCTCGCAGAGACTCCAGTTCATAGT
TCATCTCCTTGTGGCGCGCCAACTCGCTGGTGAGTCGCGTCTGCAGGTCA
TCGTTTGCCTGC
BS10207.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6147-PA | 3303 | Tsc1-RA | 2358..3303 | 962..17 | 4730 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 17:11:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tsc1-RA | 3896 | CG6147-RA | 2626..3575 | 962..13 | 4735 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 17:10:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24133976..24134333 | 370..13 | 1775 | 99.7 | Minus |
| 3R | 32079331 | 3R | 24133144..24133448 | 962..658 | 1525 | 100 | Minus |
| 3R | 32079331 | 3R | 24133505..24133663 | 658..500 | 795 | 100 | Minus |
| 3R | 32079331 | 3R | 24133788..24133919 | 501..370 | 660 | 100 | Minus |
Blast to na_te.dros performed 2015-02-06 17:11:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2361 | 64..13 | 143 | 75 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2404 | 76..18 | 142 | 71.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6752..6815 | 76..13 | 140 | 68.8 | Minus |
| gypsy8 | 4955 | gypsy8 GYPSY8 4955bp | 1691..1769 | 496..417 | 136 | 66.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6848 | 101..13 | 135 | 62.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2331..2394 | 76..13 | 131 | 67.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6794 | 76..13 | 131 | 67.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6773..6836 | 76..13 | 131 | 67.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2415 | 101..13 | 126 | 61.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6869..6914 | 58..13 | 122 | 73.9 | Minus |
| X-element | 4740 | X-element ROXELEMENT 4740bp | 1717..1773 | 460..406 | 118 | 70.2 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1100..1164 | 76..12 | 118 | 64.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1542..1598 | 70..13 | 116 | 69 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6773 | 64..13 | 116 | 69.2 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1073..1130 | 70..13 | 110 | 65.5 | Minus |
BS10207.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:32:44 Download gff for
BS10207.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsc1-PA | 2358..3303 | 17..962 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:51:09 Download gff for
BS10207.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6147-PA | 2358..3303 | 17..962 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:30:15 Download gff for
BS10207.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsc1-RA | 2626..3575 | 13..962 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:26:27 Download gff for
BS10207.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsc1-RA | 2626..3575 | 13..962 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:26:27 Download gff for
BS10207.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24133144..24133448 | 658..962 | 100 | -> | Minus |
| 3R | 24133506..24133663 | 500..657 | 100 | -> | Minus |
| 3R | 24133790..24133919 | 370..499 | 100 | -> | Minus |
| 3R | 24133977..24134333 | 13..369 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:30:15 Download gff for
BS10207.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19959228..19959385 | 500..657 | 100 | -> | Minus |
| arm_3R | 19959512..19959641 | 370..499 | 100 | -> | Minus |
| arm_3R | 19958866..19959170 | 658..962 | 100 | -> | Minus |
| arm_3R | 19959699..19960055 | 13..369 | 99 | | Minus |
BS10207.5prime Sequence
817 bp (815 high quality bases) assembled on 2006-04-19
> BS10207.5prime
GAAGTTATCAGTCGACATGGTGATTGAGAAGATCATTGGTGACCTGGAGT
CCAACATGACGCTGGAGAACGAGGAGGCCAAGCGCAAGCTTGTGGAGTTG
CTATCCCAGAACAAGGAGCAGTGGGTGGTAAAGTTCATGCTGGACTACTT
CTTTACAACTGGATCTCAGCGCATTTTGGAGGTACTGGTCAAAGCCCAGG
CACCTCACGATGGGTACATCTTTGACAAGCTGGACGACTGCCTAAAGCAG
TCGCAGCACCGAGTGCAGAGCCTCCAGGTGTTCTGCTTCATTGTGCGCCA
TCACCCTACTTGGCTGTACAAGATCGAGAAACACCGGCTGATCAAAAGTG
TTTTTAAGCTTATGACGCACGAGAAGGAGATAGTTCCGCTGATGAGCGCC
CTGTTGTGCATAATTACTCTGCTGCCGATCATACCGAATTCTGTGCCCAA
CTTTCTTAACGATCTGTTTGAGGTGTTCGGGCATTTGGCCTCGTGGAAGC
TGCAGAATAGCAATAAACTGCCGGACGAGAAGCTCGTCCACCTGCAGTTG
GGTCTACAGATGCTATTTCACCGCCTGTACGGCATGTATCCGTGCAGCTT
TATTGCCTATTTAGTGGAGTTCATCAAGCGAGGCAACGGCGGGGGCATCT
TCCAGCATACAATCAAGCCGCTGTTGAACACTGTGCGAGTGCATCCCATG
CTGGTGACGGCCACGCCAGAGACTGAGGTAAACAATACGCGATGGAAGGA
GATGGAGCCGCATGACGTGGTTATGGAGTGCGCCAACCTATCGCTGCCCG
TCCTCTTGCCCGAGACG
BS10207.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6147-PA | 3303 | Tsc1-RA | 1..801 | 17..817 | 4005 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:42:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tsc1-RA | 3896 | CG6147-RA | 268..1069 | 16..817 | 4010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:42:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24131137..24131587 | 367..817 | 2255 | 100 | Plus |
| 3R | 32079331 | 3R | 24130820..24131076 | 111..367 | 1285 | 100 | Plus |
| 3R | 32079331 | 3R | 24130665..24130759 | 16..110 | 475 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:42:35 has no hits.
BS10207.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:32:45 Download gff for
BS10207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsc1-PA | 1..801 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:51:10 Download gff for
BS10207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6147-PA | 1..801 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:25:50 Download gff for
BS10207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsc1-RA | 265..1069 | 13..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:17:15 Download gff for
BS10207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsc1-RA | 265..1069 | 13..817 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:17:15 Download gff for
BS10207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24130662..24130759 | 13..110 | 98 | -> | Plus |
| 3R | 24130820..24131076 | 111..367 | 100 | -> | Plus |
| 3R | 24131138..24131587 | 368..817 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:25:50 Download gff for
BS10207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19956384..19956481 | 13..110 | 98 | -> | Plus |
| arm_3R | 19956542..19956798 | 111..367 | 100 | -> | Plus |
| arm_3R | 19956860..19957309 | 368..817 | 100 | | Plus |
BS10207.complete Sequence
3335 bp assembled on 2007-11-30
GenBank Submission: FJ636595
> BS10207.complete
GAAGTTATCAGTCGACATGGTGATTGAGAAGATCATTGGTGACCTGGAGT
CCAACATGACGCTGGAGAACGAGGAGGCCAAGCGCAAGCTTGTGGAGTTG
CTATCCCAGAACAAGGAGCAGTGGGTGGTAAAGTTCATGCTGGACTACTT
CTTTACAACTGGATCTCAGCGCATTTTGGAGGTACTGGTCAAAGCCCAGG
CACCTCACGATGGGTACATCTTTGACAAGCTGGACGACTGCCTAAAGCAG
TCGCAGCACCGAGTGCAGAGCCTCCAGGTGTTCTGCTTCATTGTGCGCCA
TCACCCTACTTGGCTGTACAAGATCGAGAAACACCGGCTGATCAAAAGTG
TTTTTAAGCTTATGACGCACGAGAAGGAGATAGTTCCGCTGATGAGCGCC
CTGTTGTGCATAATTACTCTGCTGCCGATCATACCGAATTCTGTGCCCAA
CTTTCTTAACGATCTGTTTGAGGTGTTCGGGCATTTGGCCTCGTGGAAGC
TGCAGAATAGCAATAAACTGCCGGACGAGAAGCTCGTCCACCTGCAGTTG
GGTCTACAGATGCTATTTCACCGCCTGTACGGCATGTATCCGTGCAGCTT
TATTGCCTATTTAGTGGAGTTCATCAAGCGAGGCAACGGCGGGGGCATCT
TCCAGCATACAATCAAGCCGCTGTTGAACACTGTGCGAGTGCATCCCATG
CTGGTGACGGCCACGCCAGAGACTGAGGTAAACAATACGCGATGGAAGGA
GATGGAGCCGCATGACGTGGTTATGGAGTGCGCCAACCTATCGCTGCCCG
TCCTCTTGCCCGAGACGAGCAACGAAGACGGCAGCTATGCGTATCCCATG
ACGCCAGGATACAGTCGCATGACTTCAAATACCTCGAATACGGACTACAG
CTATCAGCTGAGGGAGTTTCAGCAATCGAGAAATGTCTACACCCGCTTCG
ATTCGTTTGCCTCGGGTGATGATGTGGGTCCGATCTGGAGTCCGCATAAC
GAGATTGCCACGACCAGTAGCGGCATACCGCTTACACCCACCACATCGTT
TATTTTGCCACTACAACCGGCTATGAACTCTCAGCTTATGGTTGGCATGA
CTGGCTCCTCACCGCCCGAAGCAGCTGTGGAGGCCACACCGGAAACCACC
CCCTTAAAGGATATGAGGGATATCAAGCAGCCGGGACGTGCGGTCAATTC
GCATGCTGTGAGAGCTATCTTCGCCGTAAGCCAGCCTTCTTCACCCATGC
GCAAGGACCAGCAGAGTCAGTTCAGTTTCCCGGATGTCTCTCGCGAGGCG
GAGGAGAGCAGCCACTCATATCTGGAGGTCAACAGAGGAACTGCCTATGA
CCGTCGCCTGTCGCAGGTCATCCAGGACAGGCATAACGTGGAGCGATCTG
TAAACACACCTTGTCCAAGCAGCCTGCCAGAAATTAACTCCGATTTATCC
CTTGTTGGTGGTTCCGTCTATCCATCTGTCACGCAGGAGGTCGCTGCAGT
TTGTGGCGAGTGCAACGAGACGGATAGGAACCTCTGCAGTGTGGGTGGAC
TTCATATGCCCACCAGCCGATCCATGCACCAGCTGGCAAAGAAGCGCCGC
AATCGTATGGCAAGCTACAGTGGAAATGGTTCCTGTGCGGACAGCAGAAG
TTCGGCGGCAAAGAAGGCAAGTTGGAGTACTGAGGCAGAGAACCCAATGC
GACGAACCAAATCCTGCTCGGCCCTTTCCGGAATGCGGCAGCAGCATCTG
GAGGAGAATGATGACGAGGCCGATTGTTCGAGCCAAAGACAAAGAGGGGA
GAATGGAAATACGCAAAAGACTGGCAGCCGCCTGCAGAGGAGCGGCCGGA
ACCTGGCCATTTCGGCGCCCAAGGATACGGCTAGAAGCTGCACCCATGCC
TCCACCCAGACGGTGGAAGGACTGGACAGTGCTCCAGCGCAGTACGAGAA
TTGGCTTATTGAACTCCTGCTGGAGTGCAAGGAGCAAAGAATCGACTATG
AAAGGAACCTTCTGTACCCGCAAGATATTCTAGACGAATACATTAAGCAT
GCGATCAAGGCCAATGAGTCCTTTGACGCCGAGCAGGGTCAACTGATGTG
CCTACAGCTGGAATACGAAAGCTACCGTCGATCCATTCACGCAGAGCGCA
ATCGACGACTCATGGGGCGAAGCAGGGACAAGCGCAGCCTGGAAATGGAG
CGGGATCGGTTAAGGGAGCAGCTTAAGAACTTCGATGCGAAGAACAAGGA
TCTGGCAAACAAAATGGATCAGGCCATTCGGTTGGCCAACGAGCGCCAGA
ACATCCACCAGGAGGAGCTGGGCGAAATGAGGGCTAAGTACCAGCACGAA
CTGGAGGAAAAGAAGTGCCTGCGGCAGGCAAACGATGACCTGCAGACGCG
ACTCACCAGCGAGTTGGCGCGCCACAAGGAGATGAACTATGAACTGGAGT
CTCTGCGAGGTCAGGTCTTCAGTTTGGGAACCGAGCTTCAACACACCCAG
CAGCAGGCGGACATTGGGCTGCAGTGCAAGCAGGAGCTGGCACGACTGGA
GGCCGAGTTTATTATCATGGGTGAGGTGCAAGTGCGTTGCCGCGACCGTC
TGGCTGAGATCGATAACTTCAGGGCCCGCGACGAGGAACTGCAGATGCTA
CAAGAGAGCAGCAACCTGGAACTGAAGGATCTGAGGCACAGCCTGGACGA
GAAGACATCACAGCTGGAAAGCATGAAGCACAAGATCAGCGACCTGCAGG
CCCAGCTAGCCAACAGCGAGAAGGCCATGACGGAGCAAAAGCGACTTCTA
AGCACCGTCAAGGATGAGTACGAAGAAAAGTTTAAGTCCGTGAACAAGAA
GTATGACGTGCAAAAGAAGATAATTATGCAGATGGAGGAGAAGCTGATGA
TGATGATGCAGCAGCCGCAAGGAACAACAGGTCATAACACCTGTTCCCCG
GACACGGACAGAACTGACATAGCTTCATCCATTGAACGCAACTCACCGCT
ATCCACGTCGCTGGCCTCGAGCGAGAGCTTATCCGCCAGCCTACGCTCCA
CGGAGCTGAAGAACCTGCACCAGCTAGTGGACACGCCCACTATTCCGGAT
GTGCTGAACAGCATGGCCGGTGGCGCTCAGTTCGAGGACGAAGTGCGTCC
GCCGGCCGTGGATCTGGCCTCCTCGGCAAGCACCGCCAGTGCCATCAACA
TCGTGCCGCACGCCTTGGACTTGCCGTCGACCTCCGGCGGCATCGGTCAC
ACGCTCACCCACCCACATCCGCATCCGCACCTGCACCTGCAGCAACAGCA
ACAGGATCAACTGCAGTAGAAGCTTTCTAGACCAT
BS10207.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:38:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tsc1-RA | 3303 | CG6147-PA | 1..3303 | 17..3319 | 16515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:38:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tsc1-RA | 3896 | CG6147-RA | 268..3575 | 16..3323 | 16525 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:38:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24131137..24133448 | 367..2678 | 11560 | 100 | Plus |
| 3R | 32079331 | 3R | 24133976..24134333 | 2966..3323 | 1775 | 99.7 | Plus |
| 3R | 32079331 | 3R | 24130820..24131076 | 111..367 | 1285 | 100 | Plus |
| 3R | 32079331 | 3R | 24133505..24133663 | 2678..2836 | 795 | 100 | Plus |
| 3R | 32079331 | 3R | 24133788..24133919 | 2835..2966 | 660 | 100 | Plus |
| 3R | 32079331 | 3R | 24130665..24130759 | 16..110 | 475 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 00:38:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2361 | 3272..3323 | 143 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2404 | 3260..3318 | 142 | 71.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6752..6815 | 3260..3323 | 140 | 68.8 | Plus |
| gypsy8 | 4955 | gypsy8 GYPSY8 4955bp | 1691..1769 | 2840..2919 | 136 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6848 | 3235..3323 | 135 | 62.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2331..2394 | 3260..3323 | 131 | 67.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6794 | 3260..3323 | 131 | 67.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6773..6836 | 3260..3323 | 131 | 67.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2415 | 3235..3323 | 126 | 61.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6869..6914 | 3278..3323 | 122 | 73.9 | Plus |
| X-element | 4740 | X-element ROXELEMENT 4740bp | 1717..1773 | 2876..2930 | 118 | 70.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1100..1164 | 3260..3324 | 118 | 64.6 | Plus |
BS10207.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:11:14 Download gff for
BS10207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsc1-RA | 1..3303 | 17..3319 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:41:30 Download gff for
BS10207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsc1-RA | 262..3572 | 13..3323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:28:44 Download gff for
BS10207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsc1-RA | 269..3571 | 17..3319 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:49:03 Download gff for
BS10207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsc1-RA | 266..3568 | 17..3319 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:35:32 Download gff for
BS10207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsc1-RA | 269..3571 | 17..3319 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:35:32 Download gff for
BS10207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24133977..24134329 | 2967..3319 | 100 | | Plus |
| 3R | 24130666..24130759 | 17..110 | 100 | -> | Plus |
| 3R | 24130820..24131076 | 111..367 | 100 | -> | Plus |
| 3R | 24131138..24133448 | 368..2678 | 100 | -> | Plus |
| 3R | 24133506..24133663 | 2679..2836 | 100 | -> | Plus |
| 3R | 24133790..24133919 | 2837..2966 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:28:44 Download gff for
BS10207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19956542..19956798 | 111..367 | 100 | -> | Plus |
| arm_3R | 19956388..19956481 | 17..110 | 100 | -> | Plus |
| arm_3R | 19956860..19959170 | 368..2678 | 100 | -> | Plus |
| arm_3R | 19959228..19959385 | 2679..2836 | 100 | -> | Plus |
| arm_3R | 19959512..19959641 | 2837..2966 | 100 | -> | Plus |
| arm_3R | 19959699..19960051 | 2967..3319 | 100 | | Plus |
BS10207.pep Sequence
Translation from 16 to 3318
> BS10207.pep
MVIEKIIGDLESNMTLENEEAKRKLVELLSQNKEQWVVKFMLDYFFTTGS
QRILEVLVKAQAPHDGYIFDKLDDCLKQSQHRVQSLQVFCFIVRHHPTWL
YKIEKHRLIKSVFKLMTHEKEIVPLMSALLCIITLLPIIPNSVPNFLNDL
FEVFGHLASWKLQNSNKLPDEKLVHLQLGLQMLFHRLYGMYPCSFIAYLV
EFIKRGNGGGIFQHTIKPLLNTVRVHPMLVTATPETEVNNTRWKEMEPHD
VVMECANLSLPVLLPETSNEDGSYAYPMTPGYSRMTSNTSNTDYSYQLRE
FQQSRNVYTRFDSFASGDDVGPIWSPHNEIATTSSGIPLTPTTSFILPLQ
PAMNSQLMVGMTGSSPPEAAVEATPETTPLKDMRDIKQPGRAVNSHAVRA
IFAVSQPSSPMRKDQQSQFSFPDVSREAEESSHSYLEVNRGTAYDRRLSQ
VIQDRHNVERSVNTPCPSSLPEINSDLSLVGGSVYPSVTQEVAAVCGECN
ETDRNLCSVGGLHMPTSRSMHQLAKKRRNRMASYSGNGSCADSRSSAAKK
ASWSTEAENPMRRTKSCSALSGMRQQHLEENDDEADCSSQRQRGENGNTQ
KTGSRLQRSGRNLAISAPKDTARSCTHASTQTVEGLDSAPAQYENWLIEL
LLECKEQRIDYERNLLYPQDILDEYIKHAIKANESFDAEQGQLMCLQLEY
ESYRRSIHAERNRRLMGRSRDKRSLEMERDRLREQLKNFDAKNKDLANKM
DQAIRLANERQNIHQEELGEMRAKYQHELEEKKCLRQANDDLQTRLTSEL
ARHKEMNYELESLRGQVFSLGTELQHTQQQADIGLQCKQELARLEAEFII
MGEVQVRCRDRLAEIDNFRARDEELQMLQESSNLELKDLRHSLDEKTSQL
ESMKHKISDLQAQLANSEKAMTEQKRLLSTVKDEYEEKFKSVNKKYDVQK
KIIMQMEEKLMMMMQQPQGTTGHNTCSPDTDRTDIASSIERNSPLSTSLA
SSESLSASLRSTELKNLHQLVDTPTIPDVLNSMAGGAQFEDEVRPPAVDL
ASSASTASAINIVPHALDLPSTSGGIGHTLTHPHPHPHLHLQQQQQDQLQ
*
BS10207.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:24:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tsc1-PA | 1100 | CG6147-PA | 1..1100 | 1..1100 | 5682 | 100 | Plus |
