Clone BS10214 Report

Search the DGRC for BS10214

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:102
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptAcon-RB
Protein status:BS10214.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS10214.3prime Sequence

944 bp (772 high quality bases) assembled on 2006-04-19

> BS10214.3prime
ATGGTCTAGAAAGCTTTTACTGGGCCAGCTCCTTCATGCGGTTGAGAGCG
CTGCCGGCCTTGAACCAGCCGATCTGTAGGTCGTTCAGGGTGTGGTTAAG
CTTGATCCTCTCGACCTTGTCGCCATTCTTGATTTCGGCATCTACGGGCT
TTCCAGGCGCAAGGGATTTCAGGTTGAGCAGGGAGATTTTGCTCGTGGGC
TGGATCTTATCGTAATCAGCGGGATTGGCGAAGGTGAGAGGCAGAAGACC
CTGTTTCTTCAGGTTGGTCTCGTGGATACGGGCGAAGGACTTGACGATAA
TGGCACGACCACCAAGGTGACGGGGCTCCAAAGCGGCATGCTCGCGGGAC
GAACCCTCGCCGTAGTTCTCATCGCCGACGGCCACCCACTTGATGCCGTT
GGCCTTGTAGTCGCGGGCTACGTCGGGAACTCCTCCCCAGCTACCGTTGC
GTTGGTTCTTGATGTTGTTCATCTCGTTGTTTTCGTAGTTGGTGGCTCCG
ATAAACATGTTGTTGGAGATGTTGTCCAAATGGCCACGGTACTTCAGCCA
GGGTCCGGCAGCGGAGATGTGGTCAGTGGTGCACTTTCCCTTAACCTTGA
TCAGCACAGTCAGATCGGTCAGATCCTGGCCGTTCCACTTGTCAAAAGGC
TCCAGCAGCTGCAGACGCGTCGACTTGGGGTCGACAGCCACCTTGACATT
TTCGCCGCTGGGTGGGGGAGCAGTGTAGGTGTCCTGGCCGGGATCGAAAC
CCTTGGCGGGCAGCTCGTCGCCGAAGGGAGCCTTGAGCTTGAACTTCTTG
CCATCAGCACCAGTAAGCTCGTCGGTCAGCGGGTTGAAGTCCAGACGACC
GGCGATGGACAGAGCGGTGACCNACTCGGGACTAGTGACAAAGCAATGGG
TGGCCGGGTTAGCGTCGTTCCTGCCAGTAAAGTTTCGGTTGTAG

BS10214.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG9244-PB 2364 Acon-RB 1437..2364 944..17 4621 99.8 Minus
CG4706-PA 2352 CG4706-RA 2047..2103 304..248 185 92.9 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
Acon-RF 3102 CG9244-RF 1639..2567 944..16 4634 99.9 Minus
Acon-RE 3022 CG9244-RE 1558..2486 944..16 4634 99.9 Minus
Acon-RD 2854 CG9244-RD 1558..2486 944..16 4634 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:21:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21171888..21172398 716..206 2525 99.6 Minus
2L 23513712 2L 21171594..21171828 944..710 1164 99.6 Minus
2L 23513712 2L 21172458..21172649 207..16 960 100 Minus
3R 32079331 3R 11138746..11139579 856..23 930 74.1 Minus
Blast to na_te.dros performed 2015-02-12 13:21:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6413..6485 521..449 122 63 Minus

BS10214.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:32:55 Download gff for BS10214.3prime
Subject Subject Range Query Range Percent Splice Strand
Acon-PB 1437..2364 17..944 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:51:24 Download gff for BS10214.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9244-PB 1437..2364 17..944 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:59:42 Download gff for BS10214.3prime
Subject Subject Range Query Range Percent Splice Strand
Acon-RB 1558..2493 8..944 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:02:59 Download gff for BS10214.3prime
Subject Subject Range Query Range Percent Splice Strand
Acon-RD 1558..2493 8..944 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 17:02:59 Download gff for BS10214.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 21171594..21171828 710..944 99 -> Minus
2L 21171895..21172398 206..709 100 -> Minus
2L 21172460..21172656 8..205 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:59:42 Download gff for BS10214.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21171594..21171828 710..944 99 -> Minus
arm_2L 21171895..21172398 206..709 100 -> Minus
arm_2L 21172460..21172656 8..205 97   Minus

BS10214.5prime Sequence

973 bp (874 high quality bases) assembled on 2006-04-19

> BS10214.5prime
GAAGTTATCAGTCGACATGGCTGCGAGATTGATGAACGCCCAGGCACAGG
TGTGTCGACTGGGCAAGCATGTTGCGTCCGAAGCCACAGTGGTGCGTCAG
TTCCACGCCTCCTGCTACACCGCCTCCAAAGTGGCTCTGTCCAAGTTCGA
CTCGGACGTCTACCTGCCGTACGAGAAGCTGAACAAGCGCCTGGAAGTGG
TGCGCGGTCGCTTGAACCGCCCACTGACTCTCTCCGAGAAGGTGCTGTAC
TCGCATCTGGACGATCCCGCAAACCAGGACATCGTGCGCGGTACTTCGTA
CCTGCGTCTTCGCCCCGATCGTGTGGCTATGCAGGATGCCACTGCACAGA
TGGCTCTGCTTCAGTTTATCTCCTCCGGACTGAAAAAGGTGGCTGTGCCC
TCCACTGTTCACTGTGATCATTTAATCGAGGCCCAGATTGGTGGACCCAA
GGATTTAGCCCGTGCCAAGGACCTGAACAAGGAAGTGTACGATTTCTTGG
CCAGCACCTGTGCAAAGTACGGATTGGGCTTCTGGAAGCCAGGCAGCGGA
ATCATCCATCAGATCATTCTGGAGAACTACGCTTTCCCCGGCCTGCTGAT
GATTGGTACTGACTCACACACCCCCAACGGTGGTGGCTTGGGTGGCCTGT
GCATTGGCGTTGGTGGTGCTGATGCCGTCGATGTGATGGCCGACATCCCC
TGGGAGCTGAAGTGCCCCAAGGTGATTGGTGTCAATTTGACTGGCAAGAT
CAGCGGCTGGACCTCGCCCAAGGATGTTATCCTGAAGGTTGCCGATATCC
TGACCGTCAAGGGAGGCACCGGTGCCATCATTGAGTATCACGGCAAGGGT
GTTGACTCTATCTCTTGTACAGGCATGGCCACCATCTGCAACATGGGTGC
TGAGATCGGAGCTACCACCTCTCTGTTCCCCTTCANCAGCGCATGGCTGA
TTACCTGAATCGACAGGCCGTGC

BS10214.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG9244-PB 2364 Acon-RB 1..919 17..935 4595 100 Plus
CG4706-PA 2352 CG4706-RA 595..647 638..690 165 92.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
Acon-RF 3102 CG9244-RF 202..1161 16..973 4739 99.7 Plus
Acon-RE 3022 CG9244-RE 121..1080 16..973 4739 99.7 Plus
Acon-RD 2854 CG9244-RD 121..1080 16..973 4739 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:01:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21170188..21171116 47..973 4534 99.7 Plus
3R 32079331 3R 11137525..11138117 317..909 1030 78.2 Plus
Blast to na_te.dros performed 2015-02-12 01:01:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 5965..6050 126..41 114 62.1 Minus

BS10214.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:32:56 Download gff for BS10214.5prime
Subject Subject Range Query Range Percent Splice Strand
Acon-PB 1..959 17..973 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:51:26 Download gff for BS10214.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9244-PB 1..959 17..973 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:18:17 Download gff for BS10214.5prime
Subject Subject Range Query Range Percent Splice Strand
Acon-RB 117..1080 13..973 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:53:30 Download gff for BS10214.5prime
Subject Subject Range Query Range Percent Splice Strand
Acon-RD 117..1080 13..973 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:53:30 Download gff for BS10214.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 21168767..21168804 13..49 97 -> Plus
2L 21170191..21171116 50..973 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:18:17 Download gff for BS10214.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21168767..21168804 13..49 97 -> Plus
arm_2L 21170191..21171116 50..973 99   Plus

BS10214.complete Sequence

2396 bp assembled on 2007-11-30

GenBank Submission: FJ636599

> BS10214.complete
GAAGTTATCAGTCGACATGGCTGCGAGATTGATGAACGCCCAGGCACAGG
TGTGTCGACTGGGCAAGCATGTTGCGTCCGAAGCCACAGTGGTGCGTCAG
TTCCACGCCTCCTGCTACACCGCCTCCAAAGTGGCTCTGTCCAAGTTCGA
CTCGGACGTCTACCTGCCGTACGAGAAGCTGAACAAGCGCCTGGAAGTGG
TGCGCGGTCGCTTGAACCGCCCACTGACTCTCTCCGAGAAGGTGCTGTAC
TCGCATCTGGACGATCCCGCAAACCAGGACATCGTGCGCGGTACTTCGTA
CCTGCGTCTTCGCCCCGATCGTGTGGCTATGCAGGATGCCACTGCACAGA
TGGCTCTGCTTCAGTTTATCTCCTCCGGACTGAAAAAGGTGGCTGTGCCC
TCCACTGTTCACTGTGATCATTTAATCGAGGCCCAGATTGGTGGACCCAA
GGATTTAGCCCGTGCCAAGGACCTGAACAAGGAAGTGTACGATTTCTTGG
CCAGCACCTGTGCAAAGTACGGATTGGGCTTCTGGAAGCCAGGCAGCGGA
ATCATCCATCAGATCATTCTGGAGAACTACGCTTTCCCCGGCCTGCTGAT
GATTGGTACTGACTCACACACCCCCAACGGTGGTGGCTTGGGTGGCCTGT
GCATTGGCGTTGGTGGTGCTGATGCCGTCGATGTGATGGCCGACATCCCC
TGGGAGCTGAAGTGCCCCAAGGTGATTGGTGTCAATTTGACTGGCAAGAT
CAGCGGCTGGACCTCGCCCAAGGATGTTATCCTGAAGGTTGCCGATATCC
TGACCGTCAAGGGAGGCACCGGTGCCATCATTGAGTATCACGGCAAGGGT
GTTGACTCTATCTCTTGTACAGGCATGGCCACCATCTGCAACATGGGTGC
TGAGATCGGAGCTACCACCTCTCTGTTCCCCTTCAACCAGCGCATGGCTG
ATTACCTGAAATCGACAGGCCGTGCTGGCATTGCCTCCGAAGCCCAGAAG
TACCAGGCCAAGATTCTGTCCGCTGACAAGAACTGCGAGTACGATGAGCT
GATTGAAATCAACCTAGACACCCTGGAGCCCCATGTTAACGGACCATTCA
CTCCCGATTTGGGCCATCCCATCAGCAAGCTAGGCGAGAACTCGAAGAAG
AACGGGTACCCTATGGACATCCGTGTAGGTCTTATTGGCTCTTGCACCAA
CTCTTCGTATGAGGACATGGGTCGCTGCGCCAGCATCGCCAAGGATGCCA
TGAGCCATGGCCTCAAGTCGAAGATTCCTTTCAATGTGACTCCCGGATCA
GAGCAGATCCGTGCCACCATCGAGCGCGACGGCATCTCTGAGGTGTTCGA
CAAGTTCGGCGGTACCGTTCTGGCCAACGCTTGCGGTCCCTGCATTGGAC
AGTGGGATCGTAAGGACGTTAAGAAGGGCGACAAGAACACCATTGTCACC
TCCTACAACCGAAACTTTACTGGCAGGAACGACGCTAACCCGGCCACCCA
TTGCTTTGTCACTAGTCCCGAGTTGGTCACCGCTCTGTCCATCGCCGGTC
GTCTGGACTTCAACCCGCTGACCGACGAGCTTACTGGTGCTGATGGCAAG
AAGTTCAAGCTCAAGGCTCCCTTCGGCGACGAGCTGCCCGCCAAGGGTTT
CGATCCCGGCCAGGACACCTACACTGCTCCCCCACCCAGCGGCGAAAATG
TCAAGGTGGCTGTCGACCCCAAGTCGACGCGTCTGCAGCTGCTGGAGCCT
TTTGACAAGTGGAACGGCCAGGATCTGACCGATCTGACTGTGCTGATCAA
GGTTAAGGGAAAGTGCACCACTGACCACATCTCCGCTGCCGGACCCTGGC
TGAAGTACCGTGGCCATTTGGACAACATCTCCAACAACATGTTTATCGGA
GCCACCAACTACGAAAACAACGAGATGAACAACATCAAGAACCAACGCAA
CGGTAGCTGGGGAGGAGTTCCCGACGTAGCCCGCGACTACAAGGCCAACG
GCATCAAGTGGGTGGCCGTCGGCGATGAGAACTACGGCGAGGGTTCGTCC
CGCGAGCATGCCGCTTTGGAGCCCCGTCACCTTGGTGGTCGTGCCATTAT
CGTCAAGTCCTTCGCCCGTATCCACGAGACCAACCTGAAGAAACAGGGTC
TTCTGCCTCTCACCTTCGCCAATCCCGCTGATTACGATAAGATCCAGCCC
ACGAGCAAAATCTCCCTGCTCAACCTGAAATCCCTTGCGCCTGGAAAGCC
CGTAGATGCCGAAATCAAGAATGGCGACAAGGTCGAGAGGATCAAGCTTA
ACCACACCCTGAACGACCTACAGATCGGCTGGTTCAAGGCCGGCAGCGCT
CTCAACCGCATGAAGGAGCTGGCCCAGTAAAAGCTTTCTAGACCAT

BS10214.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:28:49
Subject Length Description Subject Range Query Range Score Percent Strand
Acon-RF 2364 CG9244-PF 1..2364 17..2380 11820 100 Plus
Acon-RE 2364 CG9244-PE 1..2364 17..2380 11820 100 Plus
Acon-RD 2364 CG9244-PD 1..2364 17..2380 11820 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:28:50
Subject Length Description Subject Range Query Range Score Percent Strand
Acon-RF 3102 CG9244-RF 202..2567 16..2381 11830 100 Plus
Acon-RE 3022 CG9244-RE 121..2486 16..2381 11830 100 Plus
Acon-RD 2854 CG9244-RD 121..2486 16..2381 11830 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:28:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21170188..21171828 47..1687 8205 100 Plus
2L 23513712 2L 21171888..21172398 1681..2191 2525 99.6 Plus
3R 32079331 3R 11138245..11139579 1040..2374 1560 74.5 Plus
3R 32079331 3R 11137525..11138155 317..947 1055 77.8 Plus
2L 23513712 2L 21172458..21172649 2190..2381 960 100 Plus
Blast to na_te.dros performed 2014-11-26 22:28:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6413..6485 1876..1948 122 63 Plus

BS10214.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:11:17 Download gff for BS10214.complete
Subject Subject Range Query Range Percent Splice Strand
Acon-RB 1..2364 17..2380 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:41:34 Download gff for BS10214.complete
Subject Subject Range Query Range Percent Splice Strand
Acon-RD 152..2528 13..2389 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:59:32 Download gff for BS10214.complete
Subject Subject Range Query Range Percent Splice Strand
Acon-RB 122..2483 17..2378 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:46:35 Download gff for BS10214.complete
Subject Subject Range Query Range Percent Splice Strand
Acon-RB 417..2778 17..2378 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:02:22 Download gff for BS10214.complete
Subject Subject Range Query Range Percent Splice Strand
Acon-RD 122..2483 17..2378 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:02:22 Download gff for BS10214.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21168772..21168804 17..49 100 -> Plus
2L 21170191..21171828 50..1687 100 -> Plus
2L 21171895..21172398 1688..2191 100 -> Plus
2L 21172460..21172646 2192..2378 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:59:32 Download gff for BS10214.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21168772..21168804 17..49 100 -> Plus
arm_2L 21170191..21171828 50..1687 100 -> Plus
arm_2L 21171895..21172398 1688..2191 100 -> Plus
arm_2L 21172460..21172646 2192..2378 100   Plus

BS10214.pep Sequence

Translation from 16 to 2379

> BS10214.pep
MAARLMNAQAQVCRLGKHVASEATVVRQFHASCYTASKVALSKFDSDVYL
PYEKLNKRLEVVRGRLNRPLTLSEKVLYSHLDDPANQDIVRGTSYLRLRP
DRVAMQDATAQMALLQFISSGLKKVAVPSTVHCDHLIEAQIGGPKDLARA
KDLNKEVYDFLASTCAKYGLGFWKPGSGIIHQIILENYAFPGLLMIGTDS
HTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVNLTGKISGWTS
PKDVILKVADILTVKGGTGAIIEYHGKGVDSISCTGMATICNMGAEIGAT
TSLFPFNQRMADYLKSTGRAGIASEAQKYQAKILSADKNCEYDELIEINL
DTLEPHVNGPFTPDLGHPISKLGENSKKNGYPMDIRVGLIGSCTNSSYED
MGRCASIAKDAMSHGLKSKIPFNVTPGSEQIRATIERDGISEVFDKFGGT
VLANACGPCIGQWDRKDVKKGDKNTIVTSYNRNFTGRNDANPATHCFVTS
PELVTALSIAGRLDFNPLTDELTGADGKKFKLKAPFGDELPAKGFDPGQD
TYTAPPPSGENVKVAVDPKSTRLQLLEPFDKWNGQDLTDLTVLIKVKGKC
TTDHISAAGPWLKYRGHLDNISNNMFIGATNYENNEMNNIKNQRNGSWGG
VPDVARDYKANGIKWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFA
RIHETNLKKQGLLPLTFANPADYDKIQPTSKISLLNLKSLAPGKPVDAEI
KNGDKVERIKLNHTLNDLQIGWFKAGSALNRMKELAQ*

BS10214.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:24:47
Subject Length Description Subject Range Query Range Score Percent Strand
Acon-PF 787 CG9244-PF 1..787 1..787 4141 100 Plus
Acon-PE 787 CG9244-PE 1..787 1..787 4141 100 Plus
Acon-PD 787 CG9244-PD 1..787 1..787 4141 100 Plus
Acon-PB 787 CG9244-PB 1..787 1..787 4141 100 Plus
CG4706-PA 783 CG4706-PA 4..776 14..786 3285 79.3 Plus