Clone BS10221 Report

Search the DGRC for BS10221

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:102
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG18749-RB
Protein status:BS10221.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS10221.3prime Sequence

893 bp (824 high quality bases) assembled on 2006-04-19

> BS10221.3prime
ATGGTCTAGAAAGCTTTTATTCTTTTTGGGGTGGGCGTAGGTTCGAGTCT
TTCATACATGGTGTGACAAACATTTGCGGCAGTTCGTTTATCCACTTCGT
GAGCACGTATTTCGAACCGCTTATCACTGGACAAGCTGTGTGCAAAGTTT
TCGAATTTACAGCTCCTGAGTTGTGAAGATTGTACCAGAAAACCGCTGAT
CCCTTCTTGGGCATAACCGTAATATTAAGCATCGGGAAAACTGTGGCGCC
ACCCGAGTCAACTTCTCTCAGGTAGAACAAAACAGTAGCTATACGATCCC
CTTGCTTAAGCCTGGTCGTATTCGTATATTCATGAAAGTCATGGTGCAAT
ATGAAGTGCCCACCTAAGCCGTAATTAATCAGCGAAAATGGATCGCTCAT
CTCCATACTGAGTCCGGTCATATCGGTTACGCGCTCATTGAGTGTTTTAG
CATCTACTATATGTGAGTCCTTGGACGTTCTCACCTCAGACTTCAGACCA
GAAACAGACTCGGATAATCCAAAATCACTCGAGTTTAGCATCCCATCAAT
TTCGGTGTCGTAAATCACATCGTGAAAGACCACCATGTACGGATCTAAGC
CCAGCTCCTCCATTTTTAGAGGGGCAATCCGCGTGAAGGGAGTCGTGGAG
GTGTTGTAGCGACAGTGGAGTTTTTTACTTGGTTTTTGGACCACAGCAGT
GCAGTTTTGCGTAGTCGCCAACACACCCTCAAAGTGTATAACTTCATTAC
TGGCGACTATTCCCTCAGGCTTGTTCTCGAAATGTTGAAAGGCTTCAGTA
AGTTGCTTATTCTTCGCCAGGAGAAGTGCCCATGCCTTGTGCACTTGGTA
TTTTTCGATTATATTATCAAAACGAGTCAAAGAAAGGTTATAC

BS10221.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG18749-PB 1476 CG18749-RB 600..1476 893..17 4385 100 Minus
CG15864-PA 1179 CG15864-RA 825..1002 494..317 715 96 Minus
CG15864-PA 1179 CG15864-RA 648..807 671..512 675 96.8 Minus
CG15864-PA 1179 CG15864-RA 1007..1103 267..171 310 92.7 Minus
CG15864-PA 1179 CG15864-RA 503..590 819..732 240 90.9 Minus
CG15864-PA 1179 CG15864-RA 429..488 893..834 150 90 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:20:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG33722-RE 3544 CG33722-RE 2470..3346 893..17 4385 100 Minus
CG33722-RC 3404 CG33722-RC 2470..3346 893..17 4385 100 Minus
CG18749-RC 3544 CG18749-RC 2470..3346 893..17 4385 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:20:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8246752..8247328 893..317 2885 100 Minus
3R 32079331 3R 8249221..8249794 893..317 2025 90.5 Minus
3R 32079331 3R 8247486..8247651 271..106 830 100 Minus
3R 32079331 3R 8249955..8250120 271..106 530 88 Minus
3R 32079331 3R 8247708..8247797 106..17 450 100 Minus
3R 32079331 3R 8250177..8250266 106..17 435 98.9 Minus
3R 32079331 3R 8247385..8247430 317..272 230 100 Minus
3R 32079331 3R 8249854..8249899 317..272 185 93.5 Minus
Blast to na_te.dros performed on 2015-02-10 17:20:25 has no hits.

BS10221.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:33:10 Download gff for BS10221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18749-PB 600..1476 17..893 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:51:45 Download gff for BS10221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18749-PB 600..1476 17..893 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:21:00 Download gff for BS10221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18749-RB 2470..3350 12..893 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:56:10 Download gff for BS10221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18749-RC 2470..3350 12..893 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:56:10 Download gff for BS10221.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 8246752..8247328 317..893 100 -> Minus
3R 8247386..8247430 272..316 100 -> Minus
3R 8247486..8247651 106..271 100 -> Minus
3R 8247709..8247801 12..105 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:21:00 Download gff for BS10221.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4073108..4073152 272..316 100 -> Minus
arm_3R 4072474..4073050 317..893 100 -> Minus
arm_3R 4073208..4073373 106..271 100 -> Minus
arm_3R 4073431..4073523 12..105 96   Minus

BS10221.5prime Sequence

919 bp (818 high quality bases) assembled on 2006-04-19

> BS10221.5prime
GAAGTTATCAGTCGACATGTACATCTTAAAAAAATTAACGTTTATTGGCT
TTCTGAGTGCTTGTTTTATTAACTGCCAAGGATTTGTCAATTCGAACCCA
AAGAAATCTTATGCTGCCTCAACAATGGAACTGATGAAACTCCTAGAGGT
GGAGGATGAACTGGTAGACAATTTAAAGGGCTATGTGAAAACACTGAAAA
TGAAATTCAATTTAATGGAAAGATCCCTAATAGATATGAGTAGAGAGAAC
ATGGAAATGAAGAGTGATTATGAATCGTACTTGGGAAATCCGTTGAACAG
CTTTCGACTAATACATCGCCTACACACGAGTTGGAGAAAATGGTATCAAT
ATGCCATTAAGGTCGAGAATAATGCTTTAGGGCACATTGAAAATGCCCGA
CTGATGAGAAAGATGCTACCAACCTCGTCGGATTTGCAGCAGGCGTGTCG
CGGAATCCATGACTTGATGTACTTTTACGATTTGAAGCCAGAAGAACTGG
CAGCTGGTAACTTAGCAGGGTACTCGCAGCCAGGAACAGGACTGACAGCT
TACGATTGTTTAGCCCTTGGCGAGTTTGGCGTCCAAAATCAAAAGGATGA
TCTTGCCGAGGCTTGGTATAACCTTTCTTTGACTCGTTTTGATAATATAA
TCGAAAAATACCAAGTGCACAAGGCATGGGCACTTCTCCTGGCGAAGAAT
AAGCAACTTACTGAAGCCTTTCAACATTTCGAGAACAAGCCTGAGGGAAT
AGTCGCCAGTAATGAAGTTATACACTTTGAGGGTGTGTTGGCGACTACGC
AAAACTGCACTGCTGTGGTCCAAAACCAAGTAAAAAACTCCACTGTCGCT
ACAACACCTCCACGACTCCCTTCACGCGGATTGCCCCTCTAAAAATGGAG
GAGCTGGGCTTAGATCCGT

BS10221.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG18749-PB 1476 CG18749-RB 1..809 17..825 4045 100 Plus
CG15864-PA 1179 CG15864-RA 194..488 381..675 1125 95.2 Plus
CG15864-PA 1179 CG15864-RA 33..194 103..264 785 99.3 Plus
CG18749-PB 1476 CG18749-RB 807..904 822..919 490 100 Plus
CG15864-PA 1179 CG15864-RA 648..730 837..919 340 96.3 Plus
CG15864-PA 1179 CG15864-RA 503..590 690..777 240 90.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:02:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG33722-RE 3544 CG33722-RE 1871..2774 17..919 4495 99.9 Plus
CG33722-RC 3404 CG33722-RC 1871..2774 17..919 4495 99.9 Plus
CG18749-RC 3544 CG18749-RC 1871..2774 17..919 4495 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:01:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8246670..8247056 534..919 1885 99.7 Plus
3R 32079331 3R 8249139..8249522 534..919 1175 88.1 Plus
3R 32079331 3R 8245980..8246185 17..222 1030 100 Plus
3R 32079331 3R 8248445..8248654 13..222 975 97.6 Plus
3R 32079331 3R 8246240..8246401 220..381 810 100 Plus
3R 32079331 3R 8248709..8248870 220..381 795 99.4 Plus
3R 32079331 3R 8246452..8246608 378..534 785 100 Plus
3R 32079331 3R 8248921..8249077 378..534 770 99.4 Plus
Blast to na_te.dros performed on 2015-02-12 01:01:58 has no hits.

BS10221.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:33:11 Download gff for BS10221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18749-PB 1..904 17..919 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:51:46 Download gff for BS10221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18749-PB 1..904 17..919 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:18:18 Download gff for BS10221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18749-RB 1865..2774 10..919 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:54:39 Download gff for BS10221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18749-RC 1865..2774 10..919 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:54:39 Download gff for BS10221.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8246243..8246400 223..380 100 -> Plus
3R 8246455..8246608 381..534 100 -> Plus
3R 8246671..8247056 535..919 99   Plus
3R 8245974..8246185 10..222 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:18:18 Download gff for BS10221.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4071696..4071907 10..222 99 -> Plus
arm_3R 4071965..4072122 223..380 100 -> Plus
arm_3R 4072177..4072330 381..534 100 -> Plus
arm_3R 4072393..4072778 535..919 99   Plus

BS10221.complete Sequence

1508 bp (1508 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ636603

> BS10221.complete
GAAGTTATCAGTCGACATGTACATCTTAAAAAAATTAACGTTTATTGGCT
TTCTGAGTGCTTGTTTTATTAACTGCCAAGGATTTGTCAATTCGAACCCA
AAGAAATCTTATGCTGCCTCAACAATGGAACTGATGAAACTCCTAGAGGT
GGAGGATGAACTGGTAGACAATTTAAAGGGCTATGTGAAAACACTGAAAA
TGAAATTCAATTTAATGGAAAGATCCCTAATAGATATGAGTAGAGAGAAC
ATGGAAATGAAGAGTGATTATGAATCGTACTTGGGAAATCCGTTGAACAG
CTTTCGACTAATACATCGCCTACACACGAGTTGGAGAAAATGGTATCAAT
ATGCCATTAAGGTCGAGAATAATGCTTTAGGGCACATTGAAAATGCCCGA
CTGATGAGAAAGATGCTACCAACCTCGTCGGATTTGCAGCAGGCGTGTCG
CGGAATCCATGACTTGATGTACTTTTACGATTTGAAGCCAGAAGAACTGG
CAGCTGGTAACTTAGCAGGGTACTCGCAGCCAGGAACAGGACTGACAGCT
TACGATTGTTTAGCCCTTGGCGAGTTTGGCGTCCAAAATCAAAAGGATGA
TCTTGCCGAGGCTTGGTATAACCTTTCTTTGACTCGTTTTGATAATATAA
TCGAAAAATACCAAGTGCACAAGGCATGGGCACTTCTCCTGGCGAAGAAT
AAGCAACTTACTGAAGCCTTTCAACATTTCGAGAACAAGCCTGAGGGAAT
AGTCGCCAGTAATGAAGTTATACACTTTGAGGGTGTGTTGGCGACTACGC
AAAACTGCACTGCTGTGGTCCAAAAACCAAGTAAAAAACTCCACTGTCGC
TACAACACCTCCACGACTCCCTTCACGCGGATTGCCCCTCTAAAAATGGA
GGAGCTGGGCTTAGATCCGTACATGGTGGTCTTTCACGATGTGATTTACG
ACACCGAAATTGATGGGATGCTAAACTCGAGTGATTTTGGATTATCCGAG
TCTGTTTCTGGTCTGAAGTCTGAGGTGAGAACGTCCAAGGACTCACATAT
AGTAGATGCTAAAACACTCAATGAGCGCGTAACCGATATGACCGGACTCA
GTATGGAGATGAGCGATCCATTTTCGCTGATTAATTACGGCTTAGGTGGG
CACTTCATATTGCACCATGACTTTCATGAATATACGAATACGACCAGGCT
TAAGCAAGGGGATCGTATAGCTACTGTTTTGTTCTACCTGAGAGAAGTTG
ACTCGGGTGGCGCCACAGTTTTCCCGATGCTTAATATTACGGTTATGCCC
AAGAAGGGATCAGCGGTTTTCTGGTACAATCTTCACAACTCAGGAGCTGT
AAATTCGAAAACTTTGCACACAGCTTGTCCAGTGATAAGCGGTTCGAAAT
ACGTGCTCACGAAGTGGATAAACGAACTGCCGCAAATGTTTGTCACACCA
TGTATGAAAGACTCGAACCTACGCCCACCCCAAAAAGAATAAAAGCTTTC
TAGACCAT

BS10221.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:36:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG18749-RC 1476 CG18749-PC 1..1476 17..1492 7380 100 Plus
CG18749-RB 1476 CG18749-PB 1..1476 17..1492 7380 100 Plus
CG15864-RB 1473 CG15864-PB 1..1473 17..1492 5965 93.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:36:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG33722-RE 3544 CG33722-RE 1871..3346 17..1492 7380 100 Plus
CG33722-RC 3404 CG33722-RC 1871..3346 17..1492 7380 100 Plus
CG18749-RC 3544 CG18749-RC 1871..3346 17..1492 7380 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:36:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8246670..8247328 534..1192 3295 100 Plus
3R 32079331 3R 8249139..8249794 534..1192 2330 90.6 Plus
3R 32079331 3R 8245980..8246185 17..222 1030 100 Plus
3R 32079331 3R 8248445..8248654 13..222 975 97.6 Plus
3R 32079331 3R 8247486..8247651 1238..1403 830 100 Plus
3R 32079331 3R 8246240..8246401 220..381 810 100 Plus
3R 32079331 3R 8248709..8248870 220..381 795 99.4 Plus
3R 32079331 3R 8246452..8246608 378..534 785 100 Plus
3R 32079331 3R 8248921..8249077 378..534 770 99.4 Plus
3R 32079331 3R 8249955..8250120 1238..1403 530 88 Plus
3R 32079331 3R 8247708..8247797 1403..1492 450 100 Plus
3R 32079331 3R 8250177..8250266 1403..1492 435 98.9 Plus
3R 32079331 3R 8247385..8247430 1192..1237 230 100 Plus
3R 32079331 3R 8249854..8249899 1192..1237 185 93.5 Plus
Blast to na_te.dros performed on 2014-11-27 13:36:31 has no hits.

BS10221.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:37:30 Download gff for BS10221.complete
Subject Subject Range Query Range Percent Splice Strand
CG18749-RB 1..1476 17..1492 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:23:00 Download gff for BS10221.complete
Subject Subject Range Query Range Percent Splice Strand
CG33722-RC 1861..3346 10..1497 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:55 Download gff for BS10221.complete
Subject Subject Range Query Range Percent Splice Strand
CG18749-RB 1871..3335 17..1481 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:37:30 Download gff for BS10221.complete
Subject Subject Range Query Range Percent Splice Strand
CG33722-RC 1861..3346 10..1497 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:51:46 Download gff for BS10221.complete
Subject Subject Range Query Range Percent Splice Strand
CG18749-RC 1871..3335 17..1481 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:51:46 Download gff for BS10221.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8247486..8247651 1238..1403 100 -> Plus
3R 8247709..8247786 1404..1481 100   Plus
3R 8245980..8246185 17..222 100 -> Plus
3R 8246243..8246400 223..380 100 -> Plus
3R 8246455..8246608 381..534 100 -> Plus
3R 8246671..8247328 535..1192 100 -> Plus
3R 8247386..8247430 1193..1237 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:55 Download gff for BS10221.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4071702..4071907 17..222 100 -> Plus
arm_3R 4071965..4072122 223..380 100 -> Plus
arm_3R 4072177..4072330 381..534 100 -> Plus
arm_3R 4072393..4073050 535..1192 100 -> Plus
arm_3R 4073108..4073152 1193..1237 100 -> Plus
arm_3R 4073208..4073373 1238..1403 100 -> Plus
arm_3R 4073431..4073508 1404..1481 100   Plus

BS10221.pep Sequence

Translation from 16 to 1491

> BS10221.pep
MYILKKLTFIGFLSACFINCQGFVNSNPKKSYAASTMELMKLLEVEDELV
DNLKGYVKTLKMKFNLMERSLIDMSRENMEMKSDYESYLGNPLNSFRLIH
RLHTSWRKWYQYAIKVENNALGHIENARLMRKMLPTSSDLQQACRGIHDL
MYFYDLKPEELAAGNLAGYSQPGTGLTAYDCLALGEFGVQNQKDDLAEAW
YNLSLTRFDNIIEKYQVHKAWALLLAKNKQLTEAFQHFENKPEGIVASNE
VIHFEGVLATTQNCTAVVQKPSKKLHCRYNTSTTPFTRIAPLKMEELGLD
PYMVVFHDVIYDTEIDGMLNSSDFGLSESVSGLKSEVRTSKDSHIVDAKT
LNERVTDMTGLSMEMSDPFSLINYGLGGHFILHHDFHEYTNTTRLKQGDR
IATVLFYLREVDSGGATVFPMLNITVMPKKGSAVFWYNLHNSGAVNSKTL
HTACPVISGSKYVLTKWINELPQMFVTPCMKDSNLRPPQKE*

BS10221.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:36:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG18749-PC 491 CG18749-PC 1..491 1..491 2585 100 Plus
CG18749-PB 491 CG18749-PB 1..491 1..491 2585 100 Plus
CG15864-PB 490 CG15864-PB 1..490 1..491 2342 90.2 Plus
PH4alphaPV-PA 525 CG31015-PA 29..522 29..481 727 36.1 Plus
CG34345-PA 504 CG34345-PA 37..504 32..481 677 34.4 Plus