Clone Sequence Records
BS10230.complete Sequence
2618 bp assembled on 2009-12-07
GenBank Submission: KX805436
> BS10230.complete
GAAGTTATCAGTCGACATGAATGACATATTCACCAACTGCAAGTTGAAGA
ACGGTTTTGGACCGAGCGTACAAGCGACAGCCGCAGCCACATCGCCCACG
AAACGACCCCTCAGCCCCGACCACCCAAACCCAGCGCTGCCCATCACCGA
GACACCGAGTCCTGCTATGAACCGCATGGGCTGGGCCCTACGCACACTAC
TCGTCGCCGACAACTCGAGCTGTCTGAAGGATCGCAAGGTCTCCGGCAAG
CTAATCCGTAAGTGCGCCCCCGGCACCGAGCTCGTCGACTGGCTGGTCAA
CCTCTCGCCCATCGTCCACACCCGAGCCCAGGCGGCTGGCATGTGGCAAG
CGCTCCTCGAGGAAGGAGTACTCGCACACGTCAACAAAGAGCAGCCCTTC
AAGGACAAGTGCTTCCTCTACCGCTTTCGCATCGACGAGGAGGGCGGCAC
GGCGGCAGCGGGCGTGCCCCAGGCGGAGGACCTCGGAGCGGCCAACGAGC
ACATCCGCGAGGCGCTCAGCGCACTCTTCCAGCGCGGACCGGACGCCACA
CTGCGTATGATATTGCGCAAACCTTCTCACGAACGGACATCGGAGGAGCT
GGAGCTGGTCTTCGAGGAACTGGTCCACATTGCCGCACTCTCCCACTTGT
CGACCAGCATAAAGCGGGAACTGTCGTCGATTTTCGTGTTCGAGGCTCAT
GCCCAGGCGGGAACAATATTATTCAATCAAGGCGACGAAGGACGCTCCTG
GTACATCTTACTCAAGGGATCGGTAGACGTTGTGATACACGGCAAGGGAA
CTGTTGCCACTCTGAAGACTGGGGATGATTTCGGGAAACTGGCCTTGATA
AACGACGCACCCAGAGCTGCTACCATCGTACTGAAGGAGAACAATTGCCA
CTTGCTGCGCGTGGACAAGGAACACTTCAACCGGATACTGCGCGATGTGG
AGGCCAATACTCTGAGATTGCAGGAGCACGGCAAGGATGTTTTAGTGCTC
GAGCGCGTGGCTAAGCAACGTGGACAGCATTCGGCATTTAAATATACGGT
GATGTCGGGAACTCCGGCCAAGATGCTGGAGCACCTGCTGGAGACGCGAC
TGGGCCAGTCCGTGGGTGGAATGGATCCGTTCTTGGACGACTTCCTGCTC
ACACACATCGTTTTCATGCCCGTCGTTCAGCTGGTTGATGAATTGGCCAA
TTACTTCCACTGCGATGCCCATGAGGACGCCCAAACGCCCGAGGATCGGG
AGTATATAATCAACTTTAAGAAGCGCGTGATCCAGTTCATGCAAAAGTGG
GTCATGGCCGTCCGCCACGCGGCCTTCGAGGAGCCCAGCGTGTGCGACTT
TATCGAGGACCTCGCCGCCGAGGTGGAGGCCGATCCCGACCTGAACGAGG
AGACCAGCATAGTGCACAACGTGCTCACCCAGATGGCGCGCTACCAGGAG
GACCGCAACCAGAACGCCGGCCAGAAGTGGAAGCTCCCGCCCAACGGCCA
GCCCATCTGCCTTTTCAGTGGCAATGCGACGCCTTCAAAGACGGTCATCC
GACCAGATGATGATATCATCTTCCGCGTTTACTGCGCCGACCACACCTAC
TGTACCCTGCGATTCCCCATGCACACCACGGCGGAGCTCATCAAAGCGTG
TGCCGCCGACAAGCTGCAGCTAAATCGGGGTCCCGAAGATCTCGTCCTCG
TCGAGGTCAAGTCAAACGGGGAGCGGTCCGTGTTCAAGGACAACGATGTC
AGCATACCCACGGGTCTGTCGCTCAACGGCCGCCTTTTCGTCTCCGTCAA
GGACCACCTGGATGCCTTGACCCAACTGCAGGAGCAGGAGTGCCCCACCG
AGGGTGTGGACATCGACCTGGAGATACTGAGCACCAAGGAGCTGGCCTAC
CACATCACCCTGTTCGAGTGGGACCTCTTCTGGGCCGTCCATGAATACGA
ATTGCTCTACCACACCTTCGGGCGGCATCACTTTGGCAAGATCACTGCCA
ACTTGGATGTGTTCCTGCGCCGATTCAACGAGGTGCAGTACTGGATTGTC
ACCGAACTGGTGTCCACTCCCAGTCTGAGCAAACGCGTCGGTCTGGTCCG
GAAGTTCATCAAGCTGGCCGCGTACTGCAAGGAGTACCAGAACCTAAACG
CCTTCTTCGCTGTGGTAATGGGTCTGTCCAACATGGCGGTGTCCAGGCTG
CAACAGACCTGGGAAAAGATTCCGTCGAAGTTCAGGAAGATCTTCCAGGA
GTTCGAGGCCCTGATCGACCCCAGTCGCAACCACAGGGCGTACCGAGTGT
TCGTGGGCAAGCTGCAGCCGCCGTTGATTCCCTTCATGCCGCTCCTGCTC
AAGGACATGACCTTCGCCCATGAGGGCAACAAGACCAGCCTGGACGGCCT
GGTGAACTTCGAGAAGATGCACATGATGGCCCAGACGATGCGCACCATCC
GCTTTTGTCGCTCCAGGAGTCTGGGACTAGAGCCGCCGTCCCCGAAGAGC
GAGGGCGAGGTGAGGTCGTACATCAGCAGCTTCCGCGTCATCGACAACCA
GCGGGTACTCACCGCCATGTCCCAGAAGGTGGAGCCCACCAGGAAGCTCT
AAAAGCTTTCTAGACCAT
BS10230.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Epac-RG | 2586 | CG34392-PG | 1..2586 | 17..2602 | 12930 | 100 | Plus |
| Epac-RF | 2808 | CG34392-PF | 223..2808 | 17..2602 | 12930 | 100 | Plus |
| Epac-RE | 3021 | CG34392-PE | 436..3021 | 17..2602 | 12930 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:25:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Epac-RG | 3662 | CG34392-RG | 343..2928 | 17..2602 | 12930 | 100 | Plus |
| Epac-RF | 4043 | CG34392-RF | 724..3309 | 17..2602 | 12930 | 100 | Plus |
| Epac-RE | 6597 | CG34392-RE | 1080..3665 | 17..2602 | 12930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:25:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6764375..6764736 | 1565..1204 | 1810 | 100 | Minus |
| 2R | 25286936 | 2R | 6762833..6763183 | 2475..2125 | 1755 | 100 | Minus |
| 2R | 25286936 | 2R | 6764051..6764304 | 1819..1566 | 1270 | 100 | Minus |
| 2R | 25286936 | 2R | 6768122..6768315 | 573..380 | 970 | 100 | Minus |
| 2R | 25286936 | 2R | 6765935..6766114 | 1041..862 | 900 | 100 | Minus |
| 2R | 25286936 | 2R | 6763821..6763992 | 1990..1819 | 860 | 100 | Minus |
| 2R | 25286936 | 2R | 6765536..6765697 | 1203..1042 | 810 | 100 | Minus |
| 2R | 25286936 | 2R | 6767415..6767560 | 719..574 | 730 | 100 | Minus |
| 2R | 25286936 | 2R | 6767051..6767195 | 864..720 | 725 | 100 | Minus |
| 2R | 25286936 | 2R | 6768369..6768512 | 380..237 | 720 | 100 | Minus |
| 2R | 25286936 | 2R | 6763467..6763602 | 2124..1989 | 680 | 100 | Minus |
| 2R | 25286936 | 2R | 6762647..6762775 | 2602..2474 | 645 | 100 | Minus |
| 2R | 25286936 | 2R | 6768926..6769024 | 151..53 | 495 | 100 | Minus |
| 2R | 25286936 | 2R | 6768577..6768667 | 240..150 | 455 | 100 | Minus |
| 2R | 25286936 | 2R | 6769306..6769344 | 55..17 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:25:12 has no hits.
BS10230.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:47 Download gff for
BS10230.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Epac-RD | 708..3291 | 17..2600 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:49 Download gff for
BS10230.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Epac-RE | 1080..3663 | 17..2600 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:21:12 Download gff for
BS10230.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Epac-RD | 708..3291 | 17..2600 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:10:59 Download gff for
BS10230.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Epac-RE | 1080..3663 | 17..2600 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:10:59 Download gff for
BS10230.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6768926..6769023 | 54..151 | 100 | <- | Minus |
| 2R | 6769308..6769344 | 17..53 | 100 | | Minus |
| 2R | 6768122..6768314 | 381..573 | 100 | <- | Minus |
| 2R | 6764051..6764304 | 1566..1819 | 100 | <- | Minus |
| 2R | 6768369..6768510 | 239..380 | 100 | <- | Minus |
| 2R | 6768579..6768665 | 152..238 | 100 | <- | Minus |
| 2R | 6762649..6762774 | 2475..2600 | 100 | <- | Minus |
| 2R | 6762834..6763183 | 2125..2474 | 100 | <- | Minus |
| 2R | 6763467..6763600 | 1991..2124 | 100 | <- | Minus |
| 2R | 6763821..6763991 | 1820..1990 | 100 | <- | Minus |
| 2R | 6764375..6764736 | 1204..1565 | 100 | <- | Minus |
| 2R | 6765536..6765697 | 1042..1203 | 100 | <- | Minus |
| 2R | 6765935..6766111 | 865..1041 | 100 | <- | Minus |
| 2R | 6767051..6767195 | 720..864 | 100 | <- | Minus |
| 2R | 6767415..6767560 | 574..719 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:49 Download gff for
BS10230.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2650154..2650279 | 2475..2600 | 100 | <- | Minus |
| arm_2R | 2650339..2650688 | 2125..2474 | 100 | <- | Minus |
| arm_2R | 2650972..2651105 | 1991..2124 | 100 | <- | Minus |
| arm_2R | 2651326..2651496 | 1820..1990 | 100 | <- | Minus |
| arm_2R | 2651556..2651809 | 1566..1819 | 100 | <- | Minus |
| arm_2R | 2651880..2652241 | 1204..1565 | 100 | <- | Minus |
| arm_2R | 2653041..2653202 | 1042..1203 | 100 | <- | Minus |
| arm_2R | 2653440..2653616 | 865..1041 | 100 | <- | Minus |
| arm_2R | 2654556..2654700 | 720..864 | 100 | <- | Minus |
| arm_2R | 2654920..2655065 | 574..719 | 100 | <- | Minus |
| arm_2R | 2655627..2655819 | 381..573 | 100 | <- | Minus |
| arm_2R | 2655874..2656015 | 239..380 | 100 | <- | Minus |
| arm_2R | 2656084..2656170 | 152..238 | 100 | <- | Minus |
| arm_2R | 2656431..2656528 | 54..151 | 100 | <- | Minus |
| arm_2R | 2656813..2656849 | 17..53 | 100 | | Minus |
BS10230.3prime Sequence
923 bp (825 high quality bases) assembled on 2006-04-19
> BS10230.3prime
ATGGTCTAGAAAGCTTTTAGAGCTTCCTGGTGGGCTCCACCTTCTGGGAC
ATGGCGGTGAGTACCCGCTGGTTGTCGATGACGCGGAAGCTGCTGATGTA
CGACCTCACCTCGCCCTCGCTCTTCGGGGACGGCGGCTCTAGTCCCAGAC
TCCTGGAGCGACAAAAGCGGATGGTGCGCATCGTCTGGGCCATCATGTGC
ATCTTCTCGAAGTTCACCAGGCCGTCCAGGCTGGTCTTGTTGCCCTCATG
GGCGAAGGTCATGTCCTTGAGCAGGAGCGGCATGAAGGGAATCAACGGCG
GCTGCAGCTTGCCCACGAACACTCGGTACGCCCTGTGGTTGCGACTGGGG
TCGATCAGGGCCTCGAACTCCTGGAAGATCTTCCTGAACTTCGACGGAAT
CTTTTCCCAGGTCTGTTGCAGCCTGGACACCGCCATGTTGGACAGACCCA
TTACCACAGCGAAGAAGGCGTTTAGGTTCTGGTACTCCTTGCAGTACGCG
GCCAGCTTGATGAACTTCCGGACCAGACCGACGCGTTTGCTCAGACTGGG
AGTGGACACCAGTTCGGTGACAATCCAGTACTGCACCTCGTTGAATCGGC
GCAGGAACACATCCAAGTTGGCAGTGATCTTGCCAAAGTGATGCCGCCCG
AAGGTGTGGTAGAGCAATTCGTATTCATGGACGGCCCAGAAGAGGTCCCA
CTCGAACAGGGTGATGTGGTAGGCCAGCTCCTTGGTGCTCAGTATCTCCA
GGTCGATGTCCACACCCTCGGTGGGGCACTCCTGCTCCTGCAGTTGGGTC
AAGGCATCCAGGTGGTCCTTGACGGAGACGAAAAGGCGGCCGTTGAGCGA
CAGACCCGTGGGTATGCTGACATCGTTGTCCTTTGACACGGACCGCTCCC
CCGTTGACTTGACCTCGACGAGG
BS10230.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3427-PA | 2586 | Epac-RA | 1680..2586 | 923..17 | 4435 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:50:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Epac-RG | 3662 | CG34392-RG | 2022..2928 | 923..17 | 4475 | 99.6 | Minus |
| Epac-RF | 4043 | CG34392-RF | 2403..3309 | 923..17 | 4475 | 99.6 | Minus |
| Epac-RE | 6597 | CG34392-RE | 2759..3665 | 923..17 | 4475 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:49:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6762833..6763183 | 144..494 | 1755 | 100 | Plus |
| 2R | 25286936 | 2R | 6763821..6763992 | 629..800 | 860 | 100 | Plus |
| 2R | 25286936 | 2R | 6763467..6763602 | 495..630 | 680 | 100 | Plus |
| 2R | 25286936 | 2R | 6762647..6762775 | 17..145 | 645 | 100 | Plus |
| 2R | 25286936 | 2R | 6764051..6764174 | 800..923 | 560 | 96.8 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:50:02 has no hits.
BS10230.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:33:29 Download gff for
BS10230.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Epac-PA | 1680..2586 | 17..923 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:52:08 Download gff for
BS10230.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3427-PA | 1680..2586 | 17..923 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:53:15 Download gff for
BS10230.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Epac-RE | 2759..3667 | 13..923 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:56:12 Download gff for
BS10230.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Epac-RE | 2759..3667 | 13..923 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:56:12 Download gff for
BS10230.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6762645..6762774 | 13..144 | 98 | <- | Plus |
| 2R | 6762834..6763183 | 145..494 | 100 | <- | Plus |
| 2R | 6763467..6763600 | 495..628 | 100 | <- | Plus |
| 2R | 6763821..6763991 | 629..799 | 100 | <- | Plus |
| 2R | 6764051..6764174 | 800..923 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:53:15 Download gff for
BS10230.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2650150..2650279 | 13..144 | 98 | <- | Plus |
| arm_2R | 2650339..2650688 | 145..494 | 100 | <- | Plus |
| arm_2R | 2650972..2651105 | 495..628 | 100 | <- | Plus |
| arm_2R | 2651326..2651496 | 629..799 | 100 | <- | Plus |
| arm_2R | 2651556..2651679 | 800..923 | 96 | | Plus |
BS10230.5prime Sequence
925 bp (884 high quality bases) assembled on 2006-04-19
> BS10230.5prime
GAAGTTATCAGTCGACATGAATGACATATTCACCAACTGCAAGTTGAAGA
ACGGTTTTGGACCGAGCGTACAAGCGACAGCCGCAGCCACATCGCCCACG
AAACGACCCCTCAGCCCCGACCACCCAAACCCAGCGCTGCCCATCACCGA
GACACCGAGTCCTGCTATGAACCGCATGGGCTGGGCCCTACGCACACTAC
TCGTCGCCGACAACTCGAGCTGTCTGAAGGATCGCAAGGTCTCCGGCAAG
CTAATCCGTAAGTGCGCCCCCGGCACCGAGCTCGTCGACTGGCTGGTCAA
CCTCTCGCCCATCGTCCACACCCGAGCCCAGGCGGCTGGCATGTGGCAAG
CGCTCCTCGAGGAAGGAGTACTCGCACACGTCAACAAAGAGCAGCCCTTC
AAGGACAAGTGCTTCCTCTACCGCTTTCGCATCGACGAGGAGGGCGGCAC
GGCGGCAGCGGGCGTGCCCCAGGCGGAGGACCTCGGAGCGGCCAACGAGC
ACATCCGCGAGGCGCTCAGCGCACTCTTCCAGCGCGGACCGGACGCCACA
CTGCGTATGATATTGCGCAAACCTTCTCACGAACGGACATCGGAGGAGCT
GGAGCTGGTCTTCGAGGAACTGGTCCACATTGCCGCACTCTCCCACTTGT
CGACCAGCATAAAGCGGGAACTGTCGTCGATTTTCGTGTTCGAGGCTCAT
GCCCAGGCGGGAACAATATTATTCAATCAAGGCGACGAAGGACGCTCCTG
GTACATCTTACTCAAGGGATCGGTAGACGTTGTGATACACGGCAAGGGAA
CTGTTGCCACTCTGAAGACTGGGGATGATTTCGGGAAACTGGCCTTGATA
AACGACGCACCCAGAGCTGCTACCATCGTACTGAAGGAGAAACATTGCAC
TTGCTGCGCGTGGACAAGGAACACT
BS10230.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3427-PA | 2586 | Epac-RA | 1..875 | 17..891 | 4375 | 100 | Plus |
| CG3427-PA | 2586 | Epac-RA | 883..910 | 898..925 | 140 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:37:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Epac-RG | 3662 | CG34392-RG | 343..1252 | 17..925 | 4495 | 99.7 | Plus |
| Epac-RF | 4043 | CG34392-RF | 724..1633 | 17..925 | 4495 | 99.7 | Plus |
| Epac-RE | 6597 | CG34392-RE | 1080..1989 | 17..925 | 4495 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:37:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6768122..6768315 | 573..380 | 970 | 100 | Minus |
| 2R | 25286936 | 2R | 6767415..6767560 | 719..574 | 730 | 100 | Minus |
| 2R | 25286936 | 2R | 6767051..6767195 | 864..720 | 725 | 100 | Minus |
| 2R | 25286936 | 2R | 6768369..6768512 | 380..237 | 720 | 100 | Minus |
| 2R | 25286936 | 2R | 6768926..6769024 | 151..53 | 495 | 100 | Minus |
| 2R | 25286936 | 2R | 6768577..6768667 | 240..150 | 455 | 100 | Minus |
| 2R | 25286936 | 2R | 6766050..6766114 | 925..862 | 245 | 95.4 | Minus |
| 2R | 25286936 | 2R | 6769306..6769344 | 55..17 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 00:37:21 has no hits.
BS10230.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:33:30 Download gff for
BS10230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Epac-PA | 1..910 | 17..925 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:52:10 Download gff for
BS10230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3427-PA | 1..910 | 17..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:00:50 Download gff for
BS10230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Epac-RE | 1075..1989 | 10..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:47:14 Download gff for
BS10230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Epac-RE | 1075..1989 | 10..925 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:47:14 Download gff for
BS10230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6768926..6769023 | 54..151 | 100 | <- | Minus |
| 2R | 6769308..6769349 | 10..53 | 93 | | Minus |
| 2R | 6766050..6766111 | 865..925 | 95 | <- | Minus |
| 2R | 6767051..6767195 | 720..864 | 100 | <- | Minus |
| 2R | 6767415..6767560 | 574..719 | 100 | <- | Minus |
| 2R | 6768122..6768314 | 381..573 | 100 | <- | Minus |
| 2R | 6768369..6768510 | 239..380 | 100 | <- | Minus |
| 2R | 6768579..6768665 | 152..238 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:00:50 Download gff for
BS10230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2655874..2656015 | 239..380 | 100 | <- | Minus |
| arm_2R | 2656084..2656170 | 152..238 | 100 | <- | Minus |
| arm_2R | 2656431..2656528 | 54..151 | 100 | <- | Minus |
| arm_2R | 2656813..2656854 | 10..53 | 93 | | Minus |
| arm_2R | 2653555..2653616 | 865..925 | 95 | <- | Minus |
| arm_2R | 2654556..2654700 | 720..864 | 100 | <- | Minus |
| arm_2R | 2654920..2655065 | 574..719 | 100 | <- | Minus |
| arm_2R | 2655627..2655819 | 381..573 | 100 | <- | Minus |
BS10230.pep Sequence
Translation from 16 to 2601
> BS10230.pep
MNDIFTNCKLKNGFGPSVQATAAATSPTKRPLSPDHPNPALPITETPSPA
MNRMGWALRTLLVADNSSCLKDRKVSGKLIRKCAPGTELVDWLVNLSPIV
HTRAQAAGMWQALLEEGVLAHVNKEQPFKDKCFLYRFRIDEEGGTAAAGV
PQAEDLGAANEHIREALSALFQRGPDATLRMILRKPSHERTSEELELVFE
ELVHIAALSHLSTSIKRELSSIFVFEAHAQAGTILFNQGDEGRSWYILLK
GSVDVVIHGKGTVATLKTGDDFGKLALINDAPRAATIVLKENNCHLLRVD
KEHFNRILRDVEANTLRLQEHGKDVLVLERVAKQRGQHSAFKYTVMSGTP
AKMLEHLLETRLGQSVGGMDPFLDDFLLTHIVFMPVVQLVDELANYFHCD
AHEDAQTPEDREYIINFKKRVIQFMQKWVMAVRHAAFEEPSVCDFIEDLA
AEVEADPDLNEETSIVHNVLTQMARYQEDRNQNAGQKWKLPPNGQPICLF
SGNATPSKTVIRPDDDIIFRVYCADHTYCTLRFPMHTTAELIKACAADKL
QLNRGPEDLVLVEVKSNGERSVFKDNDVSIPTGLSLNGRLFVSVKDHLDA
LTQLQEQECPTEGVDIDLEILSTKELAYHITLFEWDLFWAVHEYELLYHT
FGRHHFGKITANLDVFLRRFNEVQYWIVTELVSTPSLSKRVGLVRKFIKL
AAYCKEYQNLNAFFAVVMGLSNMAVSRLQQTWEKIPSKFRKIFQEFEALI
DPSRNHRAYRVFVGKLQPPLIPFMPLLLKDMTFAHEGNKTSLDGLVNFEK
MHMMAQTMRTIRFCRSRSLGLEPPSPKSEGEVRSYISSFRVIDNQRVLTA
MSQKVEPTRKL*
BS10230.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:32:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Epac-PG | 861 | CG34392-PG | 1..861 | 1..861 | 4485 | 100 | Plus |
| Epac-PF | 935 | CG34392-PF | 75..935 | 1..861 | 4485 | 100 | Plus |
| Epac-PE | 1006 | CG34392-PE | 146..1006 | 1..861 | 4485 | 100 | Plus |
| Epac-PD | 861 | CG34392-PD | 1..861 | 1..861 | 4485 | 100 | Plus |
| PDZ-GEF-PC | 1422 | CG9491-PC | 746..1059 | 503..811 | 414 | 32.9 | Plus |
