Clone Sequence Records
BS10232.3prime Sequence
891 bp (837 high quality bases) assembled on 2006-04-19
> BS10232.3prime
ATGGTCTAGAAAGCTTTTATTCATGTTTAATGATGAATGTTCGAATCTGC
ATTGGATACAATGTGACAGCGAACTCGGCGGCATCTTGCGTCTGGTTAGC
GGACAGCGGCTTGTGGGACGAGGTGTAGTACTCAGGTTCTGATCCCCTAA
TTCCTGAACCCTCAGCGTGGAACTTGAACTGCTTCATGTCACTCAAGGGC
AGGTTGCCATCCAAGGTAGTTTCGCGGATTTCGACTCCGTTCAGGTAGTC
AAAGATCGGGCGAATGTTAAAGCTAACCACTTTGCCTTCGATGTGATCCT
TGAAGTTCTCCACACGCAGCAGAATCTCATCGTCGTTGAAGGGTTCTAGG
GTGAGCAGATGCACCGACTTGGGGAAGTCGTCAAAGCTGGGAACCGACTT
GGCAGCAGCGGTGGTGCTTCCAGTGTTCTTGCTGAAGAACTTCCAAAGGG
GCAGATGGAACTCCTTTTCGGCTTCGCGCTCGGCGGACGTGGACTCGTCG
GCGGCGTTAAGGATTAGGAACACCTTACCACGGGCAATCAAGGGCTGGCC
GTACTTCTCCTCATTCAAGGCCTCTCCCACTCCATAGCCATCATCACGGA
CGAGTCGACGGTGCAGCATAAGTTCAATTTGGCCATCCTTCATGCTGGTG
CCTCCTTGAGCACGATCGTTTAGGATCGCAAGGCGCTTGTTGCTGTCCTG
CAGAGCAATGCGCGATGTGATGGGATAATAGTTTCCGGAAGTAGGCTGGA
CAGCAAGCTCGGGGGTGAAGTCCTCTCGCTTGTCCTTTTCGCGTCTGATC
AACTCGCGTCCATTGGAATCAGTATAGAATACGCCATTGGAGGCAATTTC
ACTGCTGAAGATAGTTACTACTTCCGTGCCAAATTCCTCTT
BS10232.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9466-PA | 2949 | CG9466-RA | 2075..2949 | 891..17 | 4375 | 100 | Minus |
| CG9468-PA | 3024 | CG9468-RA | 2563..2874 | 478..167 | 860 | 91 | Minus |
| CG9468-PA | 3024 | CG9468-RA | 2422..2521 | 619..520 | 400 | 96 | Minus |
| CG9468-PA | 3024 | CG9468-RA | 2321..2357 | 720..684 | 135 | 94.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:30:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9466-RB | 3074 | CG9466-RB | 2142..3016 | 891..17 | 4375 | 100 | Minus |
| CG9466-RA | 3063 | CG9466-RA | 2142..3016 | 891..17 | 4375 | 100 | Minus |
| CG9468-RA | 3160 | CG9468-RA | 2216..3074 | 891..33 | 1955 | 82.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:30:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8773004..8773878 | 17..891 | 4375 | 100 | Plus |
| 2L | 23513712 | 2L | 8777747..8778605 | 33..891 | 1955 | 81.8 | Plus |
Blast to na_te.dros performed on 2015-02-12 18:30:22 has no hits.
BS10232.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:33:33 Download gff for
BS10232.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-PA | 2075..2949 | 17..891 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:52:11 Download gff for
BS10232.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-PA | 2075..2949 | 17..891 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:13:12 Download gff for
BS10232.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-RA | 2142..3025 | 9..891 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:12:04 Download gff for
BS10232.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-RA | 2142..3025 | 9..891 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:12:04 Download gff for
BS10232.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8772995..8773878 | 9..891 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:13:12 Download gff for
BS10232.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8772995..8773878 | 9..891 | 99 | | Plus |
BS10232.5prime Sequence
887 bp (844 high quality bases) assembled on 2006-04-19
> BS10232.5prime
GAAGTTATCAGTCGACATGAAGTTCCTGGGCATCGTCCTTTGCGTTGCCT
TTTTGGCCCTTCAAGCTAAGTCAGCCCAAGCTGTTTGTGGCTATGAGTCT
TGCCATGAAACCAAGTCAAACATGATCAACATACACTTGGTGCCCCACTC
CCACGACGATGTGGGCTGGCTGAAGACCGTTGATCAGTACTACTATGGCC
ACAGGAATAACATTCAGCACGCTGGAGTGCAGTACATCATCGACACCGTG
ATCTCCGAGCTGATCAAGAACCCCGATCGTCGGTTCATCCAGGTGGAGAC
ATCCTTCTTCTCCAAATGGTGGAACGAGCAGTCGGAGACCATGAGGGCAG
TCGTGAAGATGCTGGTGAATGAGGGTCGCCTTCAGTTCATCAATGGAGCC
TGGAGTATGAACGATGAAGCTGCCGTAAACTACCAGAGTGTGATCGACCA
GTTCACAGTCGGATTGAAGTTCCTCGATGACACTTTTGGAGTTTGTGGTC
GTCCTCGTGTTGGATGGCAAATCGATCCCTTTGGTCACTCCCGTGAGCAA
GCCTCTATCTACGCTCAGATGGGATTCGATGGCGAGTTCTTTTCCCGCAT
GGATCACAACGACAAAGGCAGGCGGATGAACGATCTGGCTCTAGAGATGA
TTTGGGATGCCAGTGAGTCGTTGAGCCAAGTCAAGCTCTTCACTGGACTC
CTGTACACCTTCTACTGGGACACTCCCGGCTTTTGCTTCGACGTTCACTG
CAGCGACGATCCAATTATTGACAGTGATAGTTACGATAACAACGTCAAGT
CAAGGGTGGATGATTTCATCGCCTACGCCGCTCAAGTTGCGGAAAAGTTC
CGCACAAACCACATTATGATTCCAATGGGCGGTGACT
BS10232.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:44:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9466-PA | 2949 | CG9466-RA | 1..871 | 17..887 | 4355 | 100 | Plus |
| CG9468-PA | 3024 | CG9468-RA | 95..255 | 108..268 | 355 | 88.8 | Plus |
| CG9468-PA | 3024 | CG9468-RA | 502..594 | 515..607 | 190 | 88.1 | Plus |
| CG9463-PA | 3012 | CG9463-RA | 385..437 | 401..453 | 165 | 92.4 | Plus |
| CG6206-PA | 3243 | CG6206-RA | 514..560 | 500..546 | 160 | 93.6 | Plus |
| CG6206-PB | 3243 | CG6206-RB | 514..560 | 500..546 | 160 | 93.6 | Plus |
| CG6206-PA | 3243 | CG6206-RA | 169..213 | 155..199 | 150 | 93.3 | Plus |
| CG6206-PB | 3243 | CG6206-RB | 169..213 | 155..199 | 150 | 93.3 | Plus |
| CG9468-PA | 3024 | CG9468-RA | 381..443 | 394..456 | 140 | 88.8 | Plus |
| CG9465-PA | 2829 | CG9465-RA | 25..67 | 146..188 | 140 | 93 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:40:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9466-RB | 3074 | CG9466-RB | 68..938 | 17..887 | 4355 | 100 | Plus |
| CG9466-RA | 3063 | CG9466-RA | 68..938 | 17..887 | 4355 | 100 | Plus |
| CG9468-RA | 3160 | CG9468-RA | 138..870 | 85..817 | 1405 | 79.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:40:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8775205..8775623 | 887..469 | 2095 | 100 | Minus |
| 2L | 23513712 | 2L | 8775681..8776055 | 470..96 | 1875 | 100 | Minus |
| 2L | 23513712 | 2L | 8780484..8780846 | 470..108 | 915 | 83.5 | Minus |
| 2L | 23513712 | 2L | 8768175..8768521 | 453..107 | 565 | 77.5 | Minus |
| 2L | 23513712 | 2L | 8780076..8780393 | 817..500 | 510 | 77.4 | Minus |
| 2L | 23513712 | 2L | 8771496..8771769 | 742..469 | 485 | 78.5 | Minus |
| 2L | 23513712 | 2L | 8776116..8776196 | 97..17 | 405 | 100 | Minus |
| 2L | 23513712 | 2L | 8771825..8772176 | 470..119 | 380 | 73.9 | Minus |
| 2L | 23513712 | 2L | 8767750..8768089 | 816..477 | 290 | 72.4 | Minus |
| 2L | 23513712 | 2L | 10458451..10458681 | 101..331 | 270 | 74.5 | Plus |
| 2L | 23513712 | 2L | 10455694..10455826 | 250..118 | 230 | 78.2 | Minus |
| 2L | 23513712 | 2L | 10458888..10459002 | 477..591 | 215 | 79.1 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:40:38 has no hits.
BS10232.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:33:34 Download gff for
BS10232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-PA | 1..871 | 17..887 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:52:12 Download gff for
BS10232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-PA | 1..871 | 17..887 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:52:33 Download gff for
BS10232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-RA | 64..938 | 9..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:49:58 Download gff for
BS10232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-RA | 64..938 | 9..887 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:49:58 Download gff for
BS10232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8775205..8775623 | 469..887 | 100 | <- | Minus |
| 2L | 8775683..8776053 | 98..468 | 100 | <- | Minus |
| 2L | 8776116..8776200 | 9..97 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:52:33 Download gff for
BS10232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8775205..8775623 | 469..887 | 100 | <- | Minus |
| arm_2L | 8775683..8776053 | 98..468 | 100 | <- | Minus |
| arm_2L | 8776116..8776200 | 9..97 | 95 | | Minus |
BS10232.complete Sequence
2981 bp assembled on 2007-11-30
GenBank Submission: FJ636609
> BS10232.complete
GAAGTTATCAGTCGACATGAAGTTCCTGGGCATCGTCCTTTGCGTTGCCT
TTTTGGCCCTTCAAGCTAAGTCAGCCCAAGCTGTTTGTGGCTATGAGTCT
TGCCATGAAACCAAGTCAAACATGATCAACATACACTTGGTGCCCCACTC
CCACGACGATGTGGGCTGGCTGAAGACCGTTGATCAGTACTACTATGGCC
ACAGGAATAACATTCAGCACGCTGGAGTGCAGTACATCATCGACACCGTG
ATCTCCGAGCTGATCAAGAACCCCGATCGTCGGTTCATCCAGGTGGAGAC
ATCCTTCTTCTCCAAATGGTGGAACGAGCAGTCGGAGACCATGAGGGCAG
TCGTGAAGATGCTGGTGAATGAGGGTCGCCTTCAGTTCATCAATGGAGCC
TGGAGTATGAACGATGAAGCTGCCGTAAACTACCAGAGTGTGATCGACCA
GTTCACAGTCGGATTGAAGTTCCTCGATGACACTTTTGGAGTTTGTGGTC
GTCCTCGTGTTGGATGGCAAATCGATCCCTTTGGTCACTCCCGTGAGCAA
GCCTCTATCTACGCTCAGATGGGATTCGATGGCGAGTTCTTTTCCCGCAT
GGATCACAACGACAAAGGCAGGCGGATGAACGATCTGGCTCTAGAGATGA
TTTGGGATGCCAGTGAGTCGTTGAGCCAAGTCAAGCTCTTCACTGGACTC
CTGTACACCTTCTACTGGGACACTCCCGGCTTTTGCTTCGACGTTCACTG
CAGCGACGATCCAATTATTGACAGTGATAGTTACGATAACAACGTCAAGT
CAAGGGTGGATGATTTCATCGCCTACGCCGCTCAAGTTGCGGAAAAGTTC
CGCACAAACCACATTATGATTCCAATGGGCGGTGACTTCCAGTATGAAGA
TGCCGAGGTTAACTACAAGAACATGGACAAACTGATCAAGTACGTCAACG
AACGTCAATCCAGTGGCTCAAAGTACAACATTATCTACTCAACACCCACT
TGCTACTTGAACTCCGTGCACAAGAGTGTGCAGTCCTACCCAAACAAAAC
TCTGGATTTCTTCCCATACGGCAGTGATACTAACAGCTTTTGGACTGGTT
ATTACACCTCCCGTCCCACACAGAAGAGATTCGAGCGCGATGGCAACCAC
ATTCTTCAGGTGGCCAAGCAGCTGAGCGCCTTTGCGGAGCTCTCGAGTAC
ACAACAGAAGGAGGATCTAGAGTACCTTCGCGAGATCATGGGTGTGATGC
AGCACCACGATGCCATCACTGGAACCGAGAAACAGCATGTGTCCGATGAC
TACGATCGCATTCTGTACGACGCTATCGTCGGAGGAGTCAAAACTGCCGG
CGATGCCCTTCGGAAACTGACCAATCTTCCCAACGGAGAGTTCGAGAGTT
GCCTGCAGTTGAACATCAGCGAGTGCGCCTTCACCAAGGATGGCGCCGAC
AACGTAGTGGTGACCCTGTACAATGCATTGGCCCACACCACCAAGCAATA
TGTGCGAGTGCCTGTGAAGAACGAGAACTACCAGGTGACCGATGAGAAGG
GCCGCGTGGTGGCCTCCGAAATTGTTCCAGTGCCAGCGGAGGTCCTGGCT
CTGGAGTTCCGTGATAGCGACACCCAGCACGAATTGGTGTTCAAGGCCTC
CGTTGACAAAATCGCCAATTACTACATCAAGAAGGTTGATAGCAAGGAGA
GTTCCAATGGCGTAAGGGTCATTTCTCAACCTAAGGCGAATGCTGAGACC
TATGATGACGAGGAGACGATTGTGCAGACATCGCTGATCAAGTTGGTGCT
GGACAACAAAACCGGCCTCTTGAAGAGGGTTGAAATGAACGGAGTATCCG
AGAACATTGAGCAGAGCTATGGTCTTTATAGGACCTATGACTCTGGTGCC
TATGTGTTCCGTCAGTACAATCAAGGAGACTTCGTCATCCAGGAAGATGG
TGTCGAGTTCACTGTTTACGATGGAGCTTTAGTCAAGGAAGTTCACCAGC
GTTTCAGCGAATACATTTCGCAGGTCATCCGTATCAGCGAGGACAAGCCT
TACGTGGAATTCGAGTGGCTTGTAGGCCCTATTCCGGTTGAAGAGGAATT
TGGCACGGAAGTAGTAACTATCTTCAGCAGTGAAATTGCCTCCAATGGCG
TATTCTATACTGATTCCAATGGACGCGAGTTGATCAGACGCGAAAAGGAC
AAGCGAGAGGACTTCACCCCCGAGCTTGCTGTCCAGCCTACTTCCGGAAA
CTATTATCCCATCACATCGCGCATTGCTCTGCAGGACAGCAACAAGCGCC
TTGCGATCCTAAACGATCGTGCTCAAGGAGGCACCAGCATGAAGGATGGC
CAAATTGAACTTATGCTGCACCGTCGACTCGTCCGTGATGATGGCTATGG
AGTGGGAGAGGCCTTGAATGAGGAGAAGTACGGCCAGCCCTTGATTGCCC
GTGGTAAGGTGTTCCTAATCCTTAACGCCGCCGACGAGTCCACGTCCGCC
GAGCGCGAAGCCGAAAAGGAGTTCCATCTGCCCCTTTGGAAGTTCTTCAG
CAAGAACACTGGAAGCACCACCGCTGCTGCCAAGTCGGTTCCCAGCTTTG
ACGACTTCCCCAAGTCGGTGCATCTGCTCACCCTAGAACCCTTCAACGAC
GATGAGATTCTGCTGCGTGTGGAGAACTTCAAGGATCACATCGAAGGCAA
AGTGGTTAGCTTTAACATTCGCCCGATCTTTGACTACCTGAACGGAGTCG
AAATCCGCGAAACTACCTTGGATGGCAACCTGCCCTTGAGTGACATGAAG
CAGTTCAAGTTCCACGCTGAGGGTTCAGGAATTAGGGGATCAGAACCTGA
GTACTACACCTCGTCCCACAAGCCGCTGTCCGCTAACCAGACGCAAGATG
CCGCCGAGTTCGCTGTCACATTGTATCCAATGCAGATTCGAACATTCATC
ATTAAACATGAATAAAAGCTTTCTAGACCAT
BS10232.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:50:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9466-RB | 2949 | CG9466-PB | 1..2949 | 17..2965 | 14745 | 100 | Plus |
| CG9466-RA | 2949 | CG9466-PA | 1..2949 | 17..2965 | 14745 | 100 | Plus |
| CG9468-RA | 3024 | CG9468-PA | 72..1687 | 85..1700 | 3340 | 80.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:50:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9466-RB | 3074 | CG9466-RB | 68..3016 | 17..2965 | 14745 | 100 | Plus |
| CG9466-RA | 3063 | CG9466-RA | 68..3016 | 17..2965 | 14745 | 100 | Plus |
| CG9468-RA | 3160 | CG9468-RA | 138..1753 | 85..1700 | 3340 | 80.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:50:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8773004..8774186 | 2965..1783 | 5915 | 100 | Minus |
| 2L | 23513712 | 2L | 8774246..8775089 | 1783..940 | 4220 | 100 | Minus |
| 2L | 23513712 | 2L | 8777747..8778902 | 2949..1794 | 2480 | 81 | Minus |
| 2L | 23513712 | 2L | 8775150..8775623 | 942..469 | 2370 | 100 | Minus |
| 2L | 23513712 | 2L | 8775681..8776055 | 470..96 | 1875 | 100 | Minus |
| 2L | 23513712 | 2L | 8779132..8779856 | 1700..976 | 1795 | 83.2 | Minus |
| 2L | 23513712 | 2L | 8780484..8780846 | 470..108 | 915 | 83.5 | Minus |
| 2L | 23513712 | 2L | 8766818..8767569 | 1691..940 | 865 | 74.3 | Minus |
| 2L | 23513712 | 2L | 8770636..8771248 | 1552..940 | 740 | 74.7 | Minus |
| 2L | 23513712 | 2L | 8779951..8780393 | 942..500 | 670 | 76.7 | Minus |
| 2L | 23513712 | 2L | 8768175..8768521 | 453..107 | 565 | 77.5 | Minus |
| 2L | 23513712 | 2L | 8771296..8771769 | 942..469 | 555 | 74.5 | Minus |
| 2L | 23513712 | 2L | 8776116..8776196 | 97..17 | 405 | 100 | Minus |
| 2L | 23513712 | 2L | 8767625..8768089 | 941..477 | 390 | 72.3 | Minus |
| 2L | 23513712 | 2L | 8771825..8772176 | 470..119 | 380 | 73.9 | Minus |
| 2L | 23513712 | 2L | 10454253..10454554 | 1548..1247 | 310 | 73.5 | Minus |
| 2L | 23513712 | 2L | 10458451..10458681 | 101..331 | 270 | 74.5 | Plus |
| 2L | 23513712 | 2L | 10455694..10455826 | 250..118 | 230 | 78.2 | Minus |
| 2L | 23513712 | 2L | 10458888..10459002 | 477..591 | 215 | 79.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:50:03 has no hits.
BS10232.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:11:29 Download gff for
BS10232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-RA | 1..2949 | 17..2965 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:41:46 Download gff for
BS10232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-RA | 62..3023 | 9..2973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:26:09 Download gff for
BS10232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-RA | 68..3014 | 17..2963 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:47:18 Download gff for
BS10232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-RA | 66..3012 | 17..2963 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:56:54 Download gff for
BS10232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9466-RA | 68..3014 | 17..2963 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:56:54 Download gff for
BS10232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8773006..8774185 | 1784..2963 | 100 | <- | Minus |
| 2L | 8774246..8775089 | 940..1783 | 100 | <- | Minus |
| 2L | 8775153..8775623 | 469..939 | 100 | <- | Minus |
| 2L | 8775683..8776053 | 98..468 | 100 | <- | Minus |
| 2L | 8776116..8776196 | 17..97 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:26:09 Download gff for
BS10232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8773006..8774185 | 1784..2963 | 100 | <- | Minus |
| arm_2L | 8774246..8775089 | 940..1783 | 100 | <- | Minus |
| arm_2L | 8775153..8775623 | 469..939 | 100 | <- | Minus |
| arm_2L | 8775683..8776053 | 98..468 | 100 | <- | Minus |
| arm_2L | 8776116..8776196 | 17..97 | 100 | | Minus |
BS10232.pep Sequence
Translation from 16 to 2964
> BS10232.pep
MKFLGIVLCVAFLALQAKSAQAVCGYESCHETKSNMINIHLVPHSHDDVG
WLKTVDQYYYGHRNNIQHAGVQYIIDTVISELIKNPDRRFIQVETSFFSK
WWNEQSETMRAVVKMLVNEGRLQFINGAWSMNDEAAVNYQSVIDQFTVGL
KFLDDTFGVCGRPRVGWQIDPFGHSREQASIYAQMGFDGEFFSRMDHNDK
GRRMNDLALEMIWDASESLSQVKLFTGLLYTFYWDTPGFCFDVHCSDDPI
IDSDSYDNNVKSRVDDFIAYAAQVAEKFRTNHIMIPMGGDFQYEDAEVNY
KNMDKLIKYVNERQSSGSKYNIIYSTPTCYLNSVHKSVQSYPNKTLDFFP
YGSDTNSFWTGYYTSRPTQKRFERDGNHILQVAKQLSAFAELSSTQQKED
LEYLREIMGVMQHHDAITGTEKQHVSDDYDRILYDAIVGGVKTAGDALRK
LTNLPNGEFESCLQLNISECAFTKDGADNVVVTLYNALAHTTKQYVRVPV
KNENYQVTDEKGRVVASEIVPVPAEVLALEFRDSDTQHELVFKASVDKIA
NYYIKKVDSKESSNGVRVISQPKANAETYDDEETIVQTSLIKLVLDNKTG
LLKRVEMNGVSENIEQSYGLYRTYDSGAYVFRQYNQGDFVIQEDGVEFTV
YDGALVKEVHQRFSEYISQVIRISEDKPYVEFEWLVGPIPVEEEFGTEVV
TIFSSEIASNGVFYTDSNGRELIRREKDKREDFTPELAVQPTSGNYYPIT
SRIALQDSNKRLAILNDRAQGGTSMKDGQIELMLHRRLVRDDGYGVGEAL
NEEKYGQPLIARGKVFLILNAADESTSAEREAEKEFHLPLWKFFSKNTGS
TTAAAKSVPSFDDFPKSVHLLTLEPFNDDEILLRVENFKDHIEGKVVSFN
IRPIFDYLNGVEIRETTLDGNLPLSDMKQFKFHAEGSGIRGSEPEYYTSS
HKPLSANQTQDAAEFAVTLYPMQIRTFIIKHE*
BS10232.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:24:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9466-PB | 982 | CG9466-PB | 1..982 | 1..982 | 5138 | 100 | Plus |
| CG9466-PA | 982 | CG9466-PA | 1..982 | 1..982 | 5138 | 100 | Plus |
| CG9468-PA | 1007 | CG9468-PA | 1..1007 | 1..982 | 4125 | 77.5 | Plus |
| CG9465-PB | 978 | CG9465-PB | 1..978 | 1..982 | 3576 | 68 | Plus |
| CG9463-PB | 1003 | CG9463-PB | 7..1003 | 6..982 | 3571 | 67.5 | Plus |
