Clone Sequence Records
BS10251.3prime Sequence
842 bp (838 high quality bases) assembled on 2006-04-19
> BS10251.3prime
ATGGTCTAGAAAGCTTTTAGAGCTCACTGTGCGGTGTCTTGGTTTCCTCC
TCGGCAGGCGTTGGAGTGATCTCATCTACGGGCTCCTGCTCCTGCTGCTC
CTCCTTTGTCGCCTGTTCCTGCTGCTGCTCGGCGTCCTCCGATTTGGTGT
CATCGCCACTGCCGGAGGCCACCACCTCCTCCTCCTTCTTCTTCTCCTTT
TCAGCAGCGGGCTTCACCTTGGGCTTCCAGATCTTGATCTTGTTAACCAA
GTACTTGACCTCGCGGTCCAGCAGGCTCATTTTGTCCGTTATATCCTTGA
CGGTCAGGCGGATATCCGCGTTCTTGGCCAACTTCTTCTGCGCCGCCGTC
TCCGTCTTGAGCCATGCATTGGTTTCGGTTATCACTTTGTCCAGCGTGTC
GATCTCCACCTGGGTAAAGACGTCCTTCTCGGGATTGGTGTCCTTGGTGA
GATTGCGGCCAGTGACCAGGAACTTTTCGGCGCCATCAATCATGCCCTTG
AGTGCTTTGATAGCCTCTGGTCGCTCCTCGTGTTCCCAGTGGCGAGCCAA
AAAGACGTTGGATAGCTTCTTCAGTTGCGCCAGCTTTTCCTCGTAGATCT
CTGCTTTGGGATCCTCCAGATCCTCATACAGCCATTCACCCAAAGTGCTG
CATTCGGCAAGCAATTTCTCCTTCTCCTCGGCGGTAGCACACTTAGCGTA
CGACTCCTCGTCCAGTTTCTGTTGCACCTCGATTATGTGGGCTTCGAGGG
CATTAAAAGCTGATTCCAAGCGGACACGTTGCTCCTCAGCTTTGTTAATG
GCGGCCAGTTTGGCCACTGATTGATCATACGCGGAACCGACC
BS10251.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:45:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2918-PA | 2772 | CG2918-RA | 1947..2772 | 842..17 | 4130 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:45:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2918-RB | 3387 | CG2918-RB | 2079..2904 | 842..17 | 4130 | 100 | Minus |
| CG2918-RA | 3175 | CG2918-RA | 2144..2969 | 842..17 | 4130 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:45:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2271491..2272316 | 17..842 | 4130 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:45:21 has no hits.
BS10251.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:34:08 Download gff for
BS10251.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-PA | 1947..2772 | 17..842 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:52:56 Download gff for
BS10251.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-PA | 1947..2772 | 17..842 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:52:30 Download gff for
BS10251.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-RA | 2144..2974 | 13..842 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:55:31 Download gff for
BS10251.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-RA | 2144..2974 | 13..842 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:55:31 Download gff for
BS10251.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2271486..2272316 | 13..842 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:52:30 Download gff for
BS10251.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2165519..2166349 | 13..842 | 99 | | Plus |
BS10251.5prime Sequence
901 bp (801 high quality bases) assembled on 2006-04-19
> BS10251.5prime
GAAGTTATCAGTCGACATGAAACTCGTGCTCCTTTTGAGCGCCCTGCTGG
CGGGGATTGCCCTTTCCCAGGGAGCCGCCGTGATGTCCGTGGATCTGGGC
AGCGAGTGGATGAAAGTGGGCGTTGTGTCGCCTGGAGTGCCTATGGAAAT
CGCCCTGAATCGCGAGTCCAAGCGCAAGACGCCCGCGATCCTAGCCTTCC
GCGATGGAACGCGAACCATTGGCGAGGATGCACAAACAATTGGTATCAAG
GATCCCAACTCGGCCTATGGCTATCTTCTGGATTTGCTGGGCAAGACCAT
CGATAATCCCATTGTGGATTTGTATAGGAAACGCTTCCCATACTACAACA
TTGTGGGTGATCCGGAGCGCAACACCGTGGTCTTCCGCAAAAGCGACACC
GATGAATTCTCCGTGGAGGAACTGGTTGCTCAATTGCTGGTCAAGGCCAA
GCAGTTCGCCCAGGAATCCGTACAGCAGCCAATAACCGAGTGCGTCCTAA
CCGTGCCCGGTTACTTTGGCCAAGCCGAAAGGGAAGCTCTCTTGTCCGCC
GCCCAGTTGGCCAATCTTAAGGTACTCCAGCTAATCAACGACTATGCGGC
GGTGGCTCTAAACTACGGCGTCTTCCATCGCGGCGAAATCAACGAAACGG
CCCAGTATTTCCTCTTCTACGATATGGGCGCCTACAAAACCTCAGCCGCT
GTGGTCAGCTATCAGTTGGTGAAGGATAAACAAACCAGGGAGATCAACCC
GGTGGTGCAGGTCCTTGGCGTTGGTTATGATCGCACTCTGGGAGGCCTGG
AGATTAACTAAGATTGCGTGATTATCTGGCGCAGGAGTTTAATGCCCTAA
AGAAGACTAAAACCGATGTGACCACCAGTCCCCGAGCACTGGCCAAACTT
T
BS10251.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:45:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2918-PA | 2772 | CG2918-RA | 1..789 | 17..805 | 3945 | 100 | Plus |
| CG2918-PA | 2772 | CG2918-RA | 791..886 | 806..901 | 480 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:42:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2918-RB | 3387 | CG2918-RB | 132..1018 | 16..901 | 4410 | 99.9 | Plus |
| CG2918-RA | 3175 | CG2918-RA | 197..1083 | 16..901 | 4410 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:42:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2273377..2273954 | 901..325 | 2840 | 99.8 | Minus |
| X | 23542271 | X | 2274025..2274337 | 328..16 | 1565 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 00:42:29 has no hits.
BS10251.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:34:09 Download gff for
BS10251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-PA | 1..886 | 17..901 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:52:57 Download gff for
BS10251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-PA | 1..886 | 17..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:01:46 Download gff for
BS10251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-RA | 192..1083 | 9..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:48:03 Download gff for
BS10251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-RA | 192..1083 | 9..901 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:48:03 Download gff for
BS10251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2273377..2273951 | 328..901 | 99 | <- | Minus |
| X | 2274026..2274342 | 9..327 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:01:46 Download gff for
BS10251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2167410..2167984 | 328..901 | 99 | <- | Minus |
| arm_X | 2168059..2168375 | 9..327 | 99 | | Minus |
BS10251.complete Sequence
2804 bp assembled on 2007-11-30
> BS10251.complete
GAAGTTATCAGTCGACATGAAACTCGTGCTCCTTTTGAGCGCCCTGCTGG
CGGGGATTGCCCTTTCCCAGGGAGCCGCCGTGATGTCCGTGGATCTGGGC
AGCGAGTGGATGAAAGTGGGCGTTGTGTCGCCTGGAGTGCCTATGGAAAT
CGCCCTGAATCGCGAGTCCAAGCGCAAGACGCCCGCGATCCTAGCCTTCC
GCGATGGAACGCGAACCATTGGCGAGGATGCACAAACAATTGGTATCAAG
GATCCCAACTCGGCCTATGGCTATCTTCTGGATTTGCTGGGCAAGACCAT
CGATAATCCCATTGTGGATTTGTATAGGAAACGCTTCCCATACTACAACA
TTGTGGGTGATCCGGAGCGCAACACCGTGGTCTTCCGCAAAAGCGACACC
GATGAATTCTCCGTGGAGGAACTGGTTGCTCAATTGCTGGTCAAGGCCAA
GCAGTTCGCCCAGGAATCCGTACAGCAGCCAATAACCGAGTGCGTCCTAA
CCGTGCCCGGTTACTTTGGCCAAGCCGAAAGGGAAGCTCTCTTGTCCGCC
GCCCAGTTGGCCAATCTTAAGGTACTCCAGCTAATCAACGACTATGCGGC
GGTGGCTCTAAACTACGGCGTCTTCCATCGCGGCGAAATCAACGAAACGG
CCCAGTATTTCCTCTTCTACGATATGGGCGCCTACAAAACCTCAGCCGCT
GTGGTCAGCTATCAGTTGGTGAAGGATAAACAAACCAGGGAGATCAACCC
GGTGGTGCAGGTCCTTGGCGTTGGTTATGATCGCACTCTGGGAGGCCTGG
AGATTCAACTAAGATTGCGTGATTATCTGGCGCAGGAGTTTAATGCCCTA
AAGAAGACTAAAACCGATGTGACCACCAGTCCCCGAGCACTGGCCAAACT
TTTCAAGGAAGCAGGACGACTAAAGAATGTCCTGTCCGCCAATACGGAGT
TCTTCGCTCAAATCGAAAACCTGATAGAGGACATTGACTTTAAATTGCCC
GTCACTCGTGAGAAGCTGGAGCAACTCTGCGAGGATCTTTGGCCCAGGGC
CACAAAACCATTGGAAGAAGCATTGGCCTCGTCGCACCTCAGTCTGGACG
TGATCAACCAGGTGATTTTGTTCGGAGGCGGCACCCGAGTTCCACGTGTG
CAGGAAACCATCAAAGCTGTCATTAAACAGGAGCTGGGTAAAAATCTGAA
TGCCGATGAATCCGCCACTATGGGTGCAGTTTATAAGGCAGCCGACTTAT
CGGCCGGCTTCAAAGTGAAGAAGTTTGTGGTCAAGGATGCCACGCTGTTC
CCCCTGCAAGTGTCCTTCGAACGGGATCCAGGCGATGGTGCTGCCGTAAA
GCAGGTGAAACGTGCCCTGTTTGCCCTAATGAACCCCTATCCCCAAAAGA
AGGTCATTACCTTCAACAAGCACACCGACGATTTTGAGTTCTATGTCAAC
TACGCCGATTTGGATCGTTATAGCAAGGAGGAGATTGCCGCTCTGGGCAG
CTTGAACGTGACCAAGGTGCAGCTGAAGCAGGTGAAGGAGCTGCTGGAGA
AATCGAAAAAGGAACTGGTGGATAACAAGGGCATCAAGGCTTACTTCTAC
CTGGATGACTCTGGCATTTTCCGCTGCACAGGAGTTGAGTACGTGTACGA
GAAACAAAAGCCTGAGGACGATGCTGATGAAGACAGCACTTTGTCCAAGT
TTGGCAGCACTTTGAGTAAATTGTTTACCAAGGAGGGTGAGGAGAAGAAG
GACAATTCGGAACAGGAAGAGGCAGCTAATGCAGGCGAAGAGCCATCTAA
ATCAGAAGATAATGAAAAGGCCAAGGAAGAGGATGCTAGCAAGGAGCAAA
AGTCTGAGGAGAGCACAAAACAAGATACCGAAGCCAAAAACGAAACAATC
AAGCTTGTTACGGTCAAGTCCCCGGTGACGTATGAGTCCCAAACGCAGTT
TGTTGTTCCTCTGGTCGGTTCCGCGTATGATCAATCAGTGGCCAAACTGG
CCGCCATTAACAAAGCTGAGGAGCAACGTGTCCGCTTGGAATCAGCTTTT
AATGCCCTCGAAGCCCACATAATCGAGGTGCAACAGAAACTGGACGAGGA
GTCGTACGCTAAGTGTGCTACCGCCGAGGAGAAGGAGAAATTGCTTGCCG
AATGCAGCACTTTGGGTGAATGGCTGTATGAGGATCTGGAGGATCCCAAA
GCAGAGATCTACGAGGAAAAGCTGGCGCAACTGAAGAAGCTATCCAACGT
CTTTTTGGCTCGCCACTGGGAACACGAGGAGCGACCAGAGGCTATCAAAG
CACTCAAGGGCATGATTGATGGCGCCGAAAAGTTCCTGGTCACTGGCCGC
AATCTCACCAAGGACACCAATCCCGAGAAGGACGTCTTTACCCAGGTGGA
GATCGACACGCTGGACAAAGTGATAACCGAAACCAATGCATGGCTCAAGA
CGGAGACGGCGGCGCAGAAGAAGTTGGCCAAGAACGCGGATATCCGCCTG
ACCGTCAAGGATATAACGGACAAAATGAGCCTGCTGGACCGCGAGGTCAA
GTACTTGGTTAACAAGATCAAGATCTGGAAGCCCAAGGTGAAGCCCGCTG
CTGAAAAGGAGAAGAAGAAGGAGGAGGAGGTGGTGGCCTCCGGCAGTGGC
GATGACACCAAATCGGAGGACGCCGAGCAGCAGCAGGAACAGGCGACAAA
GGAGGAGCAGCAGGAGCAGGAGCCCGTAGATGAGATCACTCCAACGCCTG
CCGAGGAGGAAACCAAGACACCGCACAGTGAGCTCTAAAAGCTTTCTAGA
CCAT
BS10251.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:30:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2918-RB | 2772 | CG2918-PB | 1..2772 | 17..2788 | 13860 | 100 | Plus |
| CG2918-RA | 2772 | CG2918-PA | 1..2772 | 17..2788 | 13860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2918-RB | 3387 | CG2918-RB | 132..2904 | 16..2788 | 13865 | 100 | Plus |
| CG2918-RA | 3175 | CG2918-RA | 197..2969 | 16..2788 | 13865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2271491..2273954 | 2788..325 | 12320 | 100 | Minus |
| X | 23542271 | X | 2274025..2274337 | 328..16 | 1565 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:30:56 has no hits.
BS10251.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:11:34 Download gff for
BS10251.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-RA | 1..2772 | 17..2788 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:41:53 Download gff for
BS10251.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-RA | 202..2984 | 9..2792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:10:54 Download gff for
BS10251.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-RA | 198..2967 | 17..2786 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:32:54 Download gff for
BS10251.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-RA | 208..2977 | 17..2786 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:22:50 Download gff for
BS10251.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2918-RA | 198..2967 | 17..2786 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:22:50 Download gff for
BS10251.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2271493..2273951 | 328..2786 | 100 | <- | Minus |
| X | 2274026..2274336 | 17..327 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:10:54 Download gff for
BS10251.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2165526..2167984 | 328..2786 | 100 | <- | Minus |
| arm_X | 2168059..2168369 | 17..327 | 100 | | Minus |
BS10251.pep Sequence
Translation from 16 to 2787
> BS10251.pep
MKLVLLLSALLAGIALSQGAAVMSVDLGSEWMKVGVVSPGVPMEIALNRE
SKRKTPAILAFRDGTRTIGEDAQTIGIKDPNSAYGYLLDLLGKTIDNPIV
DLYRKRFPYYNIVGDPERNTVVFRKSDTDEFSVEELVAQLLVKAKQFAQE
SVQQPITECVLTVPGYFGQAEREALLSAAQLANLKVLQLINDYAAVALNY
GVFHRGEINETAQYFLFYDMGAYKTSAAVVSYQLVKDKQTREINPVVQVL
GVGYDRTLGGLEIQLRLRDYLAQEFNALKKTKTDVTTSPRALAKLFKEAG
RLKNVLSANTEFFAQIENLIEDIDFKLPVTREKLEQLCEDLWPRATKPLE
EALASSHLSLDVINQVILFGGGTRVPRVQETIKAVIKQELGKNLNADESA
TMGAVYKAADLSAGFKVKKFVVKDATLFPLQVSFERDPGDGAAVKQVKRA
LFALMNPYPQKKVITFNKHTDDFEFYVNYADLDRYSKEEIAALGSLNVTK
VQLKQVKELLEKSKKELVDNKGIKAYFYLDDSGIFRCTGVEYVYEKQKPE
DDADEDSTLSKFGSTLSKLFTKEGEEKKDNSEQEEAANAGEEPSKSEDNE
KAKEEDASKEQKSEESTKQDTEAKNETIKLVTVKSPVTYESQTQFVVPLV
GSAYDQSVAKLAAINKAEEQRVRLESAFNALEAHIIEVQQKLDEESYAKC
ATAEEKEKLLAECSTLGEWLYEDLEDPKAEIYEEKLAQLKKLSNVFLARH
WEHEERPEAIKALKGMIDGAEKFLVTGRNLTKDTNPEKDVFTQVEIDTLD
KVITETNAWLKTETAAQKKLAKNADIRLTVKDITDKMSLLDREVKYLVNK
IKIWKPKVKPAAEKEKKKEEEVVASGSGDDTKSEDAEQQQEQATKEEQQE
QEPVDEITPTPAEEETKTPHSEL*
BS10251.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:07:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2918-PB | 923 | CG2918-PB | 1..923 | 1..923 | 4642 | 100 | Plus |
| CG2918-PA | 923 | CG2918-PA | 1..923 | 1..923 | 4642 | 100 | Plus |
| Hsc70Cb-PH | 836 | CG6603-PH | 2..808 | 21..879 | 664 | 25.6 | Plus |
| Hsc70Cb-PG | 836 | CG6603-PG | 2..808 | 21..879 | 664 | 25.6 | Plus |
| Hsc70Cb-PI | 804 | CG6603-PI | 2..776 | 21..879 | 655 | 25.3 | Plus |
