Clone BS10269 Report

Search the DGRC for BS10269

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:102
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG11353-RA
Protein status:BS10269.pep: full length peptide match
Sequenced Size:2297

Clone Sequence Records

BS10269.complete Sequence

2297 bp assembled on 2009-12-07

GenBank Submission: KX803281

> BS10269.complete
GAAGTTATCAGTCGACATGGAGATCAGGCGCACCTCTCGACCATATCTTT
GGTACACACCAGTGCTGATGCTGCTCGGCCTTTGGCTGGGTTCGGTTTTG
GCCAAGGGCGCTAGCAATCAGTCGGCCACTACCAACTCACACGCCTGGCA
GCGATATCACAGTCAGGCACTCAATGCGTCGCCAGCGCTGCCCGATGAAT
TGGAAATATTGGATGCCCCCTCTACGATTGAGATACATTCGCCTCATGAA
ACCCATTTGACACGCACCTCCGTCATTTTCGGACTGACCAAAGTGGCCAA
CGAGAGCAGCGTCAGCCAAAAGTGCCACGCGCAGCTGCGACAAATGCAGC
GCGGCATACTCGGCAAACAGCCATGGGCCATGAAGGTTCTGGATGCTTCG
GGAACAAAGCCCTCCGGCTTTGTATATGGTCAAAACTACTGGCTGGGAAG
TCGCGAAGCTTGTCGCGGCGTCCAAAGACCCGTGGGCATAACCCTATCAA
AGAACTTCGATCGTGTTATGCACTATGGAATTATCACCCAGCAGGCGCCC
TTCGACATGGACTATCGGGTTTTATACCTACGTCACAATTCTCCGTGGCA
AGTGGAGATTAAGCTGATGTCTGAGCAGATTATACACATTGGCCTGTGCC
TGCCAAGTGCCTGCAGTTCGGTTGAAGTTCAGAGTCTGGCCCAGGACTAT
GTGGCTGGCGGAATGTTCACTGAAAACGAGATATTCGACATAAAGCCGGA
AGTGGTTTACATGAAGGATCTGCAGCTGAAGGATGAATTCTTCGAGAGGG
CCAGCTTTCGTCTCTTGGTGGCCTGTGTTCTGCTCACTGTCACTCTGATG
TTTTGTGCTCAACAACTGCATGCGACTAGTAAAATGCCATCTATTTCTGT
GGATCCTCTGGATCGTGACTTGGCACCCGCGGAATCGGAAATATGGCGTG
GACTTAACTCCCTGCTCCAAATAGAGAGACTGCAGCGATATGTAACTTGC
TGGGATGTTCCCGGCAATTGGGCCAAAATTTTTGCGATTAGGGAGAATAC
TGCGAATGAAATTCCCTTGATGAATGGCCTGCGATCTGTATGCGCTATCT
GGATCATGGTCTTCCATGTGGTATGGTTCATGTACTTTACTGTCCACAAT
AAGACGGTGCTGATTTCGTATGCCGAACAGGCCTTCTTCCAATATGTCTC
GTCGGCTCCTCTGCTCGTGGATGTCTTCTTTACCATCAGTGGCTTCCTGC
AAACATTTAACTTCCTCAGGAACTCCCGGCAGTTGGAGGCAGTACGGCAA
AATAGCTTCAGCGAAAATCTAAAACTCTTTGGCAAACTGCTCTTCCATCG
TTATTTGCGTCTTGGACCTCTTTACCTGGTGGTCATGGCCACCGTGGACT
TGGTATACGCCTATATTGGAGATGTCTCAGTTTACCACATCAACGAGCGA
TTCGATGAGATGTGTACACGTCACTGGTGGCGCAATCTTTTGTTCATTCA
AAACCTCTTCGACCATCGGGACATGTGCGCCAATTGGAGTTGGTCCTTGG
CCTGCGAAATGCAGTTCTTTATCCTGGCCAACGCTCTGCTGTTCCTCTAT
GTGAAATATCCCAAGGTGGTAAAGTCTCTAGTGGTATCTTCTTTTGTGGC
CACCATCGCTTGGTCCTACGGCATCGGACTGAGCATCAAGTTCCAATTGT
CCTTCGACGCGGCCTTTGCCACTGGAACAGAGATCTATACATCGCCCTTC
GTAAGGGTCCTTCCATATATCCTGGGAGCTGTAACGGCTTGGCTATTGCA
AGAGAATCGAGTCCAGTTGGAGATCAGCGAGCAAAAGGAACGGGCATGCT
GGCACTTCGCCTTATTCGTCTTCTTCGCCTGCATTTATTCGACTGTCAAA
CGGGATCTTGGACCTCTGATGGCCATCACGCTTTTTGTGATGGGTCGCCT
GTTCTTTTCGCTTAGTGTATGCTGGATGATAGCGCGCAGCTGCGATGGCC
GGGGGGTGTGGTGGTCACGCCTGCTGGAGGCCAAGGGCTTCCAACATGTC
AGTCGACTGTCCTACGCCATTTACCTTCTCAATCCGCTGGTCATAGCGTT
ATTCTACAGTTTAACCAACGCGAGCACACATGCGGATCCTTTCATGCTGT
GCGTGGTGACCTGCGGCTTTGCTGTCATAGTCTACCTGGCTTCCATCCTC
TTTTCGCTGGCCTTTGAGCTGCCCTTCAGCAATCTTTCAAGTTTGCTAAA
TCGACGGCAGAGCAAGCCAAAATCGATTTAAAAGCTTTCTAGACCAT

BS10269.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG11353-RB 2265 CG11353-PB 1..2265 17..2281 11325 100 Plus
CG11353-RA 2265 CG11353-PA 1..2265 17..2281 11325 100 Plus
CG30471-RB 2208 CG30471-PB 991..1512 1061..1582 975 79.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:25:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG11353-RB 3115 CG11353-RB 578..2844 16..2282 11335 100 Plus
CG11353-RA 2910 CG11353-RA 373..2639 16..2282 11335 100 Plus
CG30471-RB 2435 CG30471-RB 1086..1607 1061..1582 975 79.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:25:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4536889..4537742 386..1239 4270 100 Plus
3L 28110227 3L 4538251..4538794 1606..2149 2720 100 Plus
3L 28110227 3L 4535993..4536363 16..386 1855 100 Plus
3L 28110227 3L 4537813..4538180 1238..1605 1840 100 Plus
3L 28110227 3L 4538866..4538999 2149..2282 670 100 Plus
2R 25286936 2R 15536492..15536837 1237..1582 545 77.2 Plus
2R 25286936 2R 15536250..15536428 1061..1239 445 83.2 Plus
2R 25286936 2R 15535596..15535983 392..779 365 72.9 Plus
2R 25286936 2R 15537536..15537622 2161..2247 210 82.8 Plus
2R 25286936 2R 15535384..15535525 245..386 200 76.1 Plus
Blast to na_te.dros performed on 2014-11-28 02:25:07 has no hits.

BS10269.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:46 Download gff for BS10269.complete
Subject Subject Range Query Range Percent Splice Strand
CG11353-RB 570..2832 17..2279 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:46 Download gff for BS10269.complete
Subject Subject Range Query Range Percent Splice Strand
CG11353-RA 374..2636 17..2279 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:11:12 Download gff for BS10269.complete
Subject Subject Range Query Range Percent Splice Strand
CG11353-RA 372..2634 17..2279 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:10:57 Download gff for BS10269.complete
Subject Subject Range Query Range Percent Splice Strand
CG11353-RA 374..2636 17..2279 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:10:57 Download gff for BS10269.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4535994..4536363 17..386 100 -> Plus
3L 4536890..4537742 387..1239 100 -> Plus
3L 4537815..4538180 1240..1605 100 -> Plus
3L 4538251..4538794 1606..2149 100 -> Plus
3L 4538867..4538996 2150..2279 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:46 Download gff for BS10269.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4537815..4538180 1240..1605 100 -> Plus
arm_3L 4535994..4536363 17..386 100 -> Plus
arm_3L 4536890..4537742 387..1239 100 -> Plus
arm_3L 4538251..4538794 1606..2149 100 -> Plus
arm_3L 4538867..4538996 2150..2279 100   Plus

BS10269.3prime Sequence

903 bp (842 high quality bases) assembled on 2006-04-19

> BS10269.3prime
ATGGTCTAGAAAGCTTTTAAATCGATTTTGGCTTGCTCTGCCGTCGATTT
AGCAAACTTGAAAGATTGCTGAAGGGCAGCTCAAAGGCCAGCGAAAAGAG
GATGGAAGCCAGGTAGACTATGACAGCAAAGCCGCAGGTCACCACGCACA
GCATGAAAGGATCCGCATGTGTGCTCGCGTTGGTTAAACTGTAGAATAAC
GCTATGACCAGCGGATTGAGAAGGTAAATGGCGTAGGACAGTCGACTGAC
ATGTTGGAAGCCCTTGGCCTCCAGCAGGCGTGACCACCACACCCCCCGGC
CATCGCAGCTGCGCGCTATCATCCAGCATACACTAAGCGAAAAGAACAGG
CGACCCATCACAAAAAGCGTGATGGCCATCAGAGGTCCAAGATCCCGTTT
GACAGTCGAATAAATGCAGGCGAAGAAGACGAATAAGGCGAAGTGCCAGC
ATGCCCGTTCCTTTTGCTCGCTGATCTCCAACTGGACTCGATTCTCTTGC
AATAGCCAAGCCGTTACAGCTCCCAGGATATATGGAAGGACCCTTACGAA
GGGCGATGTATAGATCTCTGTTCCAGTGGCAAAGGCCGCGTCGAAGGACA
ATTGGAACTTGATGCTCAGTCCGATGCCGTAGGACCAAGCGATGGTGGCC
ACAAAAGAAGATACCACTAGAGACTTTACCACCTTGGGATATTTCACATA
GAGGAACAGCAGAGCGTTGGCCAGGATAAAGAACTGCATTTCGCAGGCCA
AGGACCAACTCCAATTGGCGCACATGTCCCGATGGTCGAAGAGGTTTTGA
ATGAACAAAAGATTGCGCCACCAGTGACGTGTACACATCTCATCGAATCG
CTCGTTGATGTGGTAAACTGAGACATCTCCNATATAGGCGTATACCAAGT
CCA

BS10269.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:45:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG11353-PA 2265 CG11353-RA 1379..2265 903..17 4416 99.8 Minus
CG11353-PB 2265 CG11353-RB 1379..2265 903..17 4416 99.8 Minus
CG30471-PA 2202 CG30471-RA 2127..2174 98..51 140 91.6 Minus
CG30471-PA 2202 CG30471-RA 1936..1962 289..263 135 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 16:37:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG11353-RB 3115 CG11353-RB 1957..2844 903..16 4429 99.9 Minus
CG11353-RA 2910 CG11353-RA 1752..2639 903..16 4429 99.9 Minus
CG30471-RB 2435 CG30471-RB 1420..1607 903..716 404 80.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 16:37:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4538251..4538794 692..149 2720 100 Minus
3L 28110227 3L 4537970..4538180 903..693 1044 99.5 Minus
3L 28110227 3L 4538866..4538999 149..16 670 100 Minus
2R 25286936 2R 15536650..15536837 903..716 404 80.9 Minus
2R 25286936 2R 15537536..15537622 137..51 210 82.8 Minus
2R 25286936 2R 15537328..15537410 289..207 190 81.9 Minus
Blast to na_te.dros performed on 2015-01-31 16:37:53 has no hits.

BS10269.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:34:45 Download gff for BS10269.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11353-PA 1380..2265 17..902 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:53:46 Download gff for BS10269.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11353-PB 1380..2265 17..902 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:38:09 Download gff for BS10269.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11353-RA 1753..2647 6..902 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:50:53 Download gff for BS10269.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11353-RA 1753..2647 6..902 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:50:53 Download gff for BS10269.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 4537971..4538180 693..902 99 -> Minus
3L 4538251..4538794 149..692 100 -> Minus
3L 4538867..4539007 6..148 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:38:09 Download gff for BS10269.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4537971..4538180 693..902 99 -> Minus
arm_3L 4538251..4538794 149..692 100 -> Minus
arm_3L 4538867..4539007 6..148 97   Minus

BS10269.5prime Sequence

945 bp (873 high quality bases) assembled on 2006-04-19

> BS10269.5prime
GAAGTTATCAGTCGACATGGAGATCAGGCGCACCTCTCGACCATATCTTT
GGTACACACCAGTGCTGATGCTGCTCGGCCTTTGGCTGGGTTCGGTTTTG
GCCAAGGGCGCTAGCAATCAGTCGGCCACTACCAACTCACACGCCTGGCA
GCGATATCACAGTCAGGCACTCAATGCGTCGCCAGCGCTGCCCGATGAAT
TGGAAATATTGGATGCCCCCTCTACGATTGAGATACATTCGCCTCATGAA
ACCCATTTGACACGCACCTCCGTCATTTTCGGACTGACCAAAGTGGCCAA
CGAGAGCAGCGTCAGCCAAAAGTGCCACGCGCAGCTGCGACAAATGCAGC
GCGGCATACTCGGCAAACAGCCATGGGCCATGAAGGTTCTGGATGCTTCG
GGAACAAAGCCCTCCGGCTTTGTATATGGTCAAAACTACTGGCTGGGAAG
TCGCGAAGCTTGTCGCGGCGTCCAAAGACCCGTGGGCATAACCCTATCAA
AGAACTTCGATCGTGTTATGCACTATGGAATTATCACCCAGCAGGCGCCC
TTCGACATGGACTATCGGGTTTTATACCTACGTCACAATTCTCCGTGGCA
AGTGGAGATTAAGCTGATGTCTGAGCAGATTATACACATTGGCCTGTGCC
TGCCAAGTGCCTGCAGTTCGGTTGAAGTTCAGAGTCTGGCCCAGGACTAT
GTGGCTGGCGGAATGTTCACTGAAAACGAGATATTCGACATAAAGCCGGA
AGTGGTTTACATGAAGGATCTGCAGCTGAAGGATGAATTCTTCGAGAGGG
CCAGCTTTCGTCTCTTGGTGGCCTGTGTTCTGCTCACTGTCACTCTGATG
TTTTGTGCTCAACAACTGCATGCGACTAGTAAAATGCCATCTATTTCTGT
GGATCCTCTGGATCGTGACTTGCCACCCGCGGAATCGGAAATATG

BS10269.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:45:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG11353-PA 2265 CG11353-RA 1..929 17..945 4620 99.8 Plus
CG11353-PB 2265 CG11353-RB 1..929 17..945 4620 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11353-RB 3115 CG11353-RB 578..1507 16..945 4635 99.9 Plus
CG11353-RA 2910 CG11353-RA 373..1302 16..945 4635 99.9 Plus
CG30471-RB 2435 CG30471-RB 285..819 245..779 560 74.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4536889..4537448 386..945 2785 99.8 Plus
3L 28110227 3L 4535993..4536363 16..386 1855 100 Plus
2R 25286936 2R 15535596..15535983 392..779 365 72.9 Plus
2R 25286936 2R 15535384..15535525 245..386 200 76.1 Plus
Blast to na_te.dros performed on 2015-02-11 14:40:02 has no hits.

BS10269.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:34:46 Download gff for BS10269.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11353-PA 1..929 17..945 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:53:48 Download gff for BS10269.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11353-PB 1..929 17..945 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:44:40 Download gff for BS10269.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11353-RA 369..1302 8..945 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:04:18 Download gff for BS10269.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11353-RA 369..1302 8..945 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:04:18 Download gff for BS10269.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4535989..4536363 8..386 98 -> Plus
3L 4536890..4537448 387..945 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:44:40 Download gff for BS10269.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4535989..4536363 8..386 98 -> Plus
arm_3L 4536890..4537448 387..945 99   Plus

BS10269.pep Sequence

Translation from 16 to 2280

> BS10269.pep
MEIRRTSRPYLWYTPVLMLLGLWLGSVLAKGASNQSATTNSHAWQRYHSQ
ALNASPALPDELEILDAPSTIEIHSPHETHLTRTSVIFGLTKVANESSVS
QKCHAQLRQMQRGILGKQPWAMKVLDASGTKPSGFVYGQNYWLGSREACR
GVQRPVGITLSKNFDRVMHYGIITQQAPFDMDYRVLYLRHNSPWQVEIKL
MSEQIIHIGLCLPSACSSVEVQSLAQDYVAGGMFTENEIFDIKPEVVYMK
DLQLKDEFFERASFRLLVACVLLTVTLMFCAQQLHATSKMPSISVDPLDR
DLAPAESEIWRGLNSLLQIERLQRYVTCWDVPGNWAKIFAIRENTANEIP
LMNGLRSVCAIWIMVFHVVWFMYFTVHNKTVLISYAEQAFFQYVSSAPLL
VDVFFTISGFLQTFNFLRNSRQLEAVRQNSFSENLKLFGKLLFHRYLRLG
PLYLVVMATVDLVYAYIGDVSVYHINERFDEMCTRHWWRNLLFIQNLFDH
RDMCANWSWSLACEMQFFILANALLFLYVKYPKVVKSLVVSSFVATIAWS
YGIGLSIKFQLSFDAAFATGTEIYTSPFVRVLPYILGAVTAWLLQENRVQ
LEISEQKERACWHFALFVFFACIYSTVKRDLGPLMAITLFVMGRLFFSLS
VCWMIARSCDGRGVWWSRLLEAKGFQHVSRLSYAIYLLNPLVIALFYSLT
NASTHADPFMLCVVTCGFAVIVYLASILFSLAFELPFSNLSSLLNRRQSK
PKSI*

BS10269.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:32:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG11353-PB 754 CG11353-PB 1..754 1..754 3952 100 Plus
CG11353-PA 754 CG11353-PA 1..754 1..754 3952 100 Plus
CG30471-PB 735 CG30471-PB 7..734 16..753 2599 65.3 Plus
CG12990-PA 663 CG12990-PA 37..657 96..751 748 29.3 Plus
CG32645-PB 853 CG32645-PB 442..850 346..750 459 26 Plus