Clone Sequence Records
BS10405.3prime Sequence
987 bp (867 high quality bases) assembled on 2006-04-19
> BS10405.3prime
ATGGTCTAGAAAGCTTTCATAATGCGGCGGAATTGGCGGCATCTGGGACT
CCGCTGGAGCTGGGGGGAAGAGCGTCGTTGGGCATGTGTGTTTCGATGTC
GACGCGACAAATGGGGCAGTGCTTGTTGGTGACTAGCCACTGATCCACGC
AATCCGTGTGAAATAGATGCATGCACGGCAGGCGGCGAACTTCGTTCTCT
ATCTCAAAGAGGTTTAAGCAAATGGCGCACTTCTCGGCATCCTCATCGGT
CTCACTGGGTCTTCGGACGCGTCGATATTTGTGAGGCAAGGTATTCCGCT
CAATAGTTTCCAAAGTAGCTCCCCGGTTTGGACGTGATGGTGCGATAAGG
ATACGGGAGCCCAGAGATAGGGGGGCCAGCCCAATCTCCAGATGCAGTGG
TGAGTAGTGGTGATGGAACATGTGGTGGTGTATGGCCCGCTGGCGCTGCA
TATGCTGCATTACTGGTGGCGATTGCTGAGCCTGCGGCTGCTGTTGGGGC
TGAAGCTGCAGATGTCGCATACTCGCTTGTGCTGCCACGCTACTATTGCC
AGAACCGGATGTAGCAGGCGACTGTTGTTGAGGAGATGGTGGAGGAGCAG
CAGCTGCCGGTGCAGCGTCGTACGGCGGATAGTAAGCGGGATCCAGGCTT
GATACGGGACCGTTCCGAGCATGAACACAACTGCAGATGCTATGCAGGTA
CCCGTTTCGCAGCGTGCTCGTTAATAGCGGAGCATTCGAAGAAAGATCGA
TAGGTGTGGGCGTCATGTGGCGACGGTGCATCTCCTGCATGCTTTGCTGG
CGGTACCACAGATTTTGATGGACCGGATACGGTGGAGCCGGCGTCAGCGA
GGTGGCCACTATGGCGCTGGGCCGGTGAGGGGGATGAATGTGGGCGTGCA
TCTGGGTCTGCGGTGCCTGGTGACCTTGATGCGGCTGCGGCTGATAGTGC
TGTCTATTGCTATACGCAGCTTCGGAACGTCAAACCT
BS10405.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:48:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6923-PA | 3771 | CG6923-RA | 2812..3771 | 976..17 | 4750 | 99.7 | Minus |
| CG6923-PB | 3771 | CG6923-RB | 2812..3771 | 976..17 | 4750 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:01:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6923-RC | 4629 | CG6923-RC | 3205..4173 | 985..17 | 4785 | 99.6 | Minus |
| CG6923-RD | 4544 | CG6923-RD | 3120..4088 | 985..17 | 4785 | 99.6 | Minus |
| CG6923-RB | 4363 | CG6923-RB | 2939..3907 | 985..17 | 4785 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:01:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11745357..11746032 | 310..985 | 3320 | 99.4 | Plus |
| 3R | 32079331 | 3R | 11744939..11745108 | 17..186 | 850 | 100 | Plus |
| 3R | 32079331 | 3R | 11745169..11745294 | 186..311 | 630 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 20:01:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6939 | 615..423 | 170 | 59.5 | Minus |
BS10405.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:38:49 Download gff for
BS10405.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-PA | 2800..3771 | 17..987 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:59:19 Download gff for
BS10405.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-PB | 2800..3771 | 17..987 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:40:57 Download gff for
BS10405.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-RB | 2936..3911 | 11..987 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:45:46 Download gff for
BS10405.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-RB | 2936..3911 | 11..987 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:45:46 Download gff for
BS10405.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11744935..11745107 | 11..185 | 98 | <- | Plus |
| 3R | 11745169..11745293 | 186..310 | 100 | <- | Plus |
| 3R | 11745358..11746035 | 311..987 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:40:57 Download gff for
BS10405.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7570657..7570829 | 11..185 | 98 | <- | Plus |
| arm_3R | 7570891..7571015 | 186..310 | 100 | <- | Plus |
| arm_3R | 7571080..7571757 | 311..987 | 99 | | Plus |
BS10405.5prime Sequence
968 bp (826 high quality bases) assembled on 2006-04-19
> BS10405.5prime
GAAGTTATCAGTCGACATGGATAGCTTGGAGAACGACCAGGAGGAGCTGC
ACCACCAGCCGAGGGTCACCTTGGCGTACGGCAGTGTGGCCACCAGTTCG
GGTGGACAGGAAAACCATTCCCAGTATGCGATGTACTATAATCAGCAGAG
GGATTCGGAGGGCTACATGCTAATGACGCCCTTCCTGTCCAGTTCGCAGA
GCCACAGCCACACCCGTTCGCCGCCCACGTACACCGCCATGGTGGAGCCA
CGTCGCGAAGAGAGTTCTGGATTTGAGGGCTTGGCCAGGCGGTGTGACAA
GTGCAGTTCGCTGGACGGACTCTGCCGCTGCGAATCGATGGTGGCCAGTA
GCAGTCGCTATGCGGACTCCACACAGAACCAGTCGCATTCGGAGGCTCAG
TTCTTGGAGCAGCCCTCATCCTCCACAGCGGCGATCGCCAATCCGCCCGC
TGTTCATTCCATTCCACGACCCAAGCGAAAGAAGACTGAACCCCTGACAA
TGGAGCCAGAGAGTGACAATGACGGCGACGCGGTGGTTGCGTCCGTCAGC
GGCACATGGCCTGCCGGTGCTATAGAAGAGCATGCTATGGACTCTACGGC
GGTCGTTTACGAGGTCCCCTCTAGTTCGCTGCAGCTCAGCAACAGCTCCT
TCGAAACCGCCCCAAGTGCCGTAAATGCTTACGATGATGTGACATCGAGT
GCCTCGGACACGGAGCACGGCCAGTTTGCTCATACGCGTACCACCAACAC
CACGACGACTACGTCTGCCGTTCAGGCTCACAAGAAGAAGGCCAGCCGCT
CCAATAATGCCTCCAACACCTCTTCCAGAGCAGTAGATACGGATGCCACG
CCAAGCACGAGTGCCCAAATCGAGAAGCGACAGATGAGTCAATTTTCTTA
TCGCAAATCAAGGGTTTTTGGAGCCGGAAAACGAGAGCAGCGATGATGGC
TGGGGATTTGCGTGTGCA
BS10405.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:48:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6923-PA | 3771 | CG6923-RA | 1..852 | 17..868 | 4260 | 100 | Plus |
| CG6923-PB | 3771 | CG6923-RB | 1..852 | 17..868 | 4260 | 100 | Plus |
| CG6923-PA | 3771 | CG6923-RA | 859..902 | 875..918 | 220 | 100 | Plus |
| CG6923-PB | 3771 | CG6923-RB | 859..902 | 875..918 | 220 | 100 | Plus |
| CG6923-PA | 3771 | CG6923-RA | 899..937 | 916..954 | 195 | 100 | Plus |
| CG6923-PB | 3771 | CG6923-RB | 899..937 | 916..954 | 195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:48:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6923-RC | 4629 | CG6923-RC | 403..1352 | 17..968 | 4665 | 99.6 | Plus |
| CG6923-RD | 4544 | CG6923-RD | 318..1267 | 17..968 | 4665 | 99.6 | Plus |
| CG6923-RB | 4363 | CG6923-RB | 137..1086 | 17..968 | 4665 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:48:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11747885..11748734 | 968..117 | 4070 | 99.1 | Minus |
| 3R | 32079331 | 3R | 11748790..11748889 | 116..17 | 500 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 23:48:30 has no hits.
BS10405.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:38:50 Download gff for
BS10405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-PA | 1..949 | 17..967 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:59:20 Download gff for
BS10405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-PB | 1..949 | 17..967 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:28:10 Download gff for
BS10405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-RB | 134..1085 | 14..967 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:10:30 Download gff for
BS10405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-RB | 134..1085 | 14..967 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:10:30 Download gff for
BS10405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11747886..11748734 | 117..967 | 99 | <- | Minus |
| 3R | 11748790..11748892 | 14..116 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:28:10 Download gff for
BS10405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7573608..7574456 | 117..967 | 99 | <- | Minus |
| arm_3R | 7574512..7574614 | 14..116 | 99 | | Minus |
BS10405.complete Sequence
3803 bp assembled on 2007-11-30
GenBank Submission: FJ636641
> BS10405.complete
GAAGTTATCAGTCGACATGGATAGCTTGGAGAACGACCAGGAGGAGCTGC
ACCACCAGCCGAGGGTCACCTTGGCGTACGGCAGTGTGGCCACCAGTTCG
GGTGGACAGGAAAACCATTCCCAGTATGCGATGTACTATAATCAGCAGAG
GGATTCGGAGGGCTACATGCTAATGACGCCCTTCCTGTCCAGTTCGCAGA
GCCACAGCCACACCCGTTCGCCGCCCACGTACACCGCCATGGTGGAGCCA
CGTCGCGAAGAGAGTTCTGGATTTGAGGGCTTGGCCAGGCGGTGTGACAA
GTGCAGTTCGCTGGACGGACTCTGCCGCTGCGAATCGATGGTGGCCAGTA
GCAGTCGCTATGCGGACTCCACACAGAACCAGTCGCATTCGGAGGCTCAG
TTCTTGGAGCAGCCCTCATCCTCCACAGCGGCGATCGCCAATCCGCCCGC
TGTTCATTCCATTCCACGACCCAAGCGAAAGAAGACTGAACCCCTGACAA
TGGAGCCAGAGAGTGACAATGACGGCGACGCGGTGGTTGCGTCCGTCAGC
GGCACATGGCCTGCCGGTGCTATAGAAGAGCATGCTATGGACTCTACGGC
GGTCGTTTACGAGGTCCCCTCTAGTTCGCTGCAGCTCAGCAACAGCTCCT
TCGAAACCGCCCCAAGTGCCGTAAATGCTTACGATGATGTGACATCGAGT
GCCTCGGACACGGAGCACGGCCAGTTTGCTCATACGCGTACCACCAACAC
CACGACGACTACGTCTGCCGTTCAGGCTCACAAGAAGAAGGCCAGCCGCT
CCAATAATGCCTCCAACACCTCTTCCAGAGCAGTAGATACGGATGCCACG
CCAAGCACGAGTGCCCAATCGAGAAAGCGACAGATGAGTCAATTTTCTTA
TCGCAAATCAAGGGTTTTGGAGCCGGAAAACGAGAGCAGCGATGATGGCT
GGGATTTGCGTGTGCATAATCCCGTTCCACCAATTGAGCCCACAGTAACG
ATTATCCGTGGTAGCAGGGGGTCCGACGAGGCCGAGATAGGTCATACGGA
TCACAACTACTATAATAGTCGGTGCGCTGTGGCGGGAGCTCCACCGGATA
GTACCTACATTAGGTCAGCCTCCTGCTCCACGGCCACCCATACTACACGT
AGCGTGGATTATGGATCTCGCATTGGTCGAAGGTCGGCTGCAACAGGATC
ACCGTCCACAAGCTCGGATCAAGAACAGGAGCAGCAACAGCGCCAACAAC
AGGAGGAGATTATTCACGAAGAACGGCGTCATCAGCAGTCACCAGGCCAA
CCCATGCACAGTATGTACGGTGTTCCCGGCGAGTCTAGAATGTCATGGAG
TCGTGCGCGGCCCTCTGACGACTCAGTGCCGCCTAGGAAACATGCGCGCA
TGGAACTGCCCGGAAGATCGCGTTCCAAACTGTCCTCAACGAATTTTAAT
TCGTTCTATCCTGGAAGGAGAGGACACCGAACCTTTGCGGAGCAAGGGAA
CAGTTCTGGGCAACATCATGTGCGGTTTCCACCATCCTCGACGCCGAATT
CGAACGGGCCCTGTGTGATTACGTACGTCGGCCGGCCAAGAGATAGTCAG
CCCGCCGCGGATCTCAATCTTCCGTCCACATCCACGGGAAGACGTGGCAG
CCATGAGACCCGCGCCGATTCCGTAGTCTTGACGGCACCAGACTTGCAGC
TGGATGATTGGTCATCGGACGATGATGATGATGACGTAGTATTTGTGCAC
TCCACTCGTGAGCCCATACTCTCAATCGATTTGACATCCGACGACGATGG
CTTGGCCAATGATACGCAACTGCAGAGGGATAGGGATAGGGGCCGTGAAA
GAGAACGGGAGCGAGCAAGGGATCGGGAACCATATCGTAATGACACTCAA
CCCAACCCGGAGGATCCAAATGAGGATAGGAGGACCATGTATGACTGTGC
TTACACATTCCCCTATGCTCGCAGGACAGATCGTCGTACAGAAGCGAATA
ATGAGGGCACCTCTGCATTCGCATTTTATAGTGGCGCTCTAGCTGATCGG
GCTGCCATTTCGGACCACAATTACAGCTACGAGCTAGACCAGCTGATGGA
TCCCGGCCCCGGTAATTTTTACCCGCCCCGCTGCTCCAACATGGATCCAC
AGCGCTACTTCCTTCCGATAAACGAATCCTCGATGTGGATGCCAGGCCAT
CCCGCTCCCCCGCCACCTCCGCCCCCGATGCCCCCAATTTTGCTGCCTGA
CAACTCTTCCACTGAGGCATACTTACGTCATCAGCAAAGAAATCTTACAT
CCACTCCAAGCAGCTCGTCCAGCGAGCAGACATCAACGCAGCAATCCCGC
CACAGGCGAAGTAGCCCGGCGAACGTGTATCATCGTTACCATCCGTACTA
TTATGCGATAACAACGCTGCCAACTGTGGTGGAGTCGGACTACCCGCCGA
GTCTCCAGCCTCACCCTCACCCTCATCCTCATTTTCAGCCCAGTCAAGGC
GGAAGCAGTCGCAGTTCTTTGAGTGGAGCTTTGAATGCGGCTGCAGTGGC
AGCCACAGCGGCGGCGGTACAGGCACAAACTTTTAGTGATTTGCTATCAC
AGGCCCATAATGAGGGACGTGCTGCGGCCCTGGAAGGCAACCGGACACCT
CCACATACAATGGTGCATGCGCAACACCAGCAGCGGCAATCCATTAATCC
GCCAGCGCCAGGAGTGGCATCAAATGCAAACCTGGCGGCAGCTGTTTCTC
CACCACCGCCGCTTGAAATGTATTCCGGACGGAGCACCATTCCGCACTGC
GGATCTCCGCCGTTCAGTGTTCGACGCTCCGAAGCTGCGTATAGCAATAG
ACAGCACTATCAGCCGCAGCCGCATCAAGGTCACCAGGCACCGCAGAACC
AGATGCACGCCCACATTCATCCCCCTCACCGGGCCAGCGCCATAGTGGCC
ACCTCGCTGACGCCGGCTCCACCGTATCCGGTCCATCAAAATCTGTGGTA
CCGCCAGCAAAGCATGCAGGAGATGCACCGTCGCCACATGACGCCCACAC
CTATCGATCTTTCTTCGAATGCTCCGCTATTAACGAGCACGCTGCGAAAC
GGGTACCTGCATAGCATCTGCAGTTGTGTTCATGCTCGGAACGGTCCCGT
ATCAAGCCTGGATCCCGCTTACTATCCGCCGTACGACGCTGCACCGGCAG
CTGCTGCTCCTCCACCATCTCCTCAACAACAGTCGCCTGCTACATCCGGT
TCTGGCAATAGTAGCGTGGCAGCACAAGCGAGTATGCGACATCTGCAGCT
TCAGCCCCAACAGCAGCCGCAGGCTCAGCAATCGCCACCAGTAATGCAGC
ATATGCAGCGCCAGCGGGCCATACACCACCACATGTTCCATCACCACTAC
TCACCACTGCATCTGGAGATTGGGCTGGCCCCCCTATCTCTGGGCTCCCG
TATCCTTATCGCACCATCACGTCCAAACCGGGGAGCTACTTTGGAAACTA
TTGAGCGGAATACCTTGCCTCACAAATATCGACGCGTCCGAAGACCCAGT
GAGACCGATGAGGATGCCGAGAAGTGCGCCATTTGCTTAAACCTCTTTGA
GATAGAGAACGAAGTTCGCCGCCTGCCGTGCATGCATCTATTTCACACGG
ATTGCGTGGATCAGTGGCTAGTCACCAACAAGCACTGCCCCATTTGTCGC
GTCGACATCGAAACACACATGCCCAACGACGCTCTTCCCCCCAGCTCCAG
CGGAGTCCCAGATGCCGCCAATTCCGCCGCATTATGAAAGCTTTCTAGAC
CAT
BS10405.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:05:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6923-RC | 3771 | CG6923-PC | 1..3771 | 17..3787 | 18855 | 100 | Plus |
| CG6923-RD | 3798 | CG6923-PD | 1..3771 | 17..3787 | 18855 | 100 | Plus |
| CG6923-RB | 3771 | CG6923-PB | 1..3771 | 17..3787 | 18855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:05:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6923-RC | 4629 | CG6923-RC | 403..4173 | 17..3787 | 18855 | 100 | Plus |
| CG6923-RD | 4544 | CG6923-RD | 318..4088 | 17..3787 | 18855 | 100 | Plus |
| CG6923-RB | 4363 | CG6923-RB | 137..3907 | 17..3787 | 18855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:05:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11745357..11748734 | 3494..117 | 16890 | 100 | Minus |
| 3R | 32079331 | 3R | 11744939..11745108 | 3787..3618 | 850 | 100 | Minus |
| 3R | 32079331 | 3R | 11745169..11745294 | 3618..3493 | 630 | 100 | Minus |
| 3R | 32079331 | 3R | 11748790..11748889 | 116..17 | 500 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 00:05:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6872 | 1185..1301 | 174 | 64.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6939 | 3189..3381 | 170 | 59.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2390 | 1216..1295 | 154 | 67.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6844 | 1185..1294 | 149 | 60.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6747..6823 | 1218..1295 | 144 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6799 | 1216..1295 | 138 | 67.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2430 | 1191..1301 | 136 | 59.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..6840 | 1185..1257 | 133 | 66.2 | Plus |
BS10405.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:12:05 Download gff for
BS10405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-RB | 1..3771 | 17..3787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:42:29 Download gff for
BS10405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-RB | 134..3911 | 14..3793 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:45:25 Download gff for
BS10405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-RB | 137..3906 | 17..3786 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:35:13 Download gff for
BS10405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-RB | 137..3906 | 17..3786 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:14:22 Download gff for
BS10405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6923-RB | 137..3906 | 17..3786 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:14:22 Download gff for
BS10405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11748790..11748889 | 17..116 | 100 | | Minus |
| 3R | 11744940..11745107 | 3619..3786 | 100 | <- | Minus |
| 3R | 11745169..11745293 | 3494..3618 | 100 | <- | Minus |
| 3R | 11745358..11748734 | 117..3493 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:45:25 Download gff for
BS10405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7574512..7574611 | 17..116 | 100 | | Minus |
| arm_3R | 7570662..7570829 | 3619..3786 | 100 | <- | Minus |
| arm_3R | 7570891..7571015 | 3494..3618 | 100 | <- | Minus |
| arm_3R | 7571080..7574456 | 117..3493 | 100 | <- | Minus |
BS10405.pep Sequence
Translation from 16 to 3786
> BS10405.pep
MDSLENDQEELHHQPRVTLAYGSVATSSGGQENHSQYAMYYNQQRDSEGY
MLMTPFLSSSQSHSHTRSPPTYTAMVEPRREESSGFEGLARRCDKCSSLD
GLCRCESMVASSSRYADSTQNQSHSEAQFLEQPSSSTAAIANPPAVHSIP
RPKRKKTEPLTMEPESDNDGDAVVASVSGTWPAGAIEEHAMDSTAVVYEV
PSSSLQLSNSSFETAPSAVNAYDDVTSSASDTEHGQFAHTRTTNTTTTTS
AVQAHKKKASRSNNASNTSSRAVDTDATPSTSAQSRKRQMSQFSYRKSRV
LEPENESSDDGWDLRVHNPVPPIEPTVTIIRGSRGSDEAEIGHTDHNYYN
SRCAVAGAPPDSTYIRSASCSTATHTTRSVDYGSRIGRRSAATGSPSTSS
DQEQEQQQRQQQEEIIHEERRHQQSPGQPMHSMYGVPGESRMSWSRARPS
DDSVPPRKHARMELPGRSRSKLSSTNFNSFYPGRRGHRTFAEQGNSSGQH
HVRFPPSSTPNSNGPCVITYVGRPRDSQPAADLNLPSTSTGRRGSHETRA
DSVVLTAPDLQLDDWSSDDDDDDVVFVHSTREPILSIDLTSDDDGLANDT
QLQRDRDRGRERERERARDREPYRNDTQPNPEDPNEDRRTMYDCAYTFPY
ARRTDRRTEANNEGTSAFAFYSGALADRAAISDHNYSYELDQLMDPGPGN
FYPPRCSNMDPQRYFLPINESSMWMPGHPAPPPPPPPMPPILLPDNSSTE
AYLRHQQRNLTSTPSSSSSEQTSTQQSRHRRSSPANVYHRYHPYYYAITT
LPTVVESDYPPSLQPHPHPHPHFQPSQGGSSRSSLSGALNAAAVAATAAA
VQAQTFSDLLSQAHNEGRAAALEGNRTPPHTMVHAQHQQRQSINPPAPGV
ASNANLAAAVSPPPPLEMYSGRSTIPHCGSPPFSVRRSEAAYSNRQHYQP
QPHQGHQAPQNQMHAHIHPPHRASAIVATSLTPAPPYPVHQNLWYRQQSM
QEMHRRHMTPTPIDLSSNAPLLTSTLRNGYLHSICSCVHARNGPVSSLDP
AYYPPYDAAPAAAAPPPSPQQQSPATSGSGNSSVAAQASMRHLQLQPQQQ
PQAQQSPPVMQHMQRQRAIHHHMFHHHYSPLHLEIGLAPLSLGSRILIAP
SRPNRGATLETIERNTLPHKYRRVRRPSETDEDAEKCAICLNLFEIENEV
RRLPCMHLFHTDCVDQWLVTNKHCPICRVDIETHMPNDALPPSSSGVPDA
ANSAAL*
BS10405.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:22:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6923-PC | 1256 | CG6923-PC | 1..1256 | 1..1256 | 6700 | 100 | Plus |
| CG6923-PD | 1265 | CG6923-PD | 1..1256 | 1..1256 | 6700 | 100 | Plus |
| CG6923-PB | 1256 | CG6923-PB | 1..1256 | 1..1256 | 6700 | 100 | Plus |
| CG6923-PA | 1256 | CG6923-PA | 1..1256 | 1..1256 | 6700 | 100 | Plus |
