Clone BS10431 Report

Search the DGRC for BS10431

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:104
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptSrc64B-RC
Protein status:BS10431.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS10431.3prime Sequence

923 bp (776 high quality bases) assembled on 2006-04-19

> BS10431.3prime
ATGGTCTAGAAAGCTTTTAGTCTTGCACCTCTCGATACGGCACCTCCGAC
GTGACCGAGAAGGACTCGAAGTAGTGGTTCAAGAACTCGAATGTCGGCCG
CTTCTCGGGCACAGCATCCCAGCACTGGAGCAGCAGCTGATAAATGTTGT
CCGGGAAGTAGTGATTCGTTGGCTTCGGCATGCGGAAACCGCGCTCGATG
TTCTCAATCACCTCGCGACTATGCATGCCCGGATAGGGCACTTGTCCGTA
CGTGAACAGCTCCATCAGCAGAATGCCATAGGACCACACGTCCGACTTGA
TCGAGAACTTGCCGTAGATGATCGCCTCGGGCGCCGTCCACTTGACCGGA
AACCGGGATCCCTGCTTGGGGCAGTACTCGTCATCCGCGATGACACGCGC
CAGTCCAAAATCACAAATCTTCGCCACATTATTCTCTCCGATCAGCACAT
TACGGGCCGCCAGATCGCGATGGATGAGCTGCTTGGACTCTAGATACTCC
ATACCGCTGGCCACCTGGGTGGCTATGTAGATGAGATCTTCGAAGTGCAA
GTAGCGGCCATCGCCCTCGCGCAAGAAGTCCAGCAGACTGCCCTTGGACA
TGTACTCCTGCACGATGTAAATGGGCTCCTCCTGCGAGCAAACGGCATAG
AGGGCCACCAGGCGGTTGTGTCGGAACTTCTTCATAATCGCGGCCTCCTG
AAGGAAAGCAGCCGTGGACATGGTGCCTTCGCGCAGCGTTTTGACCGCCA
CATCGATGCTGTTGCGCCATTTGCCGTAGAAGACCTCGCCAAAGTTGCCG
CGTCCCAGTTTGCGCAGCAGCTGAATCTCCGAGCGCGGAATCTCGTACTT
ATCGCGCAGCTCCGGACCCAAGTCCCACATCTGGGGCTGCGGTTTGGGGC
AGGGACGCGAACATATGTGACAC

BS10431.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:48:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG7524-PE 1659 Src64B-RE 753..1659 923..17 4485 99.7 Minus
CG7524-PF 1659 Src64B-RF 753..1659 923..17 4485 99.7 Minus
CG7524-PC 1659 Src64B-RC 753..1659 923..17 4485 99.7 Minus
CG7524-PD 1659 Src64B-RD 753..1659 923..17 4485 99.7 Minus
CG7524-PB 1659 Src64B-RB 753..1659 923..17 4485 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:35:43
Subject Length Description Subject Range Query Range Score Percent Strand
Src64B-RD 2815 CG7524-RD 1784..2691 923..16 4510 99.8 Minus
Src64B-RC 2567 CG7524-RC 1536..2443 923..16 4510 99.8 Minus
Src64B-RI 4338 CG7524-RI 1686..2593 923..16 4510 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:35:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4594640..4595263 16..639 3105 99.8 Plus
3L 28110227 3L 4595316..4595608 631..923 1435 99.3 Plus
Blast to na_te.dros performed on 2015-02-12 04:35:40 has no hits.

BS10431.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:39:46 Download gff for BS10431.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7524-PC 753..1659 17..923 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:00:27 Download gff for BS10431.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7524-PB 753..1659 17..923 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:27:19 Download gff for BS10431.3prime
Subject Subject Range Query Range Percent Splice Strand
Src64B-RI 1686..2593 16..923 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:03:37 Download gff for BS10431.3prime
Subject Subject Range Query Range Percent Splice Strand
Src64B-RI 1686..2593 16..923 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:03:37 Download gff for BS10431.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 4594640..4595255 16..631 100 <- Plus
3L 4595317..4595608 632..923 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:27:19 Download gff for BS10431.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4594640..4595255 16..631 100 <- Plus
arm_3L 4595317..4595608 632..923 99   Plus

BS10431.5prime Sequence

861 bp (838 high quality bases) assembled on 2006-04-19

> BS10431.5prime
GAAGTTATCAGTCGACATGGGCAACAAATGCTGCAGCAAGCGACAGGATC
AGGAACTGGCACTGGCCTATCCCACTGGGGGCTACAAGAAATCCGACTAC
ACCTTTGGCCAGACGCACATCAACAGCAGCGGCGGCGGCAACATGGGCGG
CGTTCTTGGCCAGAAGCATAACAACGGTGGCTCGCTGGACTCGCGCTACA
CGCCCGATCCCAATCATCGGGGTCCGTTGAAAATCGGCGGAAAGGGCGGC
GTTGACATCATCAGACCACGCACCACACCAACCGGTGTTCCTGGTGTCGT
GCTCAAGCGCGTTGTCGTGGCCCTGTACGACTATAAATCCCGCGATGAAT
CCGATCTGAGCTTCATGAAGGGTGACCGCATGGAGGTCATCGACGACACC
GAGTCCGATTGGTGGCGCGTCGTGAACCTAACCACCCGGCAGGAGGGCCT
CATCCCGCTCAATTTCGTGGCGGAGGAGCGCAGCGTGAACAGCGAAGACT
GGTTCTTTGAGAATGTGCTACGAAAGGAGGCGGACAAGTTGCTGCTGGCC
GAGGAGAATCCGCGTGGCACTTTCCTCGTGCGACCTTCAGAGCACAATCC
CAATGGCTACTCGCTGTCGGTGAAGGATTGGGAGGATGGACGTGGATACC
ATGTGAAGCACTACCGTATCAAGCCACTGGATAATGGCGGCTACTACATA
GCCACCAATCAGACTTTCCCCTCGCTTCAGGCCTTGGTCATGGCATACAG
CAAAAACGCTCTTGGCCTGTGTCACATATTGTCGCGTCCCTGCCCCAAAC
CGCAGCCCCAGATGTGGGACTTGGGTCCGGAGCTGCGCGATAAGTACGAG
ATTCCGCGCTC

BS10431.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:48:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG7524-PE 1659 Src64B-RE 1..845 17..861 4225 100 Plus
CG7524-PF 1659 Src64B-RF 1..845 17..861 4225 100 Plus
CG7524-PC 1659 Src64B-RC 1..845 17..861 4225 100 Plus
CG7524-PD 1659 Src64B-RD 1..845 17..861 4225 100 Plus
CG7524-PB 1659 Src64B-RB 1..845 17..861 4225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:40:05
Subject Length Description Subject Range Query Range Score Percent Strand
Src64B-RD 2815 CG7524-RD 1031..1876 16..861 4230 100 Plus
Src64B-RC 2567 CG7524-RC 783..1628 16..861 4230 100 Plus
Src64B-RI 4338 CG7524-RI 933..1778 16..861 4230 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4598154..4598419 281..16 1330 100 Minus
3L 28110227 3L 4595692..4595945 752..499 1270 100 Minus
3L 28110227 3L 4596064..4596284 498..278 1090 99.5 Minus
3L 28110227 3L 4595516..4595624 861..753 545 100 Minus
Blast to na_te.dros performed on 2015-02-12 06:40:02 has no hits.

BS10431.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:39:48 Download gff for BS10431.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7524-PC 1..845 17..861 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:00:28 Download gff for BS10431.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7524-PB 1..845 17..861 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 13:40:22 Download gff for BS10431.5prime
Subject Subject Range Query Range Percent Splice Strand
Src64B-RI 930..1778 10..861 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:06:51 Download gff for BS10431.5prime
Subject Subject Range Query Range Percent Splice Strand
Src64B-RI 930..1778 10..861 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:06:51 Download gff for BS10431.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4595516..4595624 753..861 100 <- Minus
3L 4595692..4595945 499..752 100 <- Minus
3L 4596064..4596280 282..498 100 <- Minus
3L 4598154..4598422 10..281 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 13:40:22 Download gff for BS10431.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4595516..4595624 753..861 100 <- Minus
arm_3L 4595692..4595945 499..752 100 <- Minus
arm_3L 4596064..4596280 282..498 100 <- Minus
arm_3L 4598154..4598422 10..281 98   Minus

BS10431.complete Sequence

1691 bp assembled on 2007-07-13

GenBank Submission: FJ636658

> BS10431.complete
GAAGTTATCAGTCGACATGGGCAACAAATGCTGCAGCAAGCGACAGGATC
AGGAACTGGCACTGGCCTATCCCACTGGGGGCTACAAGAAATCCGACTAC
ACCTTTGGCCAGACGCACATCAACAGCAGCGGCGGCGGCAACATGGGCGG
CGTTCTTGGCCAGAAGCATAACAACGGTGGCTCGCTGGACTCGCGCTACA
CGCCCGATCCCAATCATCGGGGTCCGTTGAAAATCGGCGGAAAGGGCGGC
GTTGACATCATCAGACCACGCACCACACCAACCGGTGTTCCTGGTGTCGT
GCTCAAGCGCGTTGTCGTGGCCCTGTACGACTATAAATCCCGCGATGAAT
CCGATCTGAGCTTCATGAAGGGTGACCGCATGGAGGTCATCGACGACACC
GAGTCCGATTGGTGGCGCGTCGTGAACCTAACCACCCGGCAGGAGGGCCT
CATCCCGCTCAATTTCGTGGCGGAGGAGCGCAGCGTGAACAGCGAAGACT
GGTTCTTTGAGAATGTGCTACGAAAGGAGGCGGACAAGTTGCTGCTGGCC
GAGGAGAATCCGCGTGGCACTTTCCTCGTGCGACCTTCAGAGCACAATCC
CAATGGCTACTCGCTGTCGGTGAAGGATTGGGAGGATGGACGTGGATACC
ATGTGAAGCACTACCGTATCAAGCCACTGGATAATGGCGGCTACTACATA
GCCACCAATCAGACTTTCCCCTCGCTTCAGGCCTTGGTCATGGCATACAG
CAAAAACGCTCTTGGCCTGTGTCACATATTGTCGCGTCCCTGCCCCAAAC
CGCAGCCCCAGATGTGGGACTTGGGTCCGGAGCTGCGCGATAAGTACGAG
ATTCCGCGCTCGGAGATTCAGCTGCTGCGCAAACTGGGACGCGGCAACTT
TGGCGAGGTCTTCTACGGCAAATGGCGCAACAGCATCGATGTGGCGGTCA
AAACGCTGCGCGAAGGCACCATGTCCACGGCTGCTTTCCTTCAGGAGGCC
GCGATTATGAAGAAGTTCCGACACAACCGCCTGGTGGCCCTCTATGCCGT
TTGCTCGCAGGAGGAGCCCATTTACATCGTGCAGGAGTACATGTCCAAGG
GCAGTCTGCTGGACTTCTTGCGCGAGGGCGATGGCCGCTACTTGCACTTC
GAAGATCTCATCTACATAGCCACCCAGGTGGCCAGCGGTATGGAGTATCT
AGAGTCCAAGCAGCTCATCCATCGCGATCTGGCGGCCCGTAATGTGCTGA
TCGGAGAGAATAATGTGGCGAAGATTTGTGATTTTGGACTGGCGCGTGTC
ATCGCGGATGACGAGTACTGCCCCAAGCAGGGATCCCGGTTTCCGGTCAA
GTGGACGGCGCCCGAGGCGATCATCTACGGCAAGTTCTCGATCAAGTCGG
ACGTGTGGTCCTATGGCATTCTGCTGATGGAGCTGTTCACGTACGGACAA
GTGCCCTATCCGGGCATGCATAGTCGCGAGGTGATTGAGAACATCGAGCG
CGGTTTCCGCATGCCGAAGCCAACGAATCACTACTTCCCGGACAACATTT
ATCAGCTGCTGCTCCAGTGCTGGGATGCTGTGCCCGAGAAGCGGCCGACA
TTCGAGTTCTTGAACCACTACTTCGAGTCCTTCTCGGTCACGTCGGAGGT
GCCGTATCGAGAGGTGCAAGACTAAAAGCTTTCTAGACCAT

BS10431.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:36:37
Subject Length Description Subject Range Query Range Score Percent Strand
Src64B-RD 1659 CG7524-PD 1..1659 17..1675 8295 100 Plus
Src64B-RC 1659 CG7524-PC 1..1659 17..1675 8295 100 Plus
Src64B-RI 1659 CG7524-PI 1..1659 17..1675 8295 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:36:38
Subject Length Description Subject Range Query Range Score Percent Strand
Src64B-RD 2815 CG7524-RD 1031..2691 16..1676 8305 100 Plus
Src64B-RC 2567 CG7524-RC 783..2443 16..1676 8305 100 Plus
Src64B-RI 4338 CG7524-RI 933..2593 16..1676 8305 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:36:35
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4594640..4595263 1676..1053 3105 99.8 Minus
3L 28110227 3L 4595316..4595624 1061..753 1545 100 Minus
3L 28110227 3L 4598154..4598419 281..16 1330 100 Minus
3L 28110227 3L 4595692..4595945 752..499 1270 100 Minus
3L 28110227 3L 4596064..4596284 498..278 1090 99.5 Minus
Blast to na_te.dros performed on 2014-11-27 16:36:36 has no hits.

BS10431.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:25:40 Download gff for BS10431.complete
Subject Subject Range Query Range Percent Splice Strand
Src64B-RC 1..1659 17..1675 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:57:07 Download gff for BS10431.complete
Subject Subject Range Query Range Percent Splice Strand
Src64B-RC 844..2507 10..1676 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:35 Download gff for BS10431.complete
Subject Subject Range Query Range Percent Splice Strand
Src64B-RI 934..2590 17..1673 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:25:40 Download gff for BS10431.complete
Subject Subject Range Query Range Percent Splice Strand
Src64B-RC 844..2507 10..1676 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:22:29 Download gff for BS10431.complete
Subject Subject Range Query Range Percent Splice Strand
Src64B-RI 934..2590 17..1673 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:22:29 Download gff for BS10431.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4595692..4595945 499..752 100 <- Minus
3L 4596064..4596280 282..498 100 <- Minus
3L 4598154..4598418 17..281 100   Minus
3L 4594643..4595255 1061..1673 100 <- Minus
3L 4595317..4595624 753..1060 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:35 Download gff for BS10431.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4594643..4595255 1061..1673 100 <- Minus
arm_3L 4595317..4595624 753..1060 100 <- Minus
arm_3L 4595692..4595945 499..752 100 <- Minus
arm_3L 4596064..4596280 282..498 100 <- Minus
arm_3L 4598154..4598418 17..281 100   Minus

BS10431.pep Sequence

Translation from 16 to 1674

> BS10431.pep
MGNKCCSKRQDQELALAYPTGGYKKSDYTFGQTHINSSGGGNMGGVLGQK
HNNGGSLDSRYTPDPNHRGPLKIGGKGGVDIIRPRTTPTGVPGVVLKRVV
VALYDYKSRDESDLSFMKGDRMEVIDDTESDWWRVVNLTTRQEGLIPLNF
VAEERSVNSEDWFFENVLRKEADKLLLAEENPRGTFLVRPSEHNPNGYSL
SVKDWEDGRGYHVKHYRIKPLDNGGYYIATNQTFPSLQALVMAYSKNALG
LCHILSRPCPKPQPQMWDLGPELRDKYEIPRSEIQLLRKLGRGNFGEVFY
GKWRNSIDVAVKTLREGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEE
PIYIVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQL
IHRDLAARNVLIGENNVAKICDFGLARVIADDEYCPKQGSRFPVKWTAPE
AIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMP
KPTNHYFPDNIYQLLLQCWDAVPEKRPTFEFLNHYFESFSVTSEVPYREV
QD*

BS10431.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:13:24
Subject Length Description Subject Range Query Range Score Percent Strand
Src64B-PD 552 CG7524-PD 1..552 1..552 2957 100 Plus
Src64B-PC 552 CG7524-PC 1..552 1..552 2957 100 Plus
Src64B-PI 552 CG7524-PI 1..552 1..552 2957 100 Plus
Src64B-PH 552 CG7524-PH 1..552 1..552 2957 100 Plus
Src64B-PF 552 CG7524-PF 1..552 1..552 2957 100 Plus