Clone BS10432 Report

Search the DGRC for BS10432

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:104
Well:32
Vector:pDNR-Dual
Associated Gene/Transcriptobsolete transcript model
Protein status:BS10432.pep: validated full length
Sequenced Size:16

Clone Sequence Records

BS10432.3prime Sequence

893 bp (761 high quality bases) assembled on 2006-04-19

> BS10432.3prime
ATGGTCTAGAAAGCTTCTAAGAATAAGGCCACGTCTCCGATTTGGCAGCG
GCCGCACTGGAAAGCTTCTGCAGCGGCTCCTGCTCTTCAACATTGTTGGT
TGTCGTTTCGGTTACATCAGTAAACGCTATCTTGTAGACATCCTCGTAGG
TGGTGGCAAAGTGAACCTCCAGACCATCTGTAATGTACGTGGGCAACTCC
TCGAAGTCTTTCTTGTTATCCACAGGCAGAATAAGACAATTCACTCCACT
ACGACGTGCTGCAATCGTCTTTTCCTTAATACCACCCACGGGTAGCACTT
TTCCCTTCAGGGATACTTCGCCCGTCATAGCGATATCTTGGCGCACCGGC
TTTCCAGTGGCCAACGATACGAGAGCTGTAATAATGGTGATGCCCGCACT
GGGGCCATCTTTCGGTGTGGCACCTTCAGGAACATGGAGGTGAATGTGCT
CTTGCTCTAAGAACAGATTATTGGGTTCCAGCGAATATAAAAAGTTGCGC
GCCACCGTTAAGGCTATTTGGGCCGACTCCTTCATGACATCTCCCAAATT
TCCGGTGATGTGCAGCGATCCGGCGACAGTGTTCGGATCTGTTTTTGCCC
CCTGGCGAATGTGACGCCTTGAGGTTTCGATGTAAAGCGATGAACCACCC
ATGGCGGTCCAGGCCAGACCCATGACTACACCCACCGGTGTGGTTGCGTA
CATGCGATCTGAGCTAAAGATTTGTTTGCCCAGGAATGTGGTCAGATTAT
CAGCGTTAACCGGAAAGTGCTCGCCTTCTTTTTTGACCACTCGGAAGGCC
ACCTTGCGAATAACTTTCTCGATATGCTTTTGCAGGTTTCGCACCCCGGA
TTCCCGGCAATAACTGCGAATCAGCATGTTTAGGGCATCCTCG

BS10432.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:48:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG8798-PA 3021 CG8798-RA 2145..3021 893..17 4385 100 Minus
CG8798-PB 2499 CG8798-RB 1623..2499 893..17 4385 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 17:22:29
Subject Length Description Subject Range Query Range Score Percent Strand
Lon-RC 3761 CG8798-RC 2316..3193 893..16 4390 100 Minus
Lon-RA 3707 CG8798-RA 2262..3139 893..16 4390 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 17:22:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19608980..19609424 449..893 2225 100 Plus
3L 28110227 3L 19608425..19608668 16..259 1220 100 Plus
3L 28110227 3L 19608731..19608921 259..449 955 100 Plus
Blast to na_te.dros performed on 2015-02-06 17:22:24 has no hits.

BS10432.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:39:49 Download gff for BS10432.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8798-PA 2145..3021 17..893 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:00:30 Download gff for BS10432.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8798-PB 1623..2499 17..893 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:31:44 Download gff for BS10432.3prime
Subject Subject Range Query Range Percent Splice Strand
Lon-RA 2262..3142 10..893 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:29:33 Download gff for BS10432.3prime
Subject Subject Range Query Range Percent Splice Strand
Lon-RA 2262..3142 10..893 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:29:33 Download gff for BS10432.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 19608422..19608668 10..259 98 <- Plus
3L 19608732..19608921 260..449 100 <- Plus
3L 19608981..19609424 450..893 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:31:44 Download gff for BS10432.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19601522..19601768 10..259 98 <- Plus
arm_3L 19601832..19602021 260..449 100 <- Plus
arm_3L 19602081..19602524 450..893 100   Plus

BS10432.5prime Sequence

838 bp (771 high quality bases) assembled on 2006-04-19

> BS10432.5prime
GAAGTTATCAGTCGACATGGTTGTGGTGGCCCATCGTCGTATTCGTATAA
CAGGTCAGGTGGTAGAGGACGTGCCACCTCCTAAGCCCGCTGAAGATCAA
AGCACTGATCAAGCGGATGCGGCACCTATAAAATCAAGATCCGACCCAGC
CCGAAAGCCCCGTGGCCGAATTCCCAGGAGTCGGACCGGAAAATCACGTG
AATCGGCGGCTGCTGAAGAACTTATACAAAACCAGACTCTGGAGCCGCCA
CTGAAATCAGGCAAAGTCGAGTCATCGAGCTTGCCAAAGCCTCCAACAGA
AGAAAAGATAGTGGAACCTGAGACTGGTGCCAAAGAAAATGTTAATCAAT
CTGCGCCCAGCGCCCAACCTGTTCTTATTGTTGAAGTGGAGAACGTAAAG
CAACCGATCTATAAACAAACGGAAGAGGTGAAGGCATTAACTCAGGAGAT
AATCAAGACTCTTCGGGACATAATCACAATGAATCCCTTGTATAGAGAGA
GTCTACAGCAGATGCTGCACCAAAATCAACGAGTTGTCGACAACCCCATT
TATCTGTGCGATTTAGGAGCATCCCTTTCCGCTGGAGAACCAGCTGAGCT
GCAAAAAATTCTTGAGGAAACAGATATCCCAGAACGTCTACAATTGGCCT
TAACTTTACTCAAAAAGGAGTTGGAACTCTCCAGGCTCCAACAAAAAATT
GGACGCGAAGTAGAGGAAAAAGTCAAGCAGCAACATCGCANATATATACT
CCAGGAACAGTTGAAAGTCATCAAAAAAGAACTGGGCATCGAAAAAGACG
ACNAGGATGCCATTGGTGAAAAGTACCGCGAAAAGCTG

BS10432.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:48:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG8798-PA 3021 CG8798-RA 522..1344 16..838 4077 99.7 Plus
CG8798-PB 2499 CG8798-RB 1..822 17..838 4072 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
Lon-RA 3707 CG8798-RA 639..1461 16..838 4093 99.8 Plus
Lon-RC 3761 CG8798-RC 766..1515 89..838 3728 99.7 Plus
Lon-RC 3761 CG8798-RC 639..712 16..89 370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:31:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19610802..19611208 495..89 2035 100 Minus
3L 28110227 3L 19610344..19610556 838..626 1043 99.1 Minus
3L 28110227 3L 19610615..19610746 625..494 660 100 Minus
3L 28110227 3L 19611325..19611398 89..16 370 100 Minus
Blast to na_te.dros performed 2015-02-11 18:31:57
Subject Length Description Subject Range Query Range Score Percent Strand
1731 4648 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). 978..1073 383..477 143 64.9 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 3722..3797 384..459 128 63.2 Plus

BS10432.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:39:50 Download gff for BS10432.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8798-PA 509..1344 4..838 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:00:31 Download gff for BS10432.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8798-PA 509..1344 4..838 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 16:35:45 Download gff for BS10432.5prime
Subject Subject Range Query Range Percent Splice Strand
Lon-RA 626..1461 4..838 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:04:02 Download gff for BS10432.5prime
Subject Subject Range Query Range Percent Splice Strand
Lon-RA 626..1461 4..838 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:04:02 Download gff for BS10432.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 19610344..19610556 626..838 99 <- Minus
3L 19610615..19610744 496..625 100 <- Minus
3L 19610802..19611207 90..495 100 <- Minus
3L 19611325..19611411 4..89 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 16:35:45 Download gff for BS10432.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19603444..19603656 626..838 99 <- Minus
arm_3L 19603715..19603844 496..625 100 <- Minus
arm_3L 19603902..19604307 90..495 100 <- Minus
arm_3L 19604425..19604511 4..89 94   Minus

BS10432.complete Sequence

2531 bp assembled on 2007-11-30

> BS10432.complete
GAAGTTATCAGTCGACATGGTTGTGGTGGCCCATCGTCGTATTCGTATAA
CAGGTCAGGTGGTAGAGGACGTGCCACCTCCTAAGCCCGCTGAAGATCAA
AGCACTGATCAAGCGGATGCGGCACCTATAAAATCAAGATCCGACCCAGC
CCGAAAGCCCCGTGGCCGAATTCCCAGGAGTCGGACCGGAAAATCACGTG
AATCGGCGGCTGCTGAAGAACTTATACAAAACCAGACTCTGGAGCCGCCA
CTGAAATCAGGCAAAGTCGAGTCATCGAGCTTGCCAAAGCCTCCAACAGA
AGAAAAGATAGTGGAACCTGAGACTGGTGCCAAAGAAAATGTTAATCAAT
CTGCGCCCAGCGCCCAACCTGTTCTTATTGTTGAAGTGGAGAACGTAAAG
CAACCGATCTATAAACAAACGGAAGAGGTGAAGGCATTAACTCAGGAGAT
AATCAAGACTCTTCGGGACATAATCACAATGAATCCCTTGTATAGAGAGA
GTCTACAGCAGATGCTGCACCAAAATCAACGAGTTGTCGACAACCCCATT
TATCTGTGCGATTTAGGAGCATCCCTTTCCGCTGGAGAACCAGCTGAGCT
GCAAAAAATTCTTGAGGAAACAGATATCCCAGAACGTCTACAATTGGCCT
TAACTTTACTCAAAAAGGAGTTGGAACTCTCCAGGCTCCAACAAAAAATT
GGACGCGAAGTAGAGGAAAAAGTCAAGCAGCAACATCGCAAATATATACT
CCAGGAACAGTTGAAAGTCATCAAAAAAGAACTGGGCATCGAAAAAGACG
ACAAGGATGCCATTGGTGAAAAGTACCGCGAAAAGCTGAAGGATAAGGTG
GTTCCCGAAGCTATTATGACGGTTATTGATGAAGAACTCACCAAGCTGAA
CTTCCTGGAGAGTCATAGTTCCGAGTTTAATGTAACTCGCAATTACCTCG
ACTGGCTTACTTCCCTACCTTGGGGCGTTATCAGCACCGAAAATCTCTGC
CTGGAGAAGGCCACTGAAACACTAAACGACGATCACTACGGAATGGAGGA
TATCAAGAAGCGTATTTTAGAATTTATTGCCGTCAGTTCCCTCAAGGGCT
CTACGCAGGGCAAGATCTTGTGCTTTCATGGACCCCCTGGTGTGGGCAAG
ACAAGCATAGCAAAGTCCATTGCACGCGCTTTGAATCGCGAGTACTTCCG
CTTTAGTGTGGGCGGCATGACAGACGTTGCTGAGATCAAGGGACATCGCC
GCACCTATGTGGGCGCAATGCCGGGTAAACTGATTCAGTGCCTGAAGAAG
ACTAAGATTGAAAATCCTCTGGTACTCATCGACGAGGTGGACAAGATCGG
CAAGGGCTACCAGGGAGATCCTAGCTCAGCATTGTTAGAGCTACTAGATC
CCGAGCAGAATGCGAATTTCCTGGACCACTACCTCGATGTGCCGGTAGAC
CTCTCGCGAGTGCTCTTCATCTGCACAGCTAATGTGATCGACACTATTCC
CGAGCCTTTAAGAGATCGCATGGAATTGATTGAGATGTCTGGGTATGTTG
CCGAAGAGAAGATCGCCATCGCTCGTCAGTATCTGATGCCACAAGCGATG
AAGGACTGTGGATTAACGGACAAGCATATCAACATTTCCGAGGATGCCCT
AAACATGCTGATTCGCAGTTATTGCCGGGAATCCGGGGTGCGAAACCTGC
AAAAGCATATCGAGAAAGTTATTCGCAAGGTGGCCTTCCGAGTGGTCAAA
AAAGAAGGCGAGCACTTTCCGGTTAACGCTGATAATCTGACCACATTCCT
GGGCAAACAAATCTTTAGCTCAGATCGCATGTACGCAACCACACCGGTGG
GTGTAGTCATGGGTCTGGCCTGGACCGCCATGGGTGGTTCATCGCTTTAC
ATCGAAACCTCAAGGCGTCACATTCGCCAGGGGGCAAAAACAGATCCGAA
CACTGTCGCCGGATCGCTGCACATCACCGGAAATTTGGGAGATGTCATGA
AGGAGTCGGCCCAAATAGCCTTAACGGTGGCGCGCAACTTTTTATATTCG
CTGGAACCCAATAATCTGTTCTTAGAGCAAGAGCACATTCACCTCCATGT
TCCTGAAGGTGCCACACCGAAAGATGGCCCCAGTGCGGGCATCACCATTA
TTACAGCTCTCGTATCGTTGGCCACTGGAAAGCCGGTGCGCCAAGATATC
GCTATGACGGGCGAAGTATCCCTGAAGGGAAAAGTGCTACCCGTGGGTGG
TATTAAGGAAAAGACGATTGCAGCACGTCGTAGTGGAGTGAATTGTCTTA
TTCTGCCTGTGGATAACAAGAAAGACTTCGAGGAGTTGCCCACGTACATT
ACAGATGGTCTGGAGGTTCACTTTGCCACCACCTACGAGGATGTCTACAA
GATAGCGTTTACTGATGTAACCGAAACGACAACCAACAATGTTGAAGAGC
AGGAGCCGCTGCAGAAGCTTTCCAGTGCGGCCGCTGCCAAATCGGAGACG
TGGCCTTATTCTTAGAAGCTTTCTAGACCAT

BS10432.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:56:03
Subject Length Description Subject Range Query Range Score Percent Strand
Lon-RA 3021 CG8798-PA 522..3021 16..2515 12500 100 Plus
Lon-RC 3075 CG8798-PC 649..3075 89..2515 12135 100 Plus
Lon-RC 3075 CG8798-PC 522..595 16..89 370 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:04
Subject Length Description Subject Range Query Range Score Percent Strand
Lon-RA 3707 CG8798-RA 639..3139 16..2516 12505 100 Plus
Lon-RC 3761 CG8798-RC 766..3193 89..2516 12140 100 Plus
Lon-RC 3761 CG8798-RC 639..712 16..89 370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19608980..19609709 2083..1354 3650 100 Minus
3L 28110227 3L 19609765..19610193 1354..926 2130 99.8 Minus
3L 28110227 3L 19610802..19611208 495..89 2035 100 Minus
3L 28110227 3L 19610252..19610556 930..626 1525 100 Minus
3L 28110227 3L 19608425..19608668 2516..2273 1220 100 Minus
3L 28110227 3L 19608731..19608921 2273..2083 955 100 Minus
3L 28110227 3L 19610615..19610746 625..494 660 100 Minus
3L 28110227 3L 19611325..19611398 89..16 370 100 Minus
Blast to na_te.dros performed 2014-11-26 16:56:02
Subject Length Description Subject Range Query Range Score Percent Strand
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 3722..3797 384..459 128 63.2 Plus

BS10432.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:12:21 Download gff for BS10432.complete
Subject Subject Range Query Range Percent Splice Strand
CG8798-RA 509..3021 4..2515 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:42:52 Download gff for BS10432.complete
Subject Subject Range Query Range Percent Splice Strand
CG8798-RA 620..3136 4..2522 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:31 Download gff for BS10432.complete
Subject Subject Range Query Range Percent Splice Strand
Lon-RA 640..3138 17..2515 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:39:15 Download gff for BS10432.complete
Subject Subject Range Query Range Percent Splice Strand
CG8798-RA 634..3132 17..2515 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:59 Download gff for BS10432.complete
Subject Subject Range Query Range Percent Splice Strand
Lon-RA 640..3138 17..2515 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:30:59 Download gff for BS10432.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19611325..19611397 17..89 100   Minus
3L 19608981..19609709 1354..2082 100 <- Minus
3L 19609766..19610188 931..1353 100 <- Minus
3L 19610252..19610556 626..930 100 <- Minus
3L 19610615..19610744 496..625 100 <- Minus
3L 19610802..19611207 90..495 100 <- Minus
3L 19608426..19608668 2273..2515 100 <- Minus
3L 19608732..19608921 2083..2272 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:31 Download gff for BS10432.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19601832..19602021 2083..2272 100 <- Minus
arm_3L 19601526..19601768 2273..2515 100 <- Minus
arm_3L 19602081..19602809 1354..2082 100 <- Minus
arm_3L 19602866..19603288 931..1353 100 <- Minus
arm_3L 19603352..19603656 626..930 100 <- Minus
arm_3L 19603715..19603844 496..625 100 <- Minus
arm_3L 19603902..19604307 90..495 100 <- Minus
arm_3L 19604425..19604497 17..89 100   Minus

BS10432.pep Sequence

Translation from 16 to 2514

> BS10432.pep
MVVVAHRRIRITGQVVEDVPPPKPAEDQSTDQADAAPIKSRSDPARKPRG
RIPRSRTGKSRESAAAEELIQNQTLEPPLKSGKVESSSLPKPPTEEKIVE
PETGAKENVNQSAPSAQPVLIVEVENVKQPIYKQTEEVKALTQEIIKTLR
DIITMNPLYRESLQQMLHQNQRVVDNPIYLCDLGASLSAGEPAELQKILE
ETDIPERLQLALTLLKKELELSRLQQKIGREVEEKVKQQHRKYILQEQLK
VIKKELGIEKDDKDAIGEKYREKLKDKVVPEAIMTVIDEELTKLNFLESH
SSEFNVTRNYLDWLTSLPWGVISTENLCLEKATETLNDDHYGMEDIKKRI
LEFIAVSSLKGSTQGKILCFHGPPGVGKTSIAKSIARALNREYFRFSVGG
MTDVAEIKGHRRTYVGAMPGKLIQCLKKTKIENPLVLIDEVDKIGKGYQG
DPSSALLELLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRD
RMELIEMSGYVAEEKIAIARQYLMPQAMKDCGLTDKHINISEDALNMLIR
SYCRESGVRNLQKHIEKVIRKVAFRVVKKEGEHFPVNADNLTTFLGKQIF
SSDRMYATTPVGVVMGLAWTAMGGSSLYIETSRRHIRQGAKTDPNTVAGS
LHITGNLGDVMKESAQIALTVARNFLYSLEPNNLFLEQEHIHLHVPEGAT
PKDGPSAGITIITALVSLATGKPVRQDIAMTGEVSLKGKVLPVGGIKEKT
IAARRSGVNCLILPVDNKKDFEELPTYITDGLEVHFATTYEDVYKIAFTD
VTETTTNNVEEQEPLQKLSSAAAAKSETWPYS*

BS10432.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:33:09
Subject Length Description Subject Range Query Range Score Percent Strand
Lon-PA 1006 CG8798-PA 175..1006 1..832 4231 100 Plus
Lon-PC 1024 CG8798-PC 175..1024 1..832 4202 97.9 Plus