Clone Sequence Records
BS10459.complete Sequence
2711 bp assembled on 2009-12-07
GenBank Submission: KX801110
> BS10459.complete
GAAGTTATCAGTCGACATGAAAAACGACGTCGTGCGATGGAGCAGGCAGC
CAACTAGCAACACCACTAACAGCAGCAGCAGCAGTAGAAGCGATAGCAAC
AGCACTCATAAGCACAGAAGCAAAAGCAACAAATTAAATGCTCGACAATT
AGGGTCAAATGCTGCCAGAAGTTGTCAGCAAAGATCCTCTGTGGCAACAA
CACTAGAAGATGAACAACAAACAATCATTGAATGTGATATAGGAAATTTC
AATTTCGATTGCAATTTATTCAAAACTAGTTTTTTAACGCAACACAAACA
GAAACGTAGTGGCAAGAGCAGCAGCAAAAGTAAGAGCAACAGAAGTAGAC
CCCTAGCGAAAACGAAAGCGGTGTTTCTATTAGCTCTGCAATTTAGTGCC
GTAGTTTTTTTATGTAATATTAATGTCGGTTTCGTGGCCGGAAGTGTGGC
AACTGCGGCATCATCGGCAGGCGGCTCATCGCCGGCAGCTCCATCATCTG
CGCCCTCATCCCCGCCCACAGTTGCTGTACCACCGCCGCCGCCACCTTCG
TCGGCACTCAAAGTGGATCCAAATGGTCAGTCACCAGTGCTGCCGCCCTA
CGTTCTCGATTATGAGACGGGGGGCAAGGCCAAGCTAACGCCAAACAATG
GCAAGTTCGGCCAATCGGGCAGTTCCGGGAGCAATAACAACCACATCGTC
GGACACTATACCCACACCTGGGCGGTGCACATACCAAACGGCGATAATGG
CATGGCCGATGCGGTTGCCAAGGATCACGGATTCGTCAATTTGGGCAAGA
TCTTCGATGATCACTACCACTTCGCACATCACAAGGTCTCGAAGCGGTCG
CTCTCCCCCGCCACGCATCACCAGACTCGCCTGGATGACGACGATCGCGT
CCACTGGGCGAAGCAGCAGCGGGCCAAGTCGCGATCCAAACGGGACTTTA
TCCGCATGCGACCCTCAAGGACCTCCTCGCGAGCCATGTCGATGGTGGAC
GCCATGTCCTTTAACGACTCCAAGTGGCCGCAGATGTGGTATCTGAATCG
TGGTGGTGGCCTGGACATGAATGTGATACCCGCCTGGAAGATGGGCATAA
CCGGCAAGGGCGTGGTGGTGACAATTCTGGATGATGGCCTGGAATCCGAT
CATCCGGACATACAGGATAACTACGATCCCAAAGCCTCGTACGATGTGAA
TAGCCACGACGACGATCCGATGCCGCATTACGATATGACGGACTCGAACC
GCCATGGAACTCGCTGTGCCGGCGAGGTGGCAGCCACCGCCAACAATTCG
TTCTGCGCGGTGGGTATTGCCTACGGCGCCAGTGTGGGCGGAGTCAGGAT
GCTGGACGGAGACGTCACGGATGCGGTTGAGGCACGGTCGCTGTCGCTGA
ATCCGCAGCACATTGACATATACAGTGCCTCCTGGGGACCCGATGACGAT
GGCAAGACGGTGGACGGACCCGGCGAACTGGCATCGCGCGCCTTTATCGA
GGGCACAACTAAGGGTCGCGGCGGCAAGGGCAGCATCTTCATATGGGCAT
CGGGCAATGGTGGGCGGGAGCAGGATAACTGCAACTGCGACGGCTACACG
AACTCCATCTGGACGCTGTCCATCTCCAGTGCCACGGAGGAGGGCCATGT
GCCCTGGTACTCGGAGAAGTGCAGCTCCACGCTGGCCACCACCTACAGCA
GCGGCGGGCAGGGCGAGAAGCAGGTGGTCACCACGGACCTGCACCACTCG
TGCACTGTCTCCCACACGGGCACCTCGGCGTCGGCCCCGCTCGCCGCTGG
CATAGCCGCCCTGGTGCTGCAGTCCAACCAGAATCTCACCTGGCGCGATC
TGCAGCACATTGTTGTGCGCACCGCCAAGCCGGCGAACCTTAAGGACCCC
AGCTGGTCACGCAATGGGGTGGGGCGGCGGGTGAGCCACTCCTTTGGCTA
CGGATTGATGGACGCCGCCGAGATGGTGCGCGTGGCCCGCAACTGGAAGG
CGGTGCCGGAGCAGCAGCGGTGCGAGATTAACGCTCCCCATGTCGACAAG
GTCATTCCACCTCGTACCCATATCACCCTGCAACTGACGGTTAATCACTG
TCGATCGGTCAATTACCTGGAGCACGTCCAGGCCAAGATTACGCTAACGT
CGCAGAGACGAGGAGACATTCAGCTCTTTTTGAGGTCTCCCGCAAACACC
AGTGTCACGCTCCTAACGCCTAGGATACATGACAACTCTCGTTCCGGATT
CAATCAATGGCCCTTCATGTCTGTGCACACCTGGGGAGAGTCGCCGCAAG
GAAACTGGCAGCTGGAGATCCACAACGAGGGTCGCTATATGGCACAAATC
ACACAATGGGATATGATATTCTACGGCACCGAAACGCCCGCCCAACCCGA
TGACGTGGCCAATCCCAGCCAGTCGAACCAGTTCAATCTGTACGGCAACG
ATATGGCCCACAATGACGTCGAGTACGATTCCACCGGCCAGTGGAGGAAT
ATGCAGCAGGTGGGCGAGGTGGGCATGACCCGAGATCACAGCAACACCGC
CGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCCTTACTCT
TTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCAACGAC
AACAACAACAAGAACAAAAACAACATTATCAAATGCATTAGATAAAAGCT
TTCTAGACCAT
BS10459.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:19:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fur1-RI | 2679 | CG10772-PI | 1..2679 | 17..2695 | 13395 | 100 | Plus |
| Fur1-RC | 2679 | CG10772-PC | 1..2679 | 17..2695 | 13395 | 100 | Plus |
| Fur1-RD | 2679 | CG10772-PD | 1..2679 | 17..2695 | 13395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:19:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fur1-RI | 6225 | CG10772-RI | 738..3416 | 17..2695 | 13395 | 100 | Plus |
| Fur1-RC | 3912 | CG10772-RC | 738..3416 | 17..2695 | 13395 | 100 | Plus |
| Fur1-RD | 3847 | CG10772-RD | 673..3351 | 17..2695 | 13395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:19:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25356633..25357508 | 2050..1175 | 4380 | 100 | Minus |
| 3R | 32079331 | 3R | 25396712..25397494 | 799..17 | 3915 | 100 | Minus |
| 3R | 32079331 | 3R | 25357871..25358118 | 1045..798 | 1240 | 100 | Minus |
| 3R | 32079331 | 3R | 25352007..25352195 | 2695..2507 | 945 | 100 | Minus |
| 3R | 32079331 | 3R | 25356396..25356570 | 2224..2050 | 875 | 100 | Minus |
| 3R | 32079331 | 3R | 25354147..25354316 | 2511..2342 | 850 | 100 | Minus |
| 3R | 32079331 | 3R | 25357571..25357701 | 1175..1045 | 655 | 100 | Minus |
| 3R | 32079331 | 3R | 25356224..25356344 | 2342..2222 | 605 | 100 | Minus |
| X | 23542271 | X | 16376670..16376751 | 1057..1138 | 200 | 82.9 | Plus |
Blast to na_te.dros performed 2014-11-28 02:19:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6773..6853 | 290..371 | 146 | 67.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6784..6840 | 289..347 | 119 | 69.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6707..6765 | 289..347 | 115 | 66.1 | Plus |
BS10459.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:48:17 Download gff for
BS10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fur1-RF | 862..3538 | 17..2693 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:22 Download gff for
BS10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fur1-RD | 673..3349 | 17..2693 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:53:16 Download gff for
BS10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fur1-RF | 862..3538 | 17..2693 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:08:53 Download gff for
BS10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fur1-RD | 673..3349 | 17..2693 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:08:53 Download gff for
BS10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25352009..25352192 | 2510..2693 | 100 | <- | Minus |
| 3R | 25354149..25354315 | 2343..2509 | 100 | <- | Minus |
| 3R | 25356224..25356342 | 2224..2342 | 100 | <- | Minus |
| 3R | 25356397..25356570 | 2050..2223 | 100 | <- | Minus |
| 3R | 25356634..25357508 | 1175..2049 | 100 | <- | Minus |
| 3R | 25357572..25357700 | 1046..1174 | 100 | <- | Minus |
| 3R | 25357871..25358116 | 800..1045 | 100 | <- | Minus |
| 3R | 25396712..25397494 | 17..799 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:22 Download gff for
BS10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21177731..21177914 | 2510..2693 | 100 | <- | Minus |
| arm_3R | 21179871..21180037 | 2343..2509 | 100 | <- | Minus |
| arm_3R | 21181946..21182064 | 2224..2342 | 100 | <- | Minus |
| arm_3R | 21182119..21182292 | 2050..2223 | 100 | <- | Minus |
| arm_3R | 21182356..21183230 | 1175..2049 | 100 | <- | Minus |
| arm_3R | 21183294..21183422 | 1046..1174 | 100 | <- | Minus |
| arm_3R | 21183593..21183838 | 800..1045 | 100 | <- | Minus |
| arm_3R | 21222434..21223216 | 17..799 | 100 | | Minus |
BS10459.3prime Sequence
920 bp (763 high quality bases) assembled on 2006-04-19
> BS10459.3prime
ATGGTCTAGAAAGCTTTTATCTAATGCATTTGATAATGTTGTTTTTGTTC
TTGTTGTTGTTGTCGTTGGCATGTTTAAAGTTTAGAAAGAAGACTTGCAT
GATCATAAAAAAGAGTAAGGACAAACCTAAGCACTTGCGATCGCTCCACT
TAAGGCACGCGGCGGTGTTGCTGTGATCTCGGGTCATGCCCACCTCGCCC
ACCTGCTGCATATTCCTCCACTGGCCGGTGGAATCGTACTCGACGTCATT
GTGGGCCATATCGTTGCCGTACAGATTGAACTGGTTCGACTGGCTGGGAT
TGGCCACGTCATCGGGTTGGGCGGGCGTTTCGGTGCCGTAGAATATCATA
TCCCATTGTGTGATTTGTGCCATATAGCGACCCTCGTTGTGGATCTCCAG
CTGCCAGTTTCCTTGCGGCGACTCTCCCCAGGTGTGCACAGACATGAAGG
GCCATTGATTGAATCCGGAACGAGAGTTGTCATGTATCCTAGGCGTTAGG
AGCGTGACACTGGTGTTTGCGGGAGACCTCAAAAAGAGCTGAATGTCTCC
TCGTCTCTGCGACGTTAGCGTAATCTTGGCCTGGACGTGCTCCAGGTAAT
TGACCGATCGACAGTGATTAACCGTCAGTTGCAGGGTGATATGGGTACGA
GGTGGAATGACCTTGTCGACATGGGGAGCGTTAATCTCGCACCGCTGCTG
CTCCGGCACCGCCTTCCAGTTGCGGGCCACGCGCACCATCTCGGCGGCGT
CCATCAATCCGTAGCCAAAGGAGTGGCTCACCCGCCGCCCCACCCCATTG
CGTGACCAGCTGGGGTCCTTAAGGTTCGCCGGCTTGGCGGTGCGCACAAC
AATGTGCTGCAGATCGCGCCAGGTGAGATTCTGGTTGGACTGCAGCAACA
GGGCGGCTATGCCAGCGGCG
BS10459.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:49:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10772-PF | 2679 | Fur1-RF | 1776..2679 | 920..17 | 4495 | 99.8 | Minus |
| CG10772-PD | 2679 | Fur1-RD | 1776..2679 | 920..17 | 4495 | 99.8 | Minus |
| CG10772-PC | 2679 | Fur1-RC | 1776..2679 | 920..17 | 4495 | 99.8 | Minus |
| CG10772-PA | 3306 | Fur1-RA | 1776..2569 | 920..127 | 3945 | 99.8 | Minus |
| CG10772-PE | 2700 | Fur1-RE | 1776..2493 | 920..203 | 3565 | 99.8 | Minus |
| CG10772-PB | 3810 | Fur1-RB | 1776..2326 | 920..370 | 2730 | 99.8 | Minus |
| CG10772-PB | 3810 | Fur1-RB | 3457..3810 | 370..17 | 1770 | 100 | Minus |
| CG10772-PE | 2700 | Fur1-RE | 2512..2700 | 205..17 | 945 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:20:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fur1-RI | 6225 | CG10772-RI | 2513..3416 | 920..17 | 4505 | 99.9 | Minus |
| Fur1-RC | 3912 | CG10772-RC | 2513..3416 | 920..17 | 4505 | 99.9 | Minus |
| Fur1-RD | 3847 | CG10772-RD | 2448..3351 | 920..17 | 4505 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:20:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25356633..25356891 | 662..920 | 1280 | 99.6 | Plus |
| 3R | 32079331 | 3R | 25352007..25352195 | 17..205 | 945 | 100 | Plus |
| 3R | 32079331 | 3R | 25356396..25356570 | 488..662 | 875 | 100 | Plus |
| 3R | 32079331 | 3R | 25354147..25354316 | 201..370 | 850 | 100 | Plus |
| 3R | 32079331 | 3R | 25356224..25356344 | 370..490 | 605 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 11:20:51 has no hits.
BS10459.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:40:42 Download gff for
BS10459.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fur1-PD | 1776..2679 | 17..920 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:01:45 Download gff for
BS10459.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10772-PF | 1776..2679 | 17..920 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 21:54:29 Download gff for
BS10459.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fur1-RD | 2448..3354 | 10..920 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:38:55 Download gff for
BS10459.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fur1-RD | 2448..3354 | 10..920 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:38:55 Download gff for
BS10459.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25354149..25354315 | 203..369 | 100 | <- | Plus |
| 3R | 25356224..25356342 | 370..488 | 100 | <- | Plus |
| 3R | 25356397..25356570 | 489..662 | 100 | <- | Plus |
| 3R | 25356634..25356891 | 663..920 | 99 | | Plus |
| 3R | 25352004..25352192 | 10..202 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 21:54:29 Download gff for
BS10459.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21177726..21177914 | 10..202 | 97 | <- | Plus |
| arm_3R | 21179871..21180037 | 203..369 | 100 | <- | Plus |
| arm_3R | 21181946..21182064 | 370..488 | 100 | <- | Plus |
| arm_3R | 21182119..21182292 | 489..662 | 100 | <- | Plus |
| arm_3R | 21182356..21182613 | 663..920 | 99 | | Plus |
BS10459.5prime Sequence
940 bp (885 high quality bases) assembled on 2006-04-19
> BS10459.5prime
GAAGTTATCAGTCGACATGAAAAACGACGTCGTGCGATGGAGCAGGCAGC
CAACTAGCAACACCACTAACAGCAGCAGCAGCAGTAGAAGCGATAGCAAC
AGCACTCATAAGCACAGAAGCAAAAGCAACAAATTAAATGCTCGACAATT
AGGGTCAAATGCTGCCAGAAGTTGTCAGCAAAGATCCTCTGTGGCAACAA
CACTAGAAGATGAACAACAAACAATCATTGAATGTGATATAGGAAATTTC
AATTTCGATTGCAATTTATTCAAAACTAGTTTTTTAACGCAACACAAACA
GAAACGTAGTGGCAAGAGCAGCAGCAAAAGTAAGAGCAACAGAAGTAGAC
CCCTAGCGAAAACGAAAGCGGTGTTTCTATTAGCTCTGCAATTTAGTGCC
GTAGTTTTTTTATGTAATATTAATGTCGGTTTCGTGGCCGGAAGTGTGGC
AACTGCGGCATCATCGGCAGGCGGCTCATCGCCGGCAGCTCCATCATCTG
CGCCCTCATCCCCGCCCACAGTTGCTGTACCACCGCCGCCGCCACCTTCG
TCGGCACTCAAAGTGGATCCAAATGGTCAGTCACCAGTGCTGCCGCCCTA
CGTTCTCGATTATGAGACGGGGGGCAAGGCCAAGCTAACGCCAAACAATG
GCAAGTTCGGCCAATCGGGCAGTTCCGGGAGCAATAACAACCACATCGTC
GGACACTATACCCACACCTGGGCGGTGCACATACCAAACGGCGATNATGG
CATGGCCGATGCGGTTGCCAAGGATCACGGATTCGTCAATTTGGGGCAGA
TCTTCGATGATCACTACCACTTCGCACATCACAAGGTCTCGAAGCGGTCG
CTCTCCCCGCCACGCATCACCAGACTCGCCTGGATGACGACGATCGCGTC
CACTGGGCGAAGCAGCAGCGGGGCCAGTCGCGATCAAAAC
BS10459.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:49:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10772-PF | 2679 | Fur1-RF | 1..842 | 17..858 | 4141 | 99.6 | Plus |
| CG10772-PD | 2679 | Fur1-RD | 1..842 | 17..858 | 4141 | 99.6 | Plus |
| CG10772-PE | 2700 | Fur1-RE | 1..842 | 17..858 | 4141 | 99.6 | Plus |
| CG10772-PB | 3810 | Fur1-RB | 1..842 | 17..858 | 4141 | 99.6 | Plus |
| CG10772-PC | 2679 | Fur1-RC | 1..842 | 17..858 | 4141 | 99.6 | Plus |
| CG10772-PA | 3306 | Fur1-RA | 1..842 | 17..858 | 4141 | 99.6 | Plus |
| CG10772-PF | 2679 | Fur1-RF | 840..920 | 855..935 | 355 | 97.5 | Plus |
| CG10772-PD | 2679 | Fur1-RD | 840..920 | 855..935 | 355 | 97.5 | Plus |
| CG10772-PE | 2700 | Fur1-RE | 840..920 | 855..935 | 355 | 97.5 | Plus |
| CG10772-PB | 3810 | Fur1-RB | 840..920 | 855..935 | 355 | 97.5 | Plus |
| CG10772-PC | 2679 | Fur1-RC | 840..920 | 855..935 | 355 | 97.5 | Plus |
| CG10772-PA | 3306 | Fur1-RA | 840..920 | 855..935 | 355 | 97.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:47:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fur1-RJ | 5346 | CG10772-RJ | 738..1662 | 17..940 | 4514 | 99.2 | Plus |
| Fur1-RI | 6225 | CG10772-RI | 738..1662 | 17..940 | 4514 | 99.2 | Plus |
| Fur1-RH | 3735 | CG10772-RH | 738..1662 | 17..940 | 4514 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:47:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25396716..25397494 | 795..17 | 3884 | 99.9 | Minus |
| 3R | 32079331 | 3R | 25357975..25358120 | 940..796 | 635 | 97.3 | Minus |
Blast to na_te.dros performed 2015-02-11 09:47:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6506..6817 | 40..348 | 156 | 55 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6773..6853 | 290..371 | 146 | 67.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6663..6786 | 220..347 | 126 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6784..6840 | 289..347 | 119 | 69.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6707..6765 | 289..347 | 115 | 66.1 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3290..3337 | 312..358 | 111 | 72.9 | Plus |
BS10459.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:40:43 Download gff for
BS10459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fur1-PD | 1..925 | 17..940 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:01:47 Download gff for
BS10459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10772-PC | 1..925 | 17..940 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:56:52 Download gff for
BS10459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fur1-RH | 734..1662 | 9..940 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:08:09 Download gff for
BS10459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fur1-RH | 734..1662 | 9..940 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:08:09 Download gff for
BS10459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25357975..25358116 | 800..940 | 97 | <- | Minus |
| 3R | 25396712..25397498 | 9..799 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:56:52 Download gff for
BS10459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21183697..21183838 | 800..940 | 97 | <- | Minus |
| arm_3R | 21222434..21223220 | 9..799 | 99 | | Minus |
BS10459.pep Sequence
Translation from 16 to 2694
> BS10459.pep
MKNDVVRWSRQPTSNTTNSSSSSRSDSNSTHKHRSKSNKLNARQLGSNAA
RSCQQRSSVATTLEDEQQTIIECDIGNFNFDCNLFKTSFLTQHKQKRSGK
SSSKSKSNRSRPLAKTKAVFLLALQFSAVVFLCNINVGFVAGSVATAASS
AGGSSPAAPSSAPSSPPTVAVPPPPPPSSALKVDPNGQSPVLPPYVLDYE
TGGKAKLTPNNGKFGQSGSSGSNNNHIVGHYTHTWAVHIPNGDNGMADAV
AKDHGFVNLGKIFDDHYHFAHHKVSKRSLSPATHHQTRLDDDDRVHWAKQ
QRAKSRSKRDFIRMRPSRTSSRAMSMVDAMSFNDSKWPQMWYLNRGGGLD
MNVIPAWKMGITGKGVVVTILDDGLESDHPDIQDNYDPKASYDVNSHDDD
PMPHYDMTDSNRHGTRCAGEVAATANNSFCAVGIAYGASVGGVRMLDGDV
TDAVEARSLSLNPQHIDIYSASWGPDDDGKTVDGPGELASRAFIEGTTKG
RGGKGSIFIWASGNGGREQDNCNCDGYTNSIWTLSISSATEEGHVPWYSE
KCSSTLATTYSSGGQGEKQVVTTDLHHSCTVSHTGTSASAPLAAGIAALV
LQSNQNLTWRDLQHIVVRTAKPANLKDPSWSRNGVGRRVSHSFGYGLMDA
AEMVRVARNWKAVPEQQRCEINAPHVDKVIPPRTHITLQLTVNHCRSVNY
LEHVQAKITLTSQRRGDIQLFLRSPANTSVTLLTPRIHDNSRSGFNQWPF
MSVHTWGESPQGNWQLEIHNEGRYMAQITQWDMIFYGTETPAQPDDVANP
SQSNQFNLYGNDMAHNDVEYDSTGQWRNMQQVGEVGMTRDHSNTAACLKW
SDRKCLGLSLLFFMIMQVFFLNFKHANDNNNKNKNNIIKCIR*
BS10459.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:51:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fur1-PI | 892 | CG10772-PI | 1..892 | 1..892 | 4778 | 100 | Plus |
| Fur1-PC | 892 | CG10772-PC | 1..892 | 1..892 | 4778 | 100 | Plus |
| Fur1-PD | 892 | CG10772-PD | 1..892 | 1..892 | 4778 | 100 | Plus |
| Fur1-PF | 892 | CG10772-PF | 1..892 | 1..892 | 4778 | 100 | Plus |
| Fur1-PA | 1101 | CG10772-PA | 1..856 | 1..856 | 4587 | 100 | Plus |
