Clone BS10468 Report

Search the DGRC for BS10468

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:104
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG2694-RB
Protein status:BS10468.pep: full length peptide match
Sequenced Size:2054

Clone Sequence Records

BS10468.complete Sequence

2054 bp assembled on 2009-12-07

GenBank Submission: KX803740

> BS10468.complete
GAAGTTATCAGTCGACATGTCCGCGAAGCCAAGTGCCAATTCGGAGGACA
TCCTTCTGGCCGGCCTGCTCCAGGACTGGAAACTAGAGGACCATGACAAC
GCACAGATTGGCTGCGACCCAGCGCCCATGCCGGCCAGTCAATCCGAATT
GGCACTGGTTCATTTGAAGTTGCCGTGCAAGACGCCCCAATCCCAGCCCC
AGGTGGAAGCCCATCAAAATGCTTCAGTTGCGACCGTCAACAGCGACAGC
GGAAGCATAATACTAGTGTCCGATGATTCCTCAGCTACGGCGTGCAGCTT
CCTTCACTCGTCCGAGCTCTGTAACTCCTCCGACTTCGAAGAACTGCGCA
AGGAGTTCACCGAGGACTCCTCATACATCGATCTCTCACTTGATTCGGGC
AGCAGCAATCCTAGTGCCATTGAAACCGACATGAAGACACACAAACTGGG
CGCGAAGCGCAGATCGCCGCAGACCAAGGGCGATGTGTTGGCCAAAAAGA
TTTCTTACCAGAATCTGAACGAGATGAACATCTCCTCGAATCAACCCGTG
GTGACGCGCAGTGGTCGTGTTGTGGTCTCACGTCCGAACCAGCAGTTTGA
CTACTCCTCCTCCTCCCAGTCGAAGGGCGATGGCGAGGAGGACTCCGACG
AGGTGTCACTGGATGCCGACGACGATGAGTATGAGGGAGAAGATTTCGAT
CAGCTCAAGTGGACGGAGCGCAAACGGCGTAGCTTTAGAAACACCAGCTT
AGCCTTCAGCCCCGATGGCAGCCGCTCGTCGCCGGAGGCAACACCTCCGA
TGGTCTATGTCGAATTGGGCGGCAAAATCGTGATCATTAGGGATAAACCA
CAGCCCAATATCGTTCTGGAAGACGATAAGGAACTCAAGACGCAGATGCA
CAAGTTTTTGGGTCTGATTCCATCACGTCGCAAGCTCTTCGATCCGTCGG
AATACAATATGGATCGGGGGGATATTGAGATGGATGTGTACGTACCGACC
AGTCTTGTTACCAATCCATCACCTAGGTCCTCACCAAGCCCAGTTACTCC
ATCGGCCAGGTCACGAATATGGCAGGAAACAACGCCGACATCCATTTGCT
CCAACTTGAATTTATCGCATACCTACACACCGACCGTGAATGAGCTCCAG
ACTAAGCACATGGATGACTCTATAATCCAGGTGAATTTGGACTGCTTTCA
GAAGAAAACACCAGACTCTGTCAAGGAGCCCATTGATCTAAGCGAGCTTC
CCAGCCAAAAGCAACTAGCCACCAACTGCCGCCGCCACAAGAGCTGTGTA
GCCCGCCTGGAGCGGCACCCACATTTCTACGGTTTCGTCCAGTCGCTCAG
ACCGTCAGTCTCGCTCAACATGTGCCATCCGCTGGCCCTCACCTTCCGGC
GGACCAATTTCCAGCAATCTAAGGTGGCACTGGCCAAGGTTCTGTTCAAC
ATGTTCAATCACGCGGTCTTCCACTGTGGCCTGCAGGTGCCCATTGTTTG
GAAGCACGCAATGAAGAAGCGCTGGAAATGCGAGCTTGGCTTCGACGCCT
CCGGCAGGCGCACAGCACAGATCCTGCTTCTGCACAGCATAGACACTGCG
GCCGAGCTTATCTATCTCCTGCTGCACGAGATGTGCCATGTGGCGGCTTT
CCTGTTCAACCGGGAGTTGGGTCACGGCGACAACTGCCGCAGATGGACCT
ACCAGGCGAAGATGGCCTTTCCGGAGGTGCCCGCCCTCATGGAGTGCATA
GCTAGCTTCATGTATACGTGCAGCATGTGCAGCCGTTCCTCCTACGGCTT
GGCCGACTTGAAATCGTACAACATACGCTGCTACTACTGCCAGTTCGAGG
TGAGCGTGAAGCCCGTTAGCAAGGCGAACATGCACGAGGGCGCCCGTTCC
GATCGGACGATGACACCGTTCAAGTGTTTCATCCGTGACAAGTATTTGAA
GCTGGGCGCGGAGGGGGGCGTCACACACTCCTCGAAGATGGCGCTACTCA
ACGAAATGTTCGCGAAGATGACAGCCGCCACGGAATAGAAGCTTTCTAGA
CCAT

BS10468.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:25:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG2694-RD 2469 CG2694-PD 443..2469 12..2038 10120 100 Plus
CG2694-RA 2478 CG2694-PA 452..2478 12..2038 10120 100 Plus
CG2694-RB 2022 CG2694-PB 1..2022 17..2038 10110 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:25:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG2694-RD 3066 CG2694-RD 494..2520 12..2038 10120 100 Plus
CG2694-RB 3152 CG2694-RB 580..2606 12..2038 10120 100 Plus
CG2694-RA 3075 CG2694-RA 503..2529 12..2038 10120 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:25:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2715514..2716706 504..1696 5965 100 Plus
X 23542271 X 2714885..2715280 12..407 1965 99.7 Plus
X 23542271 X 2716765..2717108 1695..2038 1720 100 Plus
2L 23513712 2L 6758086..6758870 2004..1223 1475 79.5 Minus
X 23542271 X 2715338..2715433 408..503 480 100 Plus
2L 23513712 2L 6759133..6759281 945..797 325 81.2 Minus
Blast to na_te.dros performed on 2014-11-28 02:25:42 has no hits.

BS10468.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:54 Download gff for BS10468.complete
Subject Subject Range Query Range Percent Splice Strand
CG2694-RC 165..2186 17..2038 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:14:00 Download gff for BS10468.complete
Subject Subject Range Query Range Percent Splice Strand
CG2694-RA 508..2529 17..2038 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:16:21 Download gff for BS10468.complete
Subject Subject Range Query Range Percent Splice Strand
CG2694-RC 165..2186 17..2038 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:12 Download gff for BS10468.complete
Subject Subject Range Query Range Percent Splice Strand
CG2694-RA 508..2529 17..2038 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:12 Download gff for BS10468.complete
Subject Subject Range Query Range Percent Splice Strand
X 2716766..2717108 1696..2038 100   Plus
X 2714890..2715280 17..407 100 -> Plus
X 2715338..2715433 408..503 100 -> Plus
X 2715514..2716705 504..1695 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:14:00 Download gff for BS10468.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2608923..2609313 17..407 100 -> Plus
arm_X 2609371..2609466 408..503 100 -> Plus
arm_X 2609547..2610738 504..1695 100 -> Plus
arm_X 2610799..2611141 1696..2038 100   Plus

BS10468.3prime Sequence

914 bp (848 high quality bases) assembled on 2006-04-19

> BS10468.3prime
ATGGTCTAGAAAGCTTCTATTCCGTGGCGGCTGTCATCTTCGCGAACATT
TCGTTGAGTAGCGCCATCTTCGAGGAGTGTGTGACGCCCCCCTCCGCGCC
CAGCTTCAAATACTTGTCACGGATGAAACACTTGAACGGTGTCATCGTCC
GATCGGAACGGGCGCCCTCGTGCATGTTCGCCTTGCTAACGGGCTTCACG
CTCACCTCGAACTGGCAGTAGTAGCAGCGTATGTTGTACGATTTCAAGTC
GGCCAAGCCGTAGGAGGAACGGCTGCACATGCTGCACGTATACATGAAGC
TAGCTATGCACTCCATGAGGGCGGGCACCTCCGGAAAGGCCATCTTCGCC
TGGTAGGTCCATCTGCGGCAGTTGTCGCCGTGACCCAACTCCCGGTTGAA
CAGGAAAGCCGCCACATGGCACATCTCGTGCAGCAGGAGATAGATAAGCT
CGGCCGCAGTGTCTATGCTGTGCAGAAGCAGGATCTGTGCTGTGCGCCTG
CCGGAGGCGTCGAAGCCAAGCTCGCATTTCCAGCGCTTCTTCATTGCGTG
CTTCCAAACAATGGGCACCTGCAGGCCACAGTGGAAGACCGCGTGATTGA
ACATGTTGAACAGAACCTTGGCCAGTGCCACCTTAGATTGCTGGAAATTG
GTCCGCCGGAAGGTGAGGGCCAGCGGATGGCACATGTTGAGCGAGACTGA
CGGTCTGAGCGACTGGACGAAACCGTAGAAATGTGGGTGCCGCTCCAGGC
GGGCTACACAGCTCTTGTGGCGGCGGCAGTTGGTGGCTAGTTGCTTTTGG
CTGGGAAGCTCGCTTAGATCAATGGGCTCCTTGACAGAGTCTGGTGTTTT
CTTTCTGAAGCAGTCCAAATTCACCTGGATTATAGAGTCATCCATGTGCT
TAGTCTGGAGCTCA

BS10468.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:49:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG2694-PA 2478 CG2694-RA 1642..2478 853..17 4185 100 Minus
CG2694-PB 2022 CG2694-RB 1186..2022 853..17 4185 100 Minus
CG2694-PC 2022 CG2694-RC 1186..2022 853..17 4185 100 Minus
CG11322-PA 1479 CG11322-RA 859..951 634..542 315 93.5 Minus
CG11322-PA 1479 CG11322-RA 1056..1155 437..338 300 92 Minus
CG2694-PA 2478 CG2694-RA 1581..1637 914..858 285 100 Minus
CG2694-PB 2022 CG2694-RB 1125..1181 914..858 285 100 Minus
CG2694-PC 2022 CG2694-RC 1125..1181 914..858 285 100 Minus
CG11322-PA 1479 CG11322-RA 1270..1302 226..194 165 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 17:21:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG2694-RD 3066 CG2694-RD 1623..2520 914..17 4445 99.8 Minus
CG2694-RB 3152 CG2694-RB 1709..2606 914..17 4445 99.8 Minus
CG2694-RA 3075 CG2694-RA 1632..2529 914..17 4445 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 17:21:26
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2716151..2716706 914..359 2720 99.3 Minus
X 23542271 X 2716765..2717108 360..17 1720 100 Minus
2L 23513712 2L 6758086..6758870 51..832 1475 79.5 Plus
Blast to na_te.dros performed on 2015-02-06 17:21:30 has no hits.

BS10468.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:40:58 Download gff for BS10468.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2694-PB 1126..2022 17..913 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:02:09 Download gff for BS10468.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2694-PB 1126..2022 17..913 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:31:36 Download gff for BS10468.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2694-RA 1633..2529 17..913 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:29:13 Download gff for BS10468.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2694-RA 1633..2529 17..913 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:29:13 Download gff for BS10468.3prime
Subject Subject Range Query Range Percent Splice Strand
X 2716152..2716705 360..913 99 -> Minus
X 2716766..2717108 17..359 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:31:36 Download gff for BS10468.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2610185..2610738 360..913 99 -> Minus
arm_X 2610799..2611141 17..359 100   Minus

BS10468.5prime Sequence

820 bp (757 high quality bases) assembled on 2006-04-19

> BS10468.5prime
GAAGTTATCAGTCGACATGTCCGCGAAGCCAAGTGCCAATTCGGAGGACA
TCCTTCTGGCCGGCCTGCTCCAGGACTGGAAACTAGAGGACCATGACAAC
GCACAGATTGGCTGCGACCCAGCGCCCATGCCGGCCAGTCAATCCGAATT
GGCACTGGTTCATTTGAAGTTGCCGTGCAAGACGCCCCAATCCCAGCCCC
AGGTGGAAGCCCATCAAAATGCTTCAGTTGCGACCGTCAACAGCGACAGC
GGAAGCATAATACTAGTGTCCGATGATTCCTCAGCTACGGCGTGCAGCTT
CCTTCACTCGTCCGAGCTCTGTAACTCCTCCGACTTCGAAGAACTGCGCA
AGGAGTTCACCGAGGACTCCTCATACATCGATCTCTCACTTGATTCGGGC
AGCAGCAATCCTAGTGCCATTGAAACCGACATGAAGACACACAAACTGGG
CGCGAAGCGCAGATCGCCGCAGACCAAGGGCGATGTGTTGGCCAAAAAGA
TTTCTTACCAGAATCTGAACGAGATGAACATCTCCTCGAATCAACCCGTG
GTGACGCGCAGTGGTCGTGTTGTGGTCTCACGTCCGAACCAGCAGTTTGA
CTACTCCTCCTCCTCCCAGTCGAAGGGCGATGGCGAGGAGGACTCCGACG
AGGTGTCACTGGATGCCGACGACGATGAGTATGAGGGAGAAGATTTCGAT
CAGCTCAAGTGGACGGAGCGCAAACGGCGTAGCTTTAGAAACACCAGCTT
AGCCTTCAGCCCCGATGGCAGCCGCTCGTCGCCGGAGGCAACACCTCCGA
TGGTCTATGTCGAATTGGGC

BS10468.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:49:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG2694-PA 2478 CG2694-RA 457..1260 17..820 4020 100 Plus
CG2694-PB 2022 CG2694-RB 1..804 17..820 4020 100 Plus
CG2694-PC 2022 CG2694-RC 1..804 17..820 4020 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 04:40:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG2694-RD 3066 CG2694-RD 494..1302 12..820 4030 99.9 Plus
CG2694-RB 3152 CG2694-RB 580..1388 12..820 4030 99.9 Plus
CG2694-RA 3075 CG2694-RA 503..1311 12..820 4030 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 04:39:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2714885..2715280 12..407 1965 99.7 Plus
X 23542271 X 2715514..2715830 504..820 1585 100 Plus
X 23542271 X 2715338..2715433 408..503 480 100 Plus
Blast to na_te.dros performed on 2015-02-10 04:40:03 has no hits.

BS10468.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:40:59 Download gff for BS10468.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2694-PC 1..804 17..820 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:02:11 Download gff for BS10468.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2694-PC 1..804 17..820 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:46:18 Download gff for BS10468.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2694-RA 496..1311 5..820 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 07:23:53 Download gff for BS10468.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2694-RA 496..1311 5..820 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 07:23:53 Download gff for BS10468.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2714878..2715280 5..407 99 -> Plus
X 2715338..2715433 408..503 100 -> Plus
X 2715514..2715830 504..820 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:46:18 Download gff for BS10468.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2608911..2609313 5..407 99 -> Plus
arm_X 2609371..2609466 408..503 100 -> Plus
arm_X 2609547..2609863 504..820 100   Plus

BS10468.pep Sequence

Translation from 16 to 2037

> BS10468.pep
MSAKPSANSEDILLAGLLQDWKLEDHDNAQIGCDPAPMPASQSELALVHL
KLPCKTPQSQPQVEAHQNASVATVNSDSGSIILVSDDSSATACSFLHSSE
LCNSSDFEELRKEFTEDSSYIDLSLDSGSSNPSAIETDMKTHKLGAKRRS
PQTKGDVLAKKISYQNLNEMNISSNQPVVTRSGRVVVSRPNQQFDYSSSS
QSKGDGEEDSDEVSLDADDDEYEGEDFDQLKWTERKRRSFRNTSLAFSPD
GSRSSPEATPPMVYVELGGKIVIIRDKPQPNIVLEDDKELKTQMHKFLGL
IPSRRKLFDPSEYNMDRGDIEMDVYVPTSLVTNPSPRSSPSPVTPSARSR
IWQETTPTSICSNLNLSHTYTPTVNELQTKHMDDSIIQVNLDCFQKKTPD
SVKEPIDLSELPSQKQLATNCRRHKSCVARLERHPHFYGFVQSLRPSVSL
NMCHPLALTFRRTNFQQSKVALAKVLFNMFNHAVFHCGLQVPIVWKHAMK
KRWKCELGFDASGRRTAQILLLHSIDTAAELIYLLLHEMCHVAAFLFNRE
LGHGDNCRRWTYQAKMAFPEVPALMECIASFMYTCSMCSRSSYGLADLKS
YNIRCYYCQFEVSVKPVSKANMHEGARSDRTMTPFKCFIRDKYLKLGAEG
GVTHSSKMALLNEMFAKMTAATE*

BS10468.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:32:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG2694-PD 822 CG2694-PD 150..822 1..673 3529 100 Plus
CG2694-PB 673 CG2694-PB 1..673 1..673 3529 100 Plus
CG2694-PA 825 CG2694-PA 153..825 1..673 3529 100 Plus
CG11322-PB 480 CG11322-PB 1..480 139..673 1415 56.1 Plus
CG14814-PD 1030 CG14814-PD 769..1003 439..667 224 28.1 Plus