Clone Sequence Records
BS10510.5prime Sequence
333 bp (332 high quality bases) assembled on 2006-04-19
> BS10510.5prime
GAAGTTATCAGTCGACATGGCCAAGGATTGCAATTGGAAAGTGGCACCAA
ATTGGGGGAAATGCATGTGGCAACCAGCCGGAGTTCCCGATTCTACAACT
GGGATTTCAGGTTGGTACGATGGCAGGATGGCAGGATGGCAGGATTGCAC
GATGGCAAGATGGCAGGATAGCAGGAGCACCGCGACGCATTTATTAGCAT
TTTTATGTGTACACTTTTTCGAGCACTTTTTGAACATTTCTGATTCGGCG
AGGCGAGGGTTTTTAATTAAGTTTGAGAATAGAGAGGTGAGTGGGATGAG
TTTGAAACTCTCCAGTTGAAAGCTTTCTAGACC
BS10510.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:50:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32827-PA | 303 | CG32827-RA | 1..303 | 17..319 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 11:29:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:28:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19413051..19413354 | 16..319 | 1520 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:29:02 has no hits.
BS10510.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:42:02 Download gff for
BS10510.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32827-PA | 1..303 | 17..319 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:03:39 Download gff for
BS10510.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32827-PA | 1..303 | 17..319 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:39:01 Download gff for
BS10510.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19413051..19413358 | 16..325 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:39:01 Download gff for
BS10510.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19413051..19413358 | 16..325 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:15:23 Download gff for
BS10510.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19307084..19307391 | 16..325 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:15:23 Download gff for
BS10510.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19307084..19307391 | 16..325 | 99 | | Plus |
BS10510.3prime Sequence
333 bp (332 high quality bases) assembled on 2006-04-19
> BS10510.3prime
ATGGTCTAGAAAGCTTTCAACTGGAGAGTTTCAAACTCATCCCACTCACC
TCTCTATTCTCAAACTTAATTAAAAACCCTCGCCTCGCCGAATCAGAAAT
GTTCAAAAAGTGCTCGAAAAAGTGTACACATAAAAATGCTAATAAATGCG
TCGCGGTGCTCCTGCTATCCTGCCATCTTGCCATCGTGCAATCCTGCCAT
CCTGCCATCCTGCCATCGTACCAACCTGAAATCCCAGTTGTAGAATCGGG
AACTCCGGCTGGTTGCCACATGCATTTCCCCCAATTTGGTGCCACTTTCC
AATTGCAATCCTTGGCCATGTCGACTGATAACT
BS10510.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:50:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32827-PA | 303 | CG32827-RA | 1..303 | 319..17 | 1515 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-13 15:42:36 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:42:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19413051..19413354 | 320..17 | 1520 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 15:42:34 has no hits.
BS10510.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:42:02 Download gff for
BS10510.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32827-PA | 1..303 | 17..319 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:03:38 Download gff for
BS10510.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32827-PA | 1..303 | 17..319 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:06:05 Download gff for
BS10510.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19413051..19413358 | 11..320 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:06:05 Download gff for
BS10510.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19413051..19413358 | 11..320 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 15:44:20 Download gff for
BS10510.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19307084..19307391 | 11..320 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 15:44:20 Download gff for
BS10510.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19307084..19307391 | 11..320 | 99 | | Minus |
BS10510.complete Sequence
335 bp (335 high quality bases) assembled on 2006-03-25
> BS10510.complete
GAAGTTATCAGTCGACATGGCCAAGGATTGCAATTGGAAAGTGGCACCAA
ATTGGGGGAAATGCATGTGGCAACCAGCCGGAGTTCCCGATTCTACAACT
GGGATTTCAGGTTGGTACGATGGCAGGATGGCAGGATGGCAGGATTGCAC
GATGGCAAGATGGCAGGATAGCAGGAGCACCGCGACGCATTTATTAGCAT
TTTTATGTGTACACTTTTTCGAGCACTTTTTGAACATTTCTGATTCGGCG
AGGCGAGGGTTTTTAATTAAGTTTGAGAATAGAGAGGTGAGTGGGATGAG
TTTGAAACTCTCCAGTTGAAAGCTTTCTAGACCAT
BS10510.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 15:32:18 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 15:32:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:32:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19413051..19413354 | 16..319 | 1520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:32:17 has no hits.
BS10510.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 13:44:27 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 13:44:27 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:10:17 Download gff for
BS10510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19413052..19413353 | 17..318 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:10:17 Download gff for
BS10510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19413052..19413353 | 17..318 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:35 Download gff for
BS10510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19307085..19307386 | 17..318 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:35 Download gff for
BS10510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19307085..19307386 | 17..318 | 100 | | Plus |
BS10510.pep Sequence
Translation from 16 to 318
> BS10510.pep
MAKDCNWKVAPNWGKCMWQPAGVPDSTTGISGWYDGRMAGWQDCTMARWQ
DSRSTATHLLAFLCVHFFEHFLNISDSARRGFLIKFENREVSGMSLKLSS
*
Sequence BS10510.pep has no blast hits.