Clone Sequence Records
BS10520.3prime Sequence
928 bp (885 high quality bases) assembled on 2006-04-19
> BS10520.3prime
ATGGTCTAGAAAGCTTCTAACGCTTGCCATTCGGCGAATTGAAGCTGCAC
GACAGCATCTCCTCCTTGGCCAACTTGGCGCGATATTCGGCCATCATGTC
GCGGCACTGGATGGCGATGTCCAGCAGCTGCGAGAACATCGACTCGCCCC
GTTTGCAGTACGAGTCCTGGTCGTAGTCCACATAGTTGGTCAGATTGTAC
AGCGCCTTCGACTCGGCGAGGAAGGTCTCCAGTGTGGCATTAACGGTGCG
ATGATACTCCACCACCATCTCCTCCGTCTGCTGCAGGTCGTCGATGGCCT
GGTGCTGCACAATCAGCTCGTCGGACATCTCGTGTTCGCTCAGCGAACTC
AGCATGGCCAGGTCCATGTTGCCGGCGTTTCCGTTCTTGTTGTTGTTATT
ATTATTGTTGTGAATGACCGCCCCCGAGTGATGAGAGGCCGGAGCACGCT
GATTATTCGACTGGCTGGCCGGTGCATGCGAATTGGGATGCAGCTGATGC
GAGTGCGGATGCACCATGTTGAGCTCCTCCTCCTCCTCGTCGTCCGTGAT
CTCGATGGGCTCGGTGTCGCCGCCAGGGCAAACTTCGACGATATCCTTGA
CCACCAGCTCCTTGACACGATCCGCATAGCGCAGCGTGTTGAGCGTGTGC
TCGCAGGAGCTAAGTCCCGGCGAGATCATGGCTATCATGCACGTCTTGCT
CTTCTCGCCAATGAACGAGTCGCGCAGCACCTGGGTGAGTTTGGAGACAC
GGAAGGGCAAGTGGGCCGACTGTTTGCCCAACGCACGAATGCACTCCTTG
AGGGCCAGCAGCGATTTGTTAATCTCGGCACCCTCCATACGCGTCTGCCG
ATCGGCCGAGGAAGTGTCCACGCCCCGCTCATTGCCCCGCAGATCGATGA
ACGAGAACTGCCATGGATCTTCGTCGAG
BS10520.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:50:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1453-PA | 2418 | Klp10A-RA | 1526..2418 | 909..17 | 4415 | 99.7 | Minus |
CG1453-PE | 2418 | Klp10A-RE | 1526..2418 | 909..17 | 4415 | 99.7 | Minus |
CG1453-PD | 2418 | Klp10A-RD | 1526..2418 | 909..17 | 4415 | 99.7 | Minus |
CG1453-PB | 2418 | Klp10A-RB | 1526..2418 | 909..17 | 4415 | 99.7 | Minus |
CG1453-PC | 2418 | Klp10A-RC | 1526..2418 | 909..17 | 4415 | 99.7 | Minus |
CG12192-PA | 2190 | Klp59D-RA | 1468..1517 | 835..786 | 150 | 92 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:26:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Klp10A-RF | 4467 | CG1453-RF | 1937..2849 | 928..17 | 4510 | 99.7 | Minus |
Klp10A-RC | 4543 | CG1453-RC | 2013..2925 | 928..17 | 4510 | 99.7 | Minus |
Klp10A-RB | 4754 | CG1453-RB | 2224..3136 | 928..17 | 4510 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:26:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11132550..11133142 | 337..928 | 2885 | 99.5 | Plus |
X | 23542271 | X | 11130980..11131300 | 17..337 | 1605 | 100 | Plus |
2R | 25286936 | 2R | 23124349..23124603 | 609..860 | 355 | 76.9 | Plus |
2R | 25286936 | 2R | 23143581..23143802 | 887..669 | 355 | 78.4 | Minus |
Blast to na_te.dros performed 2015-02-11 11:26:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 2633..2676 | 411..368 | 130 | 77.3 | Minus |
BS10520.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:42:23 Download gff for
BS10520.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1453-PA | 1506..2418 | 17..928 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:04:07 Download gff for
BS10520.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1453-PC | 1506..2418 | 17..928 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:28:40 Download gff for
BS10520.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klp10A-RD | 1845..2764 | 9..928 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:44:15 Download gff for
BS10520.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klp10A-RB | 2224..3143 | 9..928 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:44:15 Download gff for
BS10520.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11130973..11131300 | 9..337 | 98 | <- | Plus |
X | 11132551..11133142 | 338..928 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:28:40 Download gff for
BS10520.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11025006..11025333 | 9..337 | 98 | <- | Plus |
arm_X | 11026584..11027175 | 338..928 | 99 | | Plus |
BS10520.5prime Sequence
895 bp (715 high quality bases) assembled on 2006-04-19
> BS10520.5prime
GAAGTTATCAGTCGACATGGACATGATTACGGTGGGGCAGAGCGTCAAGA
TCAAGCGGACGGATGGCCGCGTCCACATGGCCGTGGTGGCGGTGATCAAC
CAGTCGGGCAAGTGCATCACAGTCGAATGGTACGAGCGCGGCGAAACGAA
GGGCAAGGAGGTAGAACTGGACGCCATACTCACGCTCAATCCGGAGCTAA
TGCAAGATACTGTCGAACAGCACGCCGCCCCGGAGCCCAAGAAACAAGCC
ACCGCGCCGATGAACCTCTCGCGTAATCCCACACAATCGGCTATCGGTGG
CAATCTCACCAGCCGTATGACCATGGCCGGAAACATGCTGAACAAGATCC
AGGAAAGCCAGTCGATTCCCAATCCGATTGTCAGCAGCAATAGCGTGAAT
ACAAACAGCAACTCCAACACTACGGCCGGCGGAGGTGGTGGCACCACAAC
GTCGACGACCACTGGATTACAGCGTCCACGGTACTCGCAAGCTGCTACCG
GCCAGCAGCAGACAAGGATCGCCTCGGCGGTGCCTAATAACACATTGCCC
AATCCCAGCGCGGCAGCCAGTGCTGGTCCGGCGGCACAAGGAGTCGCCAC
TGCGGCCACAACCCAGGGAGCTGGCGGCGCTAGTACCCGGCGATCGCACG
CATTGAAAGAGGTGGAGCGACTGAAGGAGAATCGCGAGAAGCGACGCGCC
CGACAGGCCGAGATGAAGGAGGAGAAGGTGGCGCTGATGAACCAGGATCC
GGGCAATCCAAACTGGGAGACGGCGCANATGATACGCGAATATCAGAGCA
CGCTGGAATTTGTGCCGCTGCTCGATGGCCAGGCCGTCGATGACCATCAG
ATCACAGTGTGCGTGCGCAAGCGTCCATTAGCCGCAAGGAGGTCA
BS10520.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:50:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1453-PA | 2418 | Klp10A-RA | 1..860 | 17..876 | 4281 | 99.8 | Plus |
CG1453-PE | 2418 | Klp10A-RE | 1..860 | 17..876 | 4281 | 99.8 | Plus |
CG1453-PD | 2418 | Klp10A-RD | 1..860 | 17..876 | 4281 | 99.8 | Plus |
CG1453-PB | 2418 | Klp10A-RB | 1..860 | 17..876 | 4281 | 99.8 | Plus |
CG1453-PC | 2418 | Klp10A-RC | 1..860 | 17..876 | 4281 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:47:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Klp10A-RF | 4467 | CG1453-RF | 431..1311 | 16..895 | 4369 | 99.8 | Plus |
Klp10A-RC | 4543 | CG1453-RC | 507..1387 | 16..895 | 4369 | 99.8 | Plus |
Klp10A-RB | 4754 | CG1453-RB | 718..1598 | 16..895 | 4369 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:47:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11135037..11135917 | 895..16 | 4344 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-11 14:47:45 has no hits.
BS10520.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:42:24 Download gff for
BS10520.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1453-PA | 1..879 | 17..894 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:04:10 Download gff for
BS10520.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1453-PC | 1..879 | 17..894 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:59:24 Download gff for
BS10520.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klp10A-RD | 334..1218 | 10..894 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:07:44 Download gff for
BS10520.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klp10A-RB | 713..1597 | 10..894 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:07:44 Download gff for
BS10520.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11135038..11135922 | 10..894 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:59:24 Download gff for
BS10520.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11029071..11029955 | 10..894 | 99 | | Minus |
BS10520.complete Sequence
2450 bp assembled on 2010-05-10
GenBank Submission: KX803242
> BS10520.complete
GAAGTTATCAGTCGACATGGACATGATTACGGTGGGGCAGAGCGTCAAGA
TCAAGCGGACGGATGGCCGCGTCCACATGGCCGTGGTGGCGGTGATCAAC
CAGTCGGGCAAGTGCATCACAGTCGAATGGTACGAGCGCGGCGAAACGAA
GGGCAAGGAGGTAGAACTGGACGCCATACTCACGCTCAATCCGGAGCTAA
TGCAAGATACTGTCGAACAGCACGCCGCCCCGGAGCCCAAGAAACAAGCC
ACCGCGCCGATGAACCTCTCGCGTAATCCCACACAATCGGCTATCGGTGG
CAATCTCACCAGCCGTATGACCATGGCCGGAAACATGCTGAACAAGATCC
AGGAAAGCCAGTCGATTCCCAATCCGATTGTCAGCAGCAATAGCGTGAAT
ACAAACAGCAACTCCAACACTACGGCCGGCGGAGGTGGTGGCACCACAAC
GTCGACGACCACTGGATTACAGCGTCCACGGTACTCGCAAGCTGCTACCG
GCCAGCAGCAGACAAGGATCGCCTCGGCGGTGCCTAATAACACATTGCCC
AATCCCAGCGCGGCAGCCAGTGCTGGTCCGGCGGCACAAGGAGTCGCCAC
TGCGGCCACAACCCAGGGAGCTGGCGGCGCTAGTACCCGGCGATCGCACG
CATTGAAAGAGGTGGAGCGACTGAAGGAGAATCGCGAGAAGCGACGCGCC
CGACAGGCCGAGATGAAGGAGGAGAAGGTGGCGCTGATGAACCAGGATCC
GGGCAATCCAAACTGGGAGACGGCGCAAATGATACGCGAATATCAGAGCA
CGCTGGAATTTGTGCCGCTGCTCGATGGCCAGGCCGTCGATGACCATCAG
ATCACAGTGTGCGTGCGCAAGCGTCCCATTAGCCGCAAGGAGGTCAATCG
CAAGGAGATCGATGTCATTTCGGTGCCGCGCAAGGACATGCTCATCGTGC
ACGAGCCGCGCAGCAAGGTCGACCTCACCAAGTTCCTGGAGAACCACAAG
TTTCGCTTCGACTACGCCTTCAACGACACGTGCGACAATGCCATGGTATA
CAAATACACAGCCAAGCCGTTGGTGAAAACCATTTTCGAGGGCGGAATGG
CGACGTGCTTCGCCTACGGCCAGACGGGATCGGGCAAAACGCACACCATG
GGCGGTGAGTTTAATGGAAAGGTGCAGGACTGCAAGAACGGCATCTACGC
CATGGCGGCCAAGGATGTCTTTGTGACCCTGAATATGCCGCGTTACCGCG
CCATGAATCTAGTCGTCTCGGCCAGTTTCTTTGAGATTTACAGTGGCAAG
GTCTTCGATCTTCTGTCCGACAAGCAGAAACTGCGCGTCCTGGAGGATGG
TAAACAGCAAGTGCAGGTGGTGGGACTCACCGAGAAGGTGGTCGATGGCG
TCGAGGAGGTACTGAAGCTCATCCAGCACGGCAATGCTGCCCGAACATCC
GGCCAGACGTCGGCCAACTCCAATTCGTCGCGTTCGCACGCCGTTTTCCA
GATTGTGCTGCGGCCGCAGGGCTCGACGAAGATCCATGGCAAGTTCTCGT
TCATCGATCTGGCGGGCAATGAGCGGGGCGTGGACACTTCCTCGGCCGAT
CGGCAGACGCGTATGGAGGGTGCCGAGATTAACAAATCGCTGCTGGCCCT
CAAGGAGTGCATTCGTGCGTTGGGCAAACAGTCGGCCCACTTGCCCTTCC
GTGTCTCCAAACTCACCCAGGTGCTGCGCGACTCGTTCATTGGCGAGAAG
AGCAAGACGTGCATGATAGCCATGATCTCGCCGGGACTTAGCTCCTGCGA
GCACACGCTCAACACGCTGCGCTATGCGGATCGTGTCAAGGAGCTGGTGG
TCAAGGATATCGTCGAAGTTTGCCCTGGCGGCGACACCGAGCCCATCGAG
ATCACGGACGACGAGGAGGAGGAGGAGCTCAACATGGTGCATCCGCACTC
GCATCAGCTGCATCCCAATTCGCATGCACCGGCCAGCCAGTCGAATAATC
AGCGTGCTCCGGCCTCTCATCACTCGGGGGCGGTCATTCACAACAATAAT
AATAACAACAACAAGAACGGAAACGCCGGCAACATGGACCTGGCCATGCT
GAGTTCGCTGAGCGAACACGAGATGTCCGACGAGCTGATTGTGCAGCACC
AGGCCATCGACGACCTGCAGCAGACGGAGGAGATGGTGGTGGAGTATCAT
CGCACCGTTAATGCCACACTGGAGACCTTCCTCGCCGAGTCGAAGGCGCT
GTACAATCTGACCAACTATGTGGACTACGACCAGGACTCGTACTGCAAAC
GGGGCGAGTCGATGTTCTCGCAGCTGCTGGACATCGCCATCCAGTGCCGC
GACATGATGGCCGAATATCGCGCCAAGTTGGCCAAGGAGGAGATGCTGTC
GTGCAGCTTCAATTCGCCGAATGGCAAGCGTTAGAAGCTTTCTAGACCAT
BS10520.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:20:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Klp10A-RF | 2418 | CG1453-PF | 1..2418 | 17..2434 | 12090 | 100 | Plus |
Klp10A-RC | 2418 | CG1453-PC | 1..2418 | 17..2434 | 12090 | 100 | Plus |
Klp10A-RB | 2418 | CG1453-PB | 1..2418 | 17..2434 | 12090 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:20:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Klp10A-RF | 4467 | CG1453-RF | 431..2849 | 16..2434 | 12095 | 100 | Plus |
Klp10A-RC | 4543 | CG1453-RC | 507..2925 | 16..2434 | 12095 | 100 | Plus |
Klp10A-RB | 4754 | CG1453-RB | 718..3136 | 16..2434 | 12095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:20:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11134880..11135917 | 1053..16 | 5190 | 100 | Minus |
X | 23542271 | X | 11132550..11133365 | 2114..1299 | 4080 | 100 | Minus |
X | 23542271 | X | 11130980..11131300 | 2434..2114 | 1605 | 100 | Minus |
X | 23542271 | X | 11133438..11133686 | 1302..1054 | 1245 | 100 | Minus |
2R | 25286936 | 2R | 23124349..23124865 | 1842..1329 | 430 | 73.6 | Minus |
2R | 25286936 | 2R | 23143555..23143802 | 1538..1782 | 380 | 77.8 | Plus |
2R | 25286936 | 2R | 23142958..23143220 | 944..1206 | 370 | 76 | Plus |
2R | 25286936 | 2R | 23125036..23125218 | 1161..979 | 240 | 75.4 | Minus |
Blast to na_te.dros performed 2014-11-27 08:20:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 2633..2676 | 2040..2083 | 130 | 77.3 | Plus |
BS10520.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-10 11:55:22 Download gff for
BS10520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klp10A-RD | 232..2649 | 17..2434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:30:46 Download gff for
BS10520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klp10A-RD | 340..2757 | 17..2434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:16:23 Download gff for
BS10520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klp10A-RB | 719..3136 | 17..2434 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:16:23 Download gff for
BS10520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11130980..11131300 | 2114..2434 | 100 | <- | Minus |
X | 11132551..11133363 | 1301..2113 | 100 | <- | Minus |
X | 11133440..11133686 | 1054..1300 | 100 | <- | Minus |
X | 11134880..11135916 | 17..1053 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:30:46 Download gff for
BS10520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11025013..11025333 | 2114..2434 | 100 | <- | Minus |
arm_X | 11026584..11027396 | 1301..2113 | 100 | <- | Minus |
arm_X | 11027473..11027719 | 1054..1300 | 100 | <- | Minus |
arm_X | 11028913..11029949 | 17..1053 | 100 | | Minus |
BS10520.pep Sequence
Translation from 16 to 2433
> BS10520.pep
MDMITVGQSVKIKRTDGRVHMAVVAVINQSGKCITVEWYERGETKGKEVE
LDAILTLNPELMQDTVEQHAAPEPKKQATAPMNLSRNPTQSAIGGNLTSR
MTMAGNMLNKIQESQSIPNPIVSSNSVNTNSNSNTTAGGGGGTTTSTTTG
LQRPRYSQAATGQQQTRIASAVPNNTLPNPSAAASAGPAAQGVATAATTQ
GAGGASTRRSHALKEVERLKENREKRRARQAEMKEEKVALMNQDPGNPNW
ETAQMIREYQSTLEFVPLLDGQAVDDHQITVCVRKRPISRKEVNRKEIDV
ISVPRKDMLIVHEPRSKVDLTKFLENHKFRFDYAFNDTCDNAMVYKYTAK
PLVKTIFEGGMATCFAYGQTGSGKTHTMGGEFNGKVQDCKNGIYAMAAKD
VFVTLNMPRYRAMNLVVSASFFEIYSGKVFDLLSDKQKLRVLEDGKQQVQ
VVGLTEKVVDGVEEVLKLIQHGNAARTSGQTSANSNSSRSHAVFQIVLRP
QGSTKIHGKFSFIDLAGNERGVDTSSADRQTRMEGAEINKSLLALKECIR
ALGKQSAHLPFRVSKLTQVLRDSFIGEKSKTCMIAMISPGLSSCEHTLNT
LRYADRVKELVVKDIVEVCPGGDTEPIEITDDEEEEELNMVHPHSHQLHP
NSHAPASQSNNQRAPASHHSGAVIHNNNNNNNKNGNAGNMDLAMLSSLSE
HEMSDELIVQHQAIDDLQQTEEMVVEYHRTVNATLETFLAESKALYNLTN
YVDYDQDSYCKRGESMFSQLLDIAIQCRDMMAEYRAKLAKEEMLSCSFNS
PNGKR*
BS10520.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:14:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Klp10A-PF | 805 | CG1453-PF | 1..805 | 1..805 | 4131 | 100 | Plus |
Klp10A-PC | 805 | CG1453-PC | 1..805 | 1..805 | 4131 | 100 | Plus |
Klp10A-PB | 805 | CG1453-PB | 1..805 | 1..805 | 4131 | 100 | Plus |
Klp10A-PD | 805 | CG1453-PD | 1..805 | 1..805 | 4131 | 100 | Plus |
Klp10A-PE | 805 | CG1453-PE | 1..805 | 1..805 | 4131 | 100 | Plus |