Clone Sequence Records
BS10567.3prime Sequence
719 bp (640 high quality bases) assembled on 2006-04-19
> BS10567.3prime
ATGGTCTAGAAAGCTTCTAGGGATTTGGAATTGTTGCATCTTTAGCGCTT
CCGGCCTTAGGGGCTGCGCTCTGACTTGAAATTGCGTTTTTGTCTTTGTC
TGACTTGGCATCCTTGGCCTTGACAGTGGCTGCCTCCTGCTTGAGATACT
CTTCCCGCGCCGCTTCGTAGAGACTAACGAACTTGTCCCGCTGGCCCTTG
TACTGAGCGAAGAGCTCGTCGTCTTTGTGGCCCTTCAATCTGTTCTCGAT
GTCCACCTTCTTGTCGTGCTCGCTGCGTATCTCGTCCGTTACCCAGGGCT
TTTCGATGGGATACTGATTGATCAGGTTCTTTAGTGTCTTTATGCTGCTC
TTGCCTTTCACCACCTGCTTGATTAGCTTGGGATTGGGCTTCATTATCCG
GCCGCCATTCATGTTCATTGGTCCATAAGGTCCGACCGGTGGAATTCCCC
GCGGCGGCATCCGTGGACCCATCATGTGCATGGGCGGTGGGACACCCATC
ATAGGACCTGGACCGGGTCCGTTGCGACGCATAAAGAGCGGTGGCGGCGG
CGGTGGTGGTCCACCCATGGGGCCCATGGGTCCGGGACCGCGCATACCAG
GCACCGGTGGCGGGAAAGGCATTTGCGGGTAAGGTCCTCCAGGGCCCATC
GGTCCGGGTCCCCGTGGTCCGGGGCCCATCGGACCCATTGGTCGACCCAT
CATGAGGCGTGCAGGAGGA
BS10567.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:51:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3218-PA | 1392 | fs(1)K10-RA | 690..1392 | 719..17 | 3440 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 10:42:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)K10-RA | 3052 | CG3218-RA | 861..1563 | 719..17 | 3470 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 10:42:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2242998..2243605 | 719..112 | 2995 | 99.5 | Minus |
| X | 23542271 | X | 2244455..2244552 | 114..17 | 490 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-01 10:42:20 has no hits.
BS10567.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:43:55 Download gff for
BS10567.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3218-PA | 691..1392 | 17..718 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:06:12 Download gff for
BS10567.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3218-PA | 691..1392 | 17..718 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:30:29 Download gff for
BS10567.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 862..1565 | 13..718 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:06:40 Download gff for
BS10567.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 862..1565 | 13..718 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:06:40 Download gff for
BS10567.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2242999..2243604 | 113..718 | 99 | -> | Minus |
| X | 2244457..2244554 | 13..112 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:30:29 Download gff for
BS10567.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2137032..2137637 | 113..718 | 99 | -> | Minus |
| arm_X | 2138490..2138587 | 13..112 | 98 | | Minus |
BS10567.5prime Sequence
869 bp (775 high quality bases) assembled on 2006-04-19
> BS10567.5prime
GAAGTTATCAGTCGACATGGTGTCCAAGAACCAATTCTATCAGAACTGGA
CCATGCAGTCGCAGCAGCAGCACCCGCACCAAATGCAGCAACAGTTTCAG
CAACAGCAGCAGCCAAATCTGCAGCACCGCAACAACCAGAGCAACAATAA
TAATTGCAACAATAATCCCCGCGCAGCTGCGGCTCCGTATAGAAAACCGT
TTCGTTCGGGCAAAATTAACTCCGGACCAGGAGGAAATGGGAATGGTAAC
AGGGTCAACGGTAACAATCAGATGATGTTTTCCTCCAGCCAAATGCCGAG
CGATCCCCTGTACATTGACTTCAGCAGCCCGCCACCAGGATTCAAACACA
ATCAGGTAGGCAGTCCCAAGAAGAAGTCTATGAAGGGCATCAAACAGCAG
CAGCATCCCAGTCCGAACCAGCAGCAGCCTCCCAGTCCGAACCAGCAGCA
GCATCCCAGTCCGAACCAGCAGCAGCATCCCAGTCCGAACCAGCAGCAGC
ATCCCAATTCGAACCAGCAGCAGCATCTCAGTCCGAACCAGCAGCAGGGC
AAGATGAACAACCAGAACAACAATCATATGAACCAGTCGCAGCAGCCCTT
CAACAATCAGATGAACGGAAGCGATTGGCAGCGCCATCCGGGCAACAATC
CCAATCAGATTCGCGGTGGCTTTAATGGATTCCAACGCGGGCCGCCTCCG
AACCGTCCTCCTCCACGCCTCATGATGGGTCCGCCAATGGGTCCGATGGG
CCCCGGACCACGGGGACCCGGACCGATGGGCCCTGGAGGACCTTACCCGC
NAATGCCTTTCCCGCCACCGGTGCCTGGTATGCGCGGTCCCGGACCCATG
GGCCCCATGGGTGGACCAC
BS10567.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:51:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3218-PA | 1392 | fs(1)K10-RA | 1..853 | 17..869 | 4246 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:47:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)K10-RA | 3052 | CG3218-RA | 172..1024 | 17..869 | 4254 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:47:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2242309..2243161 | 17..869 | 4254 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-11 14:47:35 has no hits.
BS10567.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:43:56 Download gff for
BS10567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3218-PA | 1..853 | 17..869 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:06:13 Download gff for
BS10567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3218-PA | 1..853 | 17..869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:59:16 Download gff for
BS10567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 172..1024 | 17..869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:07:37 Download gff for
BS10567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 172..1024 | 17..869 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:07:37 Download gff for
BS10567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2242309..2243161 | 17..869 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:59:16 Download gff for
BS10567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2136342..2137194 | 17..869 | 99 | | Plus |
BS10567.complete Sequence
1424 bp (1424 high quality bases) assembled on 2006-03-25
GenBank Submission: FJ636692
> BS10567.complete
GAAGTTATCAGTCGACATGGTGTCCAAGAACCAATTCTATCAGAACTGGA
CCATGCAGTCGCAGCAGCAGCACCCGCACCAAATGCAGCAACAGTTTCAG
CAACAGCAGCAGCCAAATCTGCAGCACCGCAACAACCAGAGCAACAATAA
TAATTGCAACAATAATCCCCGCGCAGCTGCGGCTCCGTATAGAAAACCGT
TTCGTTCGGGCAAAATTAACTCCGGACCAGGAGGAAATGGGAATGGTAAC
AGGGTCAACGGTAACAATCAGATGATGTTTTCCTCCAGCCAAATGCCGAG
CGATCCCCTGTACATTGACTTCAGCAGCCCGCCACCAGGATTCAAACACA
ATCAGGTAGGCAGTCCCAAGAAGAAGTCTATGAAGGGCATCAAACAGCAG
CAGCATCCCAGTCCGAACCAGCAGCAGCCTCCCAGTCCGAACCAGCAGCA
GCATCCCAGTCCGAACCAGCAGCAGCATCCCAGTCCGAACCAGCAGCAGC
ATCCCAATTCGAACCAGCAGCAGCATCTCAGTCCGAACCAGCAGCAGGGC
AAGATGAACAACCAGAACAACAATCATATGAACCAGTCGCAGCAGCCCTT
CAACAATCAGATGAACGGAAGCGATTGGCAGCGCCATCCGGGCAACAATC
CCAATCAGATTCGCGGTGGCTTTAATGGATTCCAACGCGGGCCGCCTCCG
AACCGTCCTCCTCCACGCCTCATGATGGGTCCGCCAATGGGTCCGATGGG
CCCCGGACCACGGGGACCCGGACCGATGGGCCCTGGAGGACCTTACCCGC
AAATGCCTTTCCCGCCACCGGTGCCTGGTATGCGCGGTCCCGGACCCATG
GGCCCCATGGGTGGACCACCACCGCCGCCGCCACCGCTCTTTATGCGTCG
CAACGGACCCGGTCCAGGTCCTATGATGGGTGTCCCACCGCCCATGCACA
TGATGGGTCCACGGATGCCGCCGCGGGGAATTCCACCGGTCGGACCTTAT
GGACCAATGAACATGAATGGCGGCCGGATAATGAAGCCCAATCCCAAGCT
AATCAAGCAGGTGGTGAAAGGCAAGAGCAGCATAAAGACACTAAAGAACC
TGATCAATCAGTATCCCATCGAAAAGCCCTGGGTAACGGACGAGATACGC
AGCGAGCACGACAAGAAGGTGGACATCGAGAACAGATTGAAGGGCCACAA
AGACGACGAGCTCTTCGCTCAGTACAAGGGCCAGCGGGACAAGTTCGTTA
GTCTCTACGAAGCGGCGCGGGAAGAGTATCTCAAGCAGGAGGCAGCCACT
GTCAAGGCCAAGGATGCCAAGTCAGACAAAGACAAAAACGCAATTTCAAG
TCAGAGCGCAGCCCCTAAGGCCGGAAGCGCTAAAGATGCAACAATTCCAA
ATCCCTAGAAGCTTTCTAGACCAT
BS10567.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:10:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)K10-RA | 1392 | CG3218-PA | 1..1392 | 17..1408 | 6960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:10:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)K10-RA | 3052 | CG3218-RA | 172..1563 | 17..1408 | 6960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:10:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2242309..2243605 | 17..1313 | 6485 | 100 | Plus |
| X | 23542271 | X | 2244455..2244552 | 1311..1408 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:10:56 has no hits.
BS10567.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:36:59 Download gff for
BS10567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 1..1392 | 17..1408 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:22:24 Download gff for
BS10567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 206..1599 | 17..1412 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:41:22 Download gff for
BS10567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 172..1563 | 17..1408 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:36:59 Download gff for
BS10567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 206..1599 | 17..1412 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:46:44 Download gff for
BS10567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 172..1563 | 17..1408 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:46:44 Download gff for
BS10567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2242309..2243604 | 17..1312 | 100 | -> | Plus |
| X | 2244457..2244552 | 1313..1408 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:41:22 Download gff for
BS10567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2136342..2137637 | 17..1312 | 100 | -> | Plus |
| arm_X | 2138490..2138585 | 1313..1408 | 100 | | Plus |
BS10567.pep Sequence
Translation from 16 to 1407
> BS10567.pep
MVSKNQFYQNWTMQSQQQHPHQMQQQFQQQQQPNLQHRNNQSNNNNCNNN
PRAAAAPYRKPFRSGKINSGPGGNGNGNRVNGNNQMMFSSSQMPSDPLYI
DFSSPPPGFKHNQVGSPKKKSMKGIKQQQHPSPNQQQPPSPNQQQHPSPN
QQQHPSPNQQQHPNSNQQQHLSPNQQQGKMNNQNNNHMNQSQQPFNNQMN
GSDWQRHPGNNPNQIRGGFNGFQRGPPPNRPPPRLMMGPPMGPMGPGPRG
PGPMGPGGPYPQMPFPPPVPGMRGPGPMGPMGGPPPPPPPLFMRRNGPGP
GPMMGVPPPMHMMGPRMPPRGIPPVGPYGPMNMNGGRIMKPNPKLIKQVV
KGKSSIKTLKNLINQYPIEKPWVTDEIRSEHDKKVDIENRLKGHKDDELF
AQYKGQRDKFVSLYEAAREEYLKQEAATVKAKDAKSDKDKNAISSQSAAP
KAGSAKDATIPNP*
BS10567.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:13:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)K10-PA | 463 | CG3218-PA | 1..463 | 1..463 | 2588 | 100 | Plus |
| CG10555-PB | 926 | CG10555-PB | 278..617 | 16..336 | 239 | 29 | Plus |
| CG10555-PA | 926 | CG10555-PA | 278..617 | 16..336 | 239 | 29 | Plus |
| ena-PE | 684 | CG15112-PE | 158..467 | 33..330 | 230 | 28.5 | Plus |
| ena-PC | 684 | CG15112-PC | 158..467 | 33..330 | 230 | 28.5 | Plus |
| ena-PE | 684 | CG15112-PE | 71..473 | 21..343 | 199 | 27.2 | Plus |
| CG10555-PB | 926 | CG10555-PB | 249..575 | 82..343 | 191 | 26.7 | Plus |
| CG10555-PA | 926 | CG10555-PA | 249..575 | 82..343 | 191 | 26.7 | Plus |
| ena-PE | 684 | CG15112-PE | 242..477 | 14..290 | 183 | 27.6 | Plus |
| CG10555-PB | 926 | CG10555-PB | 631..918 | 15..329 | 182 | 29 | Plus |
| CG10555-PA | 926 | CG10555-PA | 631..918 | 15..329 | 182 | 29 | Plus |
