Clone BS10615 Report

Search the DGRC for BS10615

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:106
Well:15
Vector:pDNR-Dual
Associated Gene/Transcriptbib-RA
Protein status:BS10615.pep: full length peptide match
Sequenced Size:2123

Clone Sequence Records

BS10615.3prime Sequence

827 bp (826 high quality bases) assembled on 2006-04-19

> BS10615.3prime
ATGGTCTAGAAAGCTTTCAGTTGGGCCTCAGCGGCAGCATTCCATAATGT
TGCTGCTGTTGTTGCATCATCATCTGTTGCTGCTGCTGCTGCTGTTGTTG
CTGCTGCTGCTGCTGTTGTTGTTGCTGCTGTTGGGCTGTCACCGCTGATC
CTTGCGAGGTTGTGTAGGTCACGGCGCACGCTGCCGGCTGGGATACCACA
ACTGGAGCACTAACTTTTCGCTCCGACTGCGTGCGAATGGGTTGCGGGTG
GGCTGCATTCGGCTGTGGGGGCGGGGCATACATCAGCATGGGCGGTGGCG
GAGGTGATGGCTCCACGCTGGGATGACGAGCTGGCGGCGTGACAGCCGAG
CCGTGATATGAGCCATAGGAGCTGTCGTCCGACTGCGCCGACTGTCCGCG
ATTCCTTGGTCCCGTCACGCCGTACATTTGCTGCGGGTCACGTCGGTCAT
ACTTGTGATTTCCGTCCATCGGCGTCGGATTTGTGCGTGTGCCGTAGACT
GGCTGGAAGCCCTGCGGCTGCTGCTGAGGATCGGACATCATCTGTGGCGG
AGGCTGCATCTGTTGCTGCTGCACTCCCATGTTGGGCTGTTGTTGCTGAA
GCTGCTGCTGCTGCTGCTGTTGTTGTTGCTGCTGGATTGGCTGCTGCTGT
CCGCGCATGGAGCCCCTCATTCCGTAGATGCTCTCGCTGCGCTGCTGCAT
CTGATTCTGGACATTTTGGTTCTGTAAATGGGAAGATTGAGGTGCGGGTG
CCACTTGTTGCTGTTGCTGTTGTTGCTGTTGCTGCTGCTGCTGGGTGCGC
ATGGGATAAAGACTCTGGGCGGGCACC

BS10615.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:52:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG4722-PA 2091 bib-RA 1281..2091 827..17 4055 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:34:01
Subject Length Description Subject Range Query Range Score Percent Strand
bib-RB 3276 CG4722-RB 1586..2400 827..13 4075 100 Minus
bib-RA 3276 CG4722-RA 1586..2400 827..13 4075 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:33:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9993848..9994662 827..13 4075 100 Minus
Blast to na_te.dros performed 2015-02-10 22:33:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2512 724..513 230 61 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2316..2419 649..543 230 71 Minus

BS10615.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:44:59 Download gff for BS10615.3prime
Subject Subject Range Query Range Percent Splice Strand
bib-PA 1281..2091 17..827 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:07:41 Download gff for BS10615.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4722-PA 1281..2091 17..827 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:56:57 Download gff for BS10615.3prime
Subject Subject Range Query Range Percent Splice Strand
bib-RA 1586..2404 8..827 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:03:05 Download gff for BS10615.3prime
Subject Subject Range Query Range Percent Splice Strand
bib-RA 1586..2404 8..827 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:03:05 Download gff for BS10615.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 9993848..9994666 8..827 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:56:57 Download gff for BS10615.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9993848..9994666 8..827 99   Minus

BS10615.5prime Sequence

872 bp (852 high quality bases) assembled on 2006-04-19

> BS10615.5prime
GAAGTTATCAGTCGACATGGCCGACGAAAGTCTGCACACCGTGCCCCTGG
AGCACAACATAGACTACCACATCGTGACGCTATTCGAGCGCCTGGAGGCG
ATGCGTAAGGACTCGCACGGCGGTGGCCACGGGGTCAACAATCGCCTGTC
CAGCACCCTGCAGGCTCCCAAGCGGAGCATGCAGGCTGAGATTCGCACGC
TGGAGTTTTGGAGATCCATCATCAGCGAGTGTCTGGCCTCCTTCATGTAC
GTGTTCATCGTCTGCGGTGCCGCCGCTGGCGTCGGAGTGGGGGCCAGTGT
GTCGTCCGTGCTTTTGGCCACGGCTCTGGCCTCCGGCCTGGCGATGGCTA
CACTGACGCAGTGCTTCCTCCACATCTCGGGCGCCCACATCAATCCCGCC
GTAACCCTGGCTCTATGCGTAGTGCGATCCATATCTCCGATCCGGGCTGC
CATGTACATAACCGCACAATGTGGCGGAGGAATCGCCGGAGCTGCTCTGC
TTTATGGCGTAACTGTGCCTGGTTACCAGGGGAATCTGCAGGCCGCCATC
TCACATAGCGCTGCTCTGGCCGCCTGGGAAAGATTCGGTGTGGAATTCAT
CCTCACCTTTCTGGTGGTTCTGTGCTATTTCGTATCCACGGATCCCATGA
AGAAGTTCATGGGCAATTCGGCCGCCTCGATTGGATGTGCTTACAGCGCC
TGCTGCTTTGTGTCGATGCCGTACCTGAATCCAGCCCGCTCCCTGGGTCC
TTCGTTTGTGCTTAACAAATGGGACAGCCATTGGGTGTACTGGTTCGGAC
CACTGGTGGGCGGCATGGCCTCTGGCCTGGTGTACGAGTACATCTTCAAC
TCGCGCAACCGCAACCTGCGCC

BS10615.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:52:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG4722-PA 2091 bib-RA 1..856 17..872 4280 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 13:15:57
Subject Length Description Subject Range Query Range Score Percent Strand
bib-RB 3276 CG4722-RB 302..1161 13..872 4300 100 Plus
bib-RA 3276 CG4722-RA 302..1161 13..872 4300 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 13:15:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9992254..9992462 507..715 1045 100 Plus
2L 23513712 2L 9984946..9985146 13..213 1005 100 Plus
2L 23513712 2L 9986787..9986956 212..381 850 100 Plus
2L 23513712 2L 9993266..9993423 715..872 790 100 Plus
2L 23513712 2L 9987600..9987727 380..507 640 100 Plus
Blast to na_te.dros performed on 2015-02-02 13:15:54 has no hits.

BS10615.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:45:00 Download gff for BS10615.5prime
Subject Subject Range Query Range Percent Splice Strand
bib-PA 1..856 17..872 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:07:43 Download gff for BS10615.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4722-PA 1..856 17..872 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:08:11 Download gff for BS10615.5prime
Subject Subject Range Query Range Percent Splice Strand
bib-RA 294..1161 5..872 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:47:16 Download gff for BS10615.5prime
Subject Subject Range Query Range Percent Splice Strand
bib-RA 294..1161 5..872 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:47:16 Download gff for BS10615.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9984938..9985146 5..213 98 -> Plus
2L 9986789..9986955 214..380 100 -> Plus
2L 9987601..9987727 381..507 100 -> Plus
2L 9992255..9992462 508..715 100 -> Plus
2L 9993267..9993423 716..872 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:08:11 Download gff for BS10615.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9984938..9985146 5..213 98 -> Plus
arm_2L 9986789..9986955 214..380 100 -> Plus
arm_2L 9987601..9987727 381..507 100 -> Plus
arm_2L 9992255..9992462 508..715 100 -> Plus
arm_2L 9993267..9993423 716..872 100   Plus

BS10615.complete Sequence

2123 bp assembled on 2008-08-15

GenBank Submission: KX805030

> BS10615.complete
GAAGTTATCAGTCGACATGGCCGACGAAAGTCTGCACACCGTGCCCCTGG
AGCACAACATAGACTACCACATCGTGACGCTATTCGAGCGCCTGGAGGCG
ATGCGTAAGGACTCGCACGGCGGTGGCCACGGGGTCAACAATCGCCTGTC
CAGCACCCTGCAGGCTCCCAAGCGGAGCATGCAGGCTGAGATTCGCACGC
TGGAGTTTTGGAGATCCATCATCAGCGAGTGTCTGGCCTCCTTCATGTAC
GTGTTCATCGTCTGCGGTGCCGCCGCTGGCGTCGGAGTGGGGGCCAGTGT
GTCGTCCGTGCTTTTGGCCACGGCTCTGGCCTCCGGCCTGGCGATGGCTA
CACTGACGCAGTGCTTCCTCCACATCTCGGGCGCCCACATCAATCCCGCC
GTAACCCTGGCTCTATGCGTAGTGCGATCCATATCTCCGATCCGGGCTGC
CATGTACATAACCGCACAATGTGGCGGAGGAATCGCCGGAGCTGCTCTGC
TTTATGGCGTAACTGTGCCTGGTTACCAGGGGAATCTGCAGGCCGCCATC
TCACATAGCGCTGCTCTGGCCGCCTGGGAAAGATTCGGTGTGGAATTCAT
CCTCACCTTTCTGGTGGTTCTGTGCTATTTCGTATCCACGGATCCCATGA
AGAAGTTCATGGGCAATTCGGCCGCCTCGATTGGATGTGCTTACAGCGCC
TGCTGCTTTGTGTCGATGCCGTACCTGAATCCAGCCCGCTCCCTGGGTCC
TTCGTTTGTGCTTAACAAATGGGACAGCCATTGGGTGTACTGGTTCGGAC
CACTGGTGGGCGGCATGGCCTCTGGCCTGGTGTACGAGTACATCTTCAAC
TCGCGCAACCGCAACCTGCGCCACAACAAGGGCAGCATCGACAACGATTC
CAGTTCGATTCACTCGGAGGACGAACTGAACTACGACATGGATATGGAGA
AGCCCAACAAGTATCAGCAGTCGCAGGGCACCTACCCGCGTGGCCAGTCC
AATGGCAATGGCGGAGGACAGGCGGCCGGAAATGGTCAGCACCAAGCTGC
CAACATGGGCCAGATGCCGGGCGTAGTGGCCAATGCCGGTCAGGGCAATT
ACTGCCAGAATCTGTACACTGCTCCGCCGCTCTCCTCGAAGTACGATCAG
CAGCAGGAACCTCTGTACGGTGGAACCCGCTCACTGTACTGCCGTTCGCC
CACTCTGACCAGAAGCAACCTGAATCGCTCGCAATCTGTGTACGCCAAGA
GCAACACGGCCATCAATCGAGACATTGTGCCGCGTCCAGGTCCTCTGGTG
CCCGCCCAGAGTCTTTATCCCATGCGCACCCAGCAGCAGCAGCAACAGCA
ACAACAGCAACAGCAACAAGTGGCACCCGCACCTCAATCTTCCCATTTAC
AGAACCAAAATGTCCAGAATCAGATGCAGCAGCGCAGCGAGAGCATCTAC
GGAATGAGGGGCTCCATGCGCGGACAGCAGCAGCCAATCCAGCAGCAACA
ACAACAGCAGCAGCAGCAGCAGCTTCAGCAACAACAGCCCAACATGGGAG
TGCAGCAGCAACAGATGCAGCCTCCGCCACAGATGATGTCCGATCCTCAG
CAGCAGCCGCAGGGCTTCCAGCCAGTCTACGGCACACGCACAAATCCGAC
GCCGATGGACGGAAATCACAAGTATGACCGACGTGACCCGCAGCAAATGT
ACGGCGTGACGGGACCAAGGAATCGCGGACAGTCGGCGCAGTCGGACGAC
AGCTCCTATGGCTCATATCACGGCTCGGCTGTCACGCCGCCAGCTCGTCA
TCCCAGCGTGGAGCCATCACCTCCGCCACCGCCCATGCTGATGTATGCCC
CGCCCCCACAGCCGAATGCAGCCCACCCGCAACCCATTCGCACGCAGTCG
GAGCGAAAAGTTAGTGCTCCAGTTGTGGTATCCCAGCCGGCAGCGTGCGC
CGTGACCTACACAACCTCGCAAGGATCAGCGGTGACAGCCCAACAGCAGC
AACAACAACAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAG
ATGATGATGCAACAACAGCAGCAACATTATGGAATGCTGCCGCTGAGGCC
CAACTGAAAGCTTTCTAGACCAT

BS10615.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:51:06
Subject Length Description Subject Range Query Range Score Percent Strand
bib-RB 2214 CG4722-PB 1..2095 17..2111 10475 100 Plus
bib-RA 2091 CG4722-PA 1..2091 17..2107 10455 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:51:08
Subject Length Description Subject Range Query Range Score Percent Strand
bib-RB 3276 CG4722-RB 302..2400 13..2111 10495 100 Plus
bib-RA 3276 CG4722-RA 302..2400 13..2111 10495 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:51:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9993266..9994662 715..2111 6985 100 Plus
2L 23513712 2L 9992254..9992462 507..715 1045 100 Plus
2L 23513712 2L 9984946..9985146 13..213 1005 100 Plus
2L 23513712 2L 9986787..9986956 212..381 850 100 Plus
2L 23513712 2L 9987600..9987727 380..507 640 100 Plus
Blast to na_te.dros performed 2014-11-27 23:51:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2512 1400..1611 230 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2316..2419 1475..1581 230 71 Plus

BS10615.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:24:26 Download gff for BS10615.complete
Subject Subject Range Query Range Percent Splice Strand
bib-RA 292..2402 5..2116 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:39:48 Download gff for BS10615.complete
Subject Subject Range Query Range Percent Splice Strand
bib-RA 306..2395 17..2106 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:10:26 Download gff for BS10615.complete
Subject Subject Range Query Range Percent Splice Strand
bib-RA 304..2393 17..2106 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:09:40 Download gff for BS10615.complete
Subject Subject Range Query Range Percent Splice Strand
bib-RA 306..2395 17..2106 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:09:40 Download gff for BS10615.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9984950..9985146 17..213 100 -> Plus
2L 9986789..9986955 214..380 100 -> Plus
2L 9987601..9987727 381..507 100 -> Plus
2L 9992255..9992462 508..715 100 -> Plus
2L 9993267..9994657 716..2106 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:39:48 Download gff for BS10615.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9984950..9985146 17..213 100 -> Plus
arm_2L 9986789..9986955 214..380 100 -> Plus
arm_2L 9987601..9987727 381..507 100 -> Plus
arm_2L 9992255..9992462 508..715 100 -> Plus
arm_2L 9993267..9994657 716..2106 100   Plus

BS10615.pep Sequence

Translation from 16 to 2106

> BS10615.pep
MADESLHTVPLEHNIDYHIVTLFERLEAMRKDSHGGGHGVNNRLSSTLQA
PKRSMQAEIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSVLL
ATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITA
QCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLV
VLCYFVSTDPMKKFMGNSAASIGCAYSACCFVSMPYLNPARSLGPSFVLN
KWDSHWVYWFGPLVGGMASGLVYEYIFNSRNRNLRHNKGSIDNDSSSIHS
EDELNYDMDMEKPNKYQQSQGTYPRGQSNGNGGGQAAGNGQHQAANMGQM
PGVVANAGQGNYCQNLYTAPPLSSKYDQQQEPLYGGTRSLYCRSPTLTRS
NLNRSQSVYAKSNTAINRDIVPRPGPLVPAQSLYPMRTQQQQQQQQQQQQ
QVAPAPQSSHLQNQNVQNQMQQRSESIYGMRGSMRGQQQPIQQQQQQQQQ
QQLQQQQPNMGVQQQQMQPPPQMMSDPQQQPQGFQPVYGTRTNPTPMDGN
HKYDRRDPQQMYGVTGPRNRGQSAQSDDSSYGSYHGSAVTPPARHPSVEP
SPPPPPMLMYAPPPQPNAAHPQPIRTQSERKVSAPVVVSQPAACAVTYTT
SQGSAVTAQQQQQQQQQQQQQQQQQQQQMMMQQQQQHYGMLPLRPN*

BS10615.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:50:28
Subject Length Description Subject Range Query Range Score Percent Strand
bib-PB 737 CG4722-PB 1..696 1..696 3677 100 Plus
bib-PA 696 CG4722-PA 1..696 1..696 3677 100 Plus
Drip-PE 239 CG9023-PE 15..236 63..295 365 36.1 Plus
Drip-PD 242 CG9023-PD 18..239 63..295 365 36.1 Plus
Drip-PC 243 CG9023-PC 19..240 63..295 365 36.1 Plus