Clone Sequence Records
BS10653.complete Sequence
2603 bp assembled on 2009-12-07
GenBank Submission: KX806301
> BS10653.complete
GAAGTTATCAGTCGACATGCGTGTAATTGCGCCGCGTAGATCGTCAACGT
CAGCGGCGGGCAGCGGCAGTCTCTACGGTACATCGGCGGTCGGCACCTCC
AGCGGCAGCACCACCAGCAGCAACTCCACCAGCGGCAGTCACCACATCAG
CATCACCGGAAGCGGTGCGGTGGATCGGACCAGCGGAGGCGCCGCCACGA
ACGGTTACTCCCGCATATCGAGCAGCTACGACCGCGGCAGCAGTCTGTCC
AAGTGGCTGCCCACCTCGTCCGGCGGCTCCAACTCGTCGGGCTACGGCAG
CAGCTACTATCCCACCTCTTACTCAACGTTCTCCGCCAACAGCGGCTCCT
CAAGCGCCTCGTATGCGCCGCGCTCCAGTGTGCAGAGGAGCAGCGTTGGT
ACCACGTCGTCAACGTCGTATATGAGCGGCGGATCCGGCAGCAGCTCGTC
CGCCTACCGCACCTCCTCGTATCTGAGCGGGTCCAGCTATGATTCACCTA
CGTACAGCCGATACGGATTACCGCGCAAAGCGGCGTCCAGAATTACCACC
AACGGGGACAGCTTGAGCGGATCGGCCAAGAGGGAGGACTACGGTCTACG
GCGTGGTCATGATACCGTCAAGAAACCACCGATCAGCGGAGGGAGTGTTG
GCCACAACTGCAGCAGCAGCACTGCGAGTAGAGACACCAAAGCCGTCGAT
GGCAACAAACGGCTGTCCAGTTCATCCTCATCTCCATCGCTGGCCCGTTT
GGTGGCCACCTCCGGACTGGACATTTATGAAAAGTACAGTCCGGCCAACT
ATAAACCCAACTGTGAACTGTCACGTTCCAGGTCGGGGCATTCTGAGACG
GATCTAGAAAACGGAAGCAACAAGGAGACGACGCCCACCTGTACGGTGAC
CCTGGATAGGCCATGGAGCAGCACCAGTCGATACAGCCGCCTGTACAGGA
ACAGCAGCGATGCAGGAGGGGACTCCTCGGCTTCCGCGAAAAAATTGGGC
TCCGGCAAGTACTCGATTAGCAGCAGCAGTAGCAGTGGCGATGTGCCCAC
GGCCACCTTTACACTCCGAAGCAAACGCACGCGGCGCAATCAAGCGGAGG
AGGTACCCACGAGCACGGGAGTAGAGCAGGCAGGCCCAGCAGCTCCACCA
CCGACGCCACCACCACCGCCACCACCTCCACCACCCACAAATGGCCACAA
GCCGGCTGAATCGAATGGCGGACTGGAAGCCAAATTAAACGGTCTATCTC
TGCTCTCAACTTCACCCAAAAGAAATGCCATTTACGAACGAAATCAGGAG
ACCGCCGATGATGCAGGTGTTAGCCAGGATACTGCGGACAATGCCGATGT
GAGCACCTCGGCCACATTTAAGCTAAACGACAGCAGCAAGACGTTGGCGA
GAAGTGGCACTGGGAGTAGCAGCACTGCCCGGAGCGTCCTGCCGCCCATG
ACGCCTACGTCAAGTCGGTACTGGGATCGGGACAGCGGCACCAGCCGCAG
CAGCATAGGCACCTCCTCCGCACTGAACTCGTCATCCCTGAAACATAACT
CGGATGATGGCTACAAGACCGCCTCCTCTTCGCGGGATGAGAAGTCCGAA
GGTCTGTGCGGTCTGCGAAACATTGGGAACACTTGCTTTATGAACTCGGT
CATCCAGTGCCTGAGTCACACTCAAGAGCTGACCCGCTTCTTGCGGTCGC
ACCACGGCTCTCGTTCGTTATCCACCAAGGATCAGCAGATACTCCACGAA
TTTGCCAAACTCATTCAGGAGATGTGGACCGCTAACGTGCACACGGTGAC
GCCCATGGAGCTAAAGAGGGCGTTCTCGACCAAACATCGCATGTACAGCG
ACTACAACCAACAGGATGCGCAGGAGTTCCTGCGTTTTTTCCTTGACTCG
CTGCATTCGGCCCTCAATTCGGGCGTCAAGGGTGAGACGCTCAACATTGA
CGATAATCTCAGTGACAATAAGAAGGCGGACTTGACCTGGGAGTGGTATA
CGCGGCACGAGAACTCTCTGGTGCGCGACCTGTTTGTGGGTCAGCTCAAA
AGCACACTGAAGTGCACCACCTGCGGTAACACCAGCGTCACCTTTGATCC
GTTCTGGGATCTGAGTGTACCGTTGCCGTCTTCGTCCCGCTGCAAGCTAG
AAGCTTGCCTCGACCTCTTTATCCGCGAAGAGGTCCTTGACGGCGACGAA
ATGCCCACGTGCGCCAAGTGCAAGACACGGCGAAAATGCACCAAGAGCTT
CACCATTCAACGTTTCCCCAAATATCTTGTTATACACCTAAAACGCTTTT
CGGAGACACGCTGGAGCAAGCTGTCCAACATCGTTGAATTTCCCACATCA
GACAGCGAGCTGAACATGGGCTCCTATGGCGCCAACTCCAACTCGAATGT
GCATTACTCGCTCTATGCGATATCCAATCATATGGGGTCAACGGCTGGTG
GTCATTATGTTGCCCTTTGCAAGCATCCAGTTTCCCGCAAGTGGCACGAA
TTTAATGATAATATAGTCAGCGATGCCTTGTCCGAAAACCATCTCGTTTC
ATCCAGTGCCTATATTCTTTTCTACGAGCGTACGTAAAAGCTTTCTAGAC
CAT
BS10653.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:18:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14619-RA | 2571 | CG14619-PA | 1..2571 | 17..2587 | 12855 | 100 | Plus |
CG14619-RD | 2571 | CG14619-PD | 1..2571 | 17..2587 | 12855 | 100 | Plus |
CG14619-RE | 2571 | CG14619-PE | 1..2571 | 17..2587 | 12855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:18:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14619-RA | 3434 | CG14619-RA | 573..3143 | 17..2587 | 12855 | 100 | Plus |
CG14619-RD | 3247 | CG14619-RD | 386..2956 | 17..2587 | 12855 | 100 | Plus |
CG14619-RE | 3194 | CG14619-RE | 333..2903 | 17..2587 | 12855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:18:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 22462400..22463272 | 518..1390 | 4365 | 100 | Plus |
X | 23542271 | X | 22457760..22458260 | 17..517 | 2505 | 100 | Plus |
X | 23542271 | X | 22467294..22467618 | 1961..2285 | 1625 | 100 | Plus |
X | 23542271 | X | 22467018..22467232 | 1748..1962 | 1075 | 100 | Plus |
X | 23542271 | X | 22466163..22466377 | 1389..1603 | 1075 | 100 | Plus |
X | 23542271 | X | 22467716..22467866 | 2286..2436 | 755 | 100 | Plus |
X | 23542271 | X | 22466810..22466958 | 1600..1748 | 745 | 100 | Plus |
X | 23542271 | X | 22467921..22468000 | 2435..2514 | 400 | 100 | Plus |
X | 23542271 | X | 22468112..22468184 | 2515..2587 | 365 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:18:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 131..195 | 94..155 | 146 | 73.8 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9161..9225 | 94..155 | 146 | 73.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6856 | 113..243 | 139 | 59.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6838..6895 | 651..708 | 119 | 67.2 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7955..7986 | 106..137 | 115 | 84.4 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 9399..9430 | 106..137 | 115 | 84.4 | Plus |
BS10653.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:48:04 Download gff for
BS10653.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14619-RA | 573..3141 | 17..2585 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:03 Download gff for
BS10653.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14619-RE | 333..2901 | 17..2585 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:17:48 Download gff for
BS10653.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14619-RA | 573..3141 | 17..2585 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:08:33 Download gff for
BS10653.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14619-RE | 333..2901 | 17..2585 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:08:33 Download gff for
BS10653.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 22468112..22468182 | 2515..2585 | 100 | | Plus |
X | 22457760..22458260 | 17..517 | 100 | -> | Plus |
X | 22462400..22463272 | 518..1390 | 100 | -> | Plus |
X | 22466165..22466375 | 1391..1601 | 100 | -> | Plus |
X | 22466812..22466958 | 1602..1748 | 100 | -> | Plus |
X | 22467019..22467232 | 1749..1962 | 100 | -> | Plus |
X | 22467296..22467618 | 1963..2285 | 100 | -> | Plus |
X | 22467716..22467865 | 2286..2435 | 100 | -> | Plus |
X | 22467922..22468000 | 2436..2514 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:03 Download gff for
BS10653.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21869552..21869701 | 2286..2435 | 100 | -> | Plus |
arm_X | 21869758..21869836 | 2436..2514 | 100 | -> | Plus |
arm_X | 21869948..21870018 | 2515..2585 | 100 | | Plus |
arm_X | 21868001..21868211 | 1391..1601 | 100 | -> | Plus |
arm_X | 21868648..21868794 | 1602..1748 | 100 | -> | Plus |
arm_X | 21868855..21869068 | 1749..1962 | 100 | -> | Plus |
arm_X | 21869132..21869454 | 1963..2285 | 100 | -> | Plus |
arm_X | 21859596..21860096 | 17..517 | 100 | -> | Plus |
arm_X | 21864236..21865108 | 518..1390 | 100 | -> | Plus |
BS10653.3prime Sequence
902 bp (793 high quality bases) assembled on 2006-04-19
> BS10653.3prime
ATGGTCTAGAAAGCTTTTACGTACGCTCGTAGAAAAGAATATAGGCACTG
GATGAAACGAGATGGTTTTCGGACAAGGCATCGCTGACTATATTATCATT
AAATTCGTGCCACTTGCGGGAAACTGGATGCTTGCAAAGGGCAACATAAT
GACCACCAGCCGTTGACCCCATATGATTGGATATCGCATAGAGCGAGTAA
TGCACATTCGAGTTGGAGTTGGCGCCATAGGAGCCCATGTTCAGCTCGCT
GTCTGATGTGGGAAATTCAACGATGTTGGACAGCTTGCTCCAGCGTGTCT
CCGAAAAGCGTTTTAGGTGTATAACAAGATATTTGGGGAAACGTTGAATG
GTGAAGCTCTTGGTGCATTTTCGCCGTGTCTTGCACTTGGCGCACGTGGG
CATTTCGTCGCCGTCAAGGACCTCTTCGCGGATAAAGAGGTCGAGGCAAG
CTTCTAGCTTGCAGCGGGACGAAGACGGCAACGGTACACTCAGATCCCAG
AACGGATCAAAGGTGACGCTGGTGTTACCGCAGGTGGTGCACTTCAGTGT
GCTTTTGAGCTGACCCACAAACAGGTCGCGCACCAGAGAGTTCTCGTGCC
GCGTATACCACTCCCAGGTCAAGTCCGCCTTCTTATTGTCACTGAGATTA
TCGTCAATGTTGAGCGTCTCACCCTTGACGCCCGAATTGAGGGCCGAATG
CAGCGAGTCAAGGAAAAAACGCAGGAACTCCTGCGCATCCTGTTGGTTGT
AGTCGCTGTACATGCGATGTTTGGTCGAGAACGCCCTCTTTAGCTCCATG
GGCGTCACCGTGTGCACGTTAGCGGGCCACATCTCCTGAATGAGTTTGGC
AAATTCGTGGAGTATCTGCTGATCCTGGGGGGATAACGAACGAGAGCCGT
GG
BS10653.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:53:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14619-PE | 2571 | CG14619-RE | 1686..2571 | 902..17 | 4355 | 99.6 | Minus |
CG14619-PD | 2571 | CG14619-RD | 1686..2571 | 902..17 | 4355 | 99.6 | Minus |
CG14619-PA | 2571 | CG14619-RA | 1686..2571 | 902..17 | 4355 | 99.6 | Minus |
CG14619-PC | 2817 | CG14619-RC | 1932..2817 | 902..17 | 4355 | 99.6 | Minus |
CG14619-PB | 1014 | CG14619-RB | 129..1014 | 902..17 | 4355 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:47:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14619-RJ | 2560 | CG14619-RJ | 1384..2269 | 902..17 | 4385 | 99.7 | Minus |
CG14619-RI | 4341 | CG14619-RI | 3165..4050 | 902..17 | 4385 | 99.7 | Minus |
CG14619-RH | 3992 | CG14619-RH | 1145..2030 | 902..17 | 4385 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:47:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 22467294..22467618 | 643..319 | 1625 | 100 | Minus |
X | 23542271 | X | 22467018..22467232 | 856..642 | 1060 | 99.5 | Minus |
X | 23542271 | X | 22467716..22467866 | 318..168 | 755 | 100 | Minus |
X | 23542271 | X | 22467921..22468000 | 169..90 | 400 | 100 | Minus |
X | 23542271 | X | 22468112..22468184 | 89..17 | 365 | 100 | Minus |
X | 23542271 | X | 22466912..22466958 | 902..856 | 205 | 95.7 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:47:53 has no hits.
BS10653.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:46:06 Download gff for
BS10653.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14619-PB | 129..1014 | 17..902 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:09:10 Download gff for
BS10653.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14619-PB | 129..1014 | 17..902 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 02:04:52 Download gff for
BS10653.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14619-RH | 1145..2033 | 13..902 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:21:57 Download gff for
BS10653.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14619-RH | 1145..2033 | 13..902 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:21:57 Download gff for
BS10653.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 22467922..22468000 | 90..168 | 100 | -> | Minus |
X | 22468112..22468185 | 14..89 | 97 | -> | Minus |
X | 22466912..22466958 | 856..902 | 95 | -> | Minus |
X | 22467019..22467232 | 642..855 | 99 | -> | Minus |
X | 22467296..22467618 | 319..641 | 100 | -> | Minus |
X | 22467716..22467865 | 169..318 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 02:04:52 Download gff for
BS10653.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21868748..21868794 | 856..902 | 95 | -> | Minus |
arm_X | 21868855..21869068 | 642..855 | 99 | -> | Minus |
arm_X | 21869132..21869454 | 319..641 | 100 | -> | Minus |
arm_X | 21869552..21869701 | 169..318 | 100 | -> | Minus |
arm_X | 21869758..21869836 | 90..168 | 100 | -> | Minus |
arm_X | 21869948..21870021 | 14..89 | 97 | -> | Minus |
BS10653.5prime Sequence
846 bp (790 high quality bases) assembled on 2006-04-19
> BS10653.5prime
GAAGTTATCAGTCGACATGCGTGTAATTGCGCCGCGTAGATCGTCAACGT
CAGCGGCGGGCAGCGGCAGTCTCTACGGTACATCGGCGGTCGGCACCTCC
AGCGGCAGCACCACCAGCAGCAACTCCACCAGCGGCAGTCACCACATCAG
CATCACCGGAAGCGGTGCGGTGGATCGGACCAGCGGAGGCGCCGCCACGA
ACGGTTACTCCCGCATATCGAGCAGCTACGACCGCGGCAGCAGTCTGTCC
AAGTGGCTGCCCACCTCGTCCGGCGGCTCCAACTCGTCGGGCTACGGCAG
CAGCTACTATCCCACCTCTTACTCAACGTTCTCCGCCAACAGCGGCTCCT
CAAGCGCCTCGTATGCGCCGCGCTCCAGTGTGCAGAGGAGCAGCGTTGGT
ACCACGTCGTCAACGTCGTATATGAGCGGCGGATCCGGCAGCAGCTCGTC
CGCCTACCGCACCTCCTCGTATCTGAGCGGGTCCAGCTATGATTCACCTA
CGTACAGCCGATACGGATTACCGCGCAAAGCGGCGTCCAGAATTACCACC
AACGGGGACAGCTTGAGCGGATCGGCCAAGAGGGAGGACTACGGTCTACG
GCGTGGTCATGATACCGTCAAGAAACCACCGATCAGCGGAGGGAGTGTTG
GCCACAACTGCAGCAGCAGCACTGCGAGTAGAGACACCAAAGCCGTCGAT
GGCAACAAACGGCTGTCCAGTTCATCCTCATCTCCATCGCTGGCCCGTTT
GGTGGCCACCTCCGGACTGGACATTTATGAAAAGTACAGTCCGGCCAACT
ATAAACCCCACTGTGAACTGTCACGTTCCAGGTCGGGGCATTCTGA
BS10653.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:53:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14619-PE | 2571 | CG14619-RE | 1..830 | 17..846 | 4125 | 99.8 | Plus |
CG14619-PD | 2571 | CG14619-RD | 1..830 | 17..846 | 4125 | 99.8 | Plus |
CG14619-PA | 2571 | CG14619-RA | 1..830 | 17..846 | 4125 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:45:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14619-RG | 5178 | CG14619-RG | 333..1162 | 17..846 | 4135 | 99.9 | Plus |
CG14619-RA | 3434 | CG14619-RA | 573..1402 | 17..846 | 4135 | 99.9 | Plus |
CG14619-RD | 3247 | CG14619-RD | 386..1215 | 17..846 | 4135 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:45:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 22457760..22458260 | 17..517 | 2505 | 100 | Plus |
X | 23542271 | X | 22462400..22462728 | 518..846 | 1630 | 99.7 | Plus |
Blast to na_te.dros performed 2015-02-11 09:45:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 131..195 | 94..155 | 146 | 73.8 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9161..9225 | 94..155 | 146 | 73.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6856 | 113..243 | 139 | 59.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6838..6895 | 651..708 | 119 | 67.2 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7955..7986 | 106..137 | 115 | 84.4 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 9399..9430 | 106..137 | 115 | 84.4 | Plus |
BS10653.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:46:07 Download gff for
BS10653.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14619-PE | 1..829 | 17..845 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:09:12 Download gff for
BS10653.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14619-PA | 1..829 | 17..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:55:11 Download gff for
BS10653.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14619-RD | 379..1214 | 9..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:02:20 Download gff for
BS10653.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14619-RD | 379..1214 | 9..845 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:02:20 Download gff for
BS10653.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 22457753..22458260 | 9..517 | 99 | -> | Plus |
X | 22462400..22462727 | 518..845 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:55:11 Download gff for
BS10653.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21859589..21860096 | 9..517 | 99 | -> | Plus |
arm_X | 21864236..21864563 | 518..845 | 99 | | Plus |
BS10653.pep Sequence
Translation from 16 to 2586
> BS10653.pep
MRVIAPRRSSTSAAGSGSLYGTSAVGTSSGSTTSSNSTSGSHHISITGSG
AVDRTSGGAATNGYSRISSSYDRGSSLSKWLPTSSGGSNSSGYGSSYYPT
SYSTFSANSGSSSASYAPRSSVQRSSVGTTSSTSYMSGGSGSSSSAYRTS
SYLSGSSYDSPTYSRYGLPRKAASRITTNGDSLSGSAKREDYGLRRGHDT
VKKPPISGGSVGHNCSSSTASRDTKAVDGNKRLSSSSSSPSLARLVATSG
LDIYEKYSPANYKPNCELSRSRSGHSETDLENGSNKETTPTCTVTLDRPW
SSTSRYSRLYRNSSDAGGDSSASAKKLGSGKYSISSSSSSGDVPTATFTL
RSKRTRRNQAEEVPTSTGVEQAGPAAPPPTPPPPPPPPPPTNGHKPAESN
GGLEAKLNGLSLLSTSPKRNAIYERNQETADDAGVSQDTADNADVSTSAT
FKLNDSSKTLARSGTGSSSTARSVLPPMTPTSSRYWDRDSGTSRSSIGTS
SALNSSSLKHNSDDGYKTASSSRDEKSEGLCGLRNIGNTCFMNSVIQCLS
HTQELTRFLRSHHGSRSLSTKDQQILHEFAKLIQEMWTANVHTVTPMELK
RAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSALNSGVKGETLNIDDNLSD
NKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLS
VPLPSSSRCKLEACLDLFIREEVLDGDEMPTCAKCKTRRKCTKSFTIQRF
PKYLVIHLKRFSETRWSKLSNIVEFPTSDSELNMGSYGANSNSNVHYSLY
AISNHMGSTAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYI
LFYERT*
BS10653.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:52:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14619-PA | 856 | CG14619-PA | 1..856 | 1..856 | 4439 | 100 | Plus |
CG14619-PD | 856 | CG14619-PD | 1..856 | 1..856 | 4439 | 100 | Plus |
CG14619-PE | 856 | CG14619-PE | 1..856 | 1..856 | 4439 | 100 | Plus |
CG14619-PI | 950 | CG14619-PI | 173..950 | 9..856 | 2135 | 56.3 | Plus |
CG14619-PH | 565 | CG14619-PH | 168..565 | 459..856 | 2105 | 100 | Plus |
CG14619-PH | 565 | CG14619-PH | 1..236 | 1..241 | 844 | 76 | Plus |