Clone Sequence Records
BS10658.3prime Sequence
906 bp (835 high quality bases) assembled on 2006-04-19
> BS10658.3prime
ATGGTCTAGAAAGCTTTTATTCGACGGTGACAATGCGGATGGTGTTGGTG
AAGCCGGAGCCCTGCTTCCAGCCGGTAACCACCACGACGGAATCGCCGGT
CTTGATGAAGCCGTTCTTCTTTCCGACCTGCAGACCGAACTGCACGCGCA
CGTCCACGTCCTTCAGCCAGTCACCAAGACCGGGCTCCTTGTAGATGAGT
GGCACCAGTCCACGGTAGAGATGGGCCTGTCGGGCGGTCTGCGCGAAACG
GGTGACCGCGATGATGGGGCAGCGTGGGCGGTACTTGCTCACCTGGAAGG
CCGACTTGCCGCTGGTGGTGATCACCACGATGGCGGAGGCCTTGGCCTTG
GTGGCAGCCTCAACGGCAGCGATGGCAGCCGCGTGAGAGGCATCGATGGT
ACCAGCGCCGCGAACCAAGTCGTTAAAGAGGTTCTGGTGCCAGAGGGCAG
CCTCGGCCTCCTTGCAGGTCTTGGCCATGGTCAGGACGCACTCCAGCGGG
TACTCGCCCTTGGCGGTCTCACCAGACAACATGACGCAATCAGCACCATC
GAGCACAGCGTTGGCCACATCAGAGATCTCAGCGCGAGTGGGACGTGGCT
TCTTCACCATTGACTCCAACATCTGAGTGGCGCAGATCACAGGCTTGCCA
GCCTTGTTGCAGCGGGCAATCATGGCCTTCTGGGCGAGGAACACCTTCTC
GGCGGGAATCTCAATACCCAGATCTCCACGGGCCACCATAATGCCATCAC
CGGCCTCGATGATCTCGTCCAGGTTGTGCATGCCCTGCTGGTTCTCGATC
TTGGAAATGATCTTGATGTTCTTGCCCTTCTCGCCAAGAACCTTACGGAT
CTCGGTCAAAGCAGCGGCGTTGCGGATGAACGAAGCAAAGATCATGTCCA
CTTTCT
BS10658.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:53:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7070-PB | 1539 | PyK-RB | 653..1539 | 903..17 | 4435 | 100 | Minus |
CG7070-PA | 1602 | PyK-RA | 716..1602 | 903..17 | 4435 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:36:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PyK-RA | 2109 | CG7070-RA | 958..1845 | 903..16 | 4440 | 100 | Minus |
PyK-RB | 1958 | CG7070-RB | 807..1694 | 903..16 | 4440 | 100 | Minus |
CG7069-RA | 2693 | CG7069-RA | 1011..1294 | 748..465 | 490 | 78.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:36:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22371451..22372167 | 903..187 | 3585 | 100 | Minus |
3R | 32079331 | 3R | 22372225..22372382 | 187..30 | 790 | 100 | Minus |
3R | 32079331 | 3R | 22373897..22374180 | 748..465 | 475 | 77.8 | Minus |
3R | 32079331 | 3R | 14753414..14753603 | 472..661 | 290 | 76.8 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:36:23 has no hits.
BS10658.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:46:13 Download gff for
BS10658.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-PA | 713..1602 | 17..906 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:09:19 Download gff for
BS10658.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7070-PA | 713..1602 | 17..906 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:57:10 Download gff for
BS10658.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-RB | 804..1698 | 8..906 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:03:31 Download gff for
BS10658.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-RB | 804..1698 | 8..906 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:03:31 Download gff for
BS10658.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22371448..22372167 | 187..906 | 99 | -> | Minus |
3R | 22372226..22372382 | 30..186 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:57:10 Download gff for
BS10658.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18197170..18197889 | 187..906 | 99 | -> | Minus |
arm_3R | 18197948..18198104 | 30..186 | 100 | -> | Minus |
BS10658.5prime Sequence
872 bp (859 high quality bases) assembled on 2006-04-19
> BS10658.5prime
GAAGTTATCAGTCGACATGGCCGCAGGAGCTGATACCCAACTGGAGCACA
TGTGCCGTCTGCAGTTCGACTCGCCAGTGCCCCATGTGCGTCTGTCCGGA
ATCGTGTGCACCATCGGACCTGCCTCCAGCAGCGTGGAGATGCTGGAGAA
GATGATGGCCACCGGCATGAACATCGCGCGCATGAACTTCTCTCACGGAT
CGCACGAGTACCATGCCGCCACCGTGGCCAATGTGCGCCAGGCGGTGAAG
AACTACTCGGCCAAGCTGGGCTACGAACACCCCGTGGCCATTGCCCTGGA
CACCAAGGGGCCCGAGATCCGTACCGGTCTGATCGGAGGCAGCGGCACCG
CCGAGATTGAGCTGAAGAAGGGCGAGAAGATCAAGCTGACCACCAACAAG
GAATTCCTGGAGAAGGGCTCTCTGGAGATTGTGTACGTGGACTACGAGAA
CATTGTCAATGTGGTGAAGCCCGGCAACCGGGTGTTCGTCGATGACGGTC
TGATCTCACTGATTGTCCGCGAGGTAGGCAAGGATTCCCTCACCTGCGAG
GTGGAGAACGGCGGCTCTCTGGGTTCCCGCAAGGGTGTGAACCTGCCAGG
CGTGCCCGTCGATCTGCCTGCCGTCTCCGAGAAGGATAAGAGCGATCTGC
TGTTCGGTGTGGAGCAGGAAGTGGACATGATCTTTGCTTCGTTCATCCGC
AACGCCGCTGCTTTGACCGAGATCCGTAAGGTTCTTGGCGAGAAGGGCAA
GAACATCAAGATCATTTCCAAGATCGAGAACCAGCAGGGCATGCACAACC
TGGACGAGATCATCGAGGCCGGTGATGGCATTATGGTGGCCCGTGGAGAT
CTGGGTATTGAGATTCCCGCCG
BS10658.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:53:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7070-PA | 1602 | PyK-RA | 62..919 | 15..872 | 4290 | 100 | Plus |
CG7070-PB | 1539 | PyK-RB | 1..856 | 17..872 | 4280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:00:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PyK-RA | 2109 | CG7070-RA | 304..1161 | 15..872 | 4290 | 100 | Plus |
PyK-RB | 1958 | CG7070-RB | 153..1010 | 15..872 | 4290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 05:00:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22370797..22371654 | 15..872 | 4290 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 05:00:29 has no hits.
BS10658.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:46:14 Download gff for
BS10658.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-PA | 58..919 | 9..872 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:09:20 Download gff for
BS10658.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7070-PA | 58..919 | 9..872 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:48:34 Download gff for
BS10658.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-RB | 149..1010 | 9..872 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 07:26:13 Download gff for
BS10658.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-RB | 149..1010 | 9..872 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 07:26:13 Download gff for
BS10658.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22370793..22371654 | 9..872 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:48:34 Download gff for
BS10658.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18196515..18197376 | 9..872 | 99 | | Plus |
BS10658.complete Sequence
1571 bp assembled on 2006-11-01
GenBank Submission: FJ636707
> BS10658.complete
GAAGTTATCAGTCGACATGGCCGCAGGAGCTGATACCCAACTGGAGCACA
TGTGCCGTCTGCAGTTCGACTCGCCAGTGCCCCATGTGCGTCTGTCCGGA
ATCGTGTGCACCATCGGACCTGCCTCCAGCAGCGTGGAGATGCTGGAGAA
GATGATGGCCACCGGCATGAACATCGCGCGCATGAACTTCTCTCACGGAT
CGCACGAGTACCATGCCGCCACCGTGGCCAATGTGCGCCAGGCGGTGAAG
AACTACTCGGCCAAGCTGGGCTACGAACACCCCGTGGCCATTGCCCTGGA
CACCAAGGGGCCCGAGATCCGTACCGGTCTGATCGGAGGCAGCGGCACCG
CCGAGATTGAGCTGAAGAAGGGCGAGAAGATCAAGCTGACCACCAACAAG
GAATTCCTGGAGAAGGGCTCTCTGGAGATTGTGTACGTGGACTACGAGAA
CATTGTCAATGTGGTGAAGCCCGGCAACCGGGTGTTCGTCGATGACGGTC
TGATCTCACTGATTGTCCGCGAGGTAGGCAAGGATTCCCTCACCTGCGAG
GTGGAGAACGGCGGCTCTCTGGGTTCCCGCAAGGGTGTGAACCTGCCAGG
CGTGCCCGTCGATCTGCCTGCCGTCTCCGAGAAGGATAAGAGCGATCTGC
TGTTCGGTGTGGAGCAGGAAGTGGACATGATCTTTGCTTCGTTCATCCGC
AACGCCGCTGCTTTGACCGAGATCCGTAAGGTTCTTGGCGAGAAGGGCAA
GAACATCAAGATCATTTCCAAGATCGAGAACCAGCAGGGCATGCACAACC
TGGACGAGATCATCGAGGCCGGTGATGGCATTATGGTGGCCCGTGGAGAT
CTGGGTATTGAGATTCCCGCCGAGAAGGTGTTCCTCGCCCAGAAGGCCAT
GATTGCCCGCTGCAACAAGGCTGGCAAGCCTGTGATCTGCGCCACTCAGA
TGTTGGAGTCAATGGTGAAGAAGCCACGTCCCACTCGCGCTGAGATCTCT
GATGTGGCCAACGCTGTGCTCGATGGTGCTGATTGCGTCATGTTGTCTGG
TGAGACCGCCAAGGGCGAGTACCCGCTGGAGTGCGTCCTGACCATGGCCA
AGACCTGCAAGGAGGCCGAGGCTGCCCTCTGGCACCAGAACCTCTTTAAC
GACTTGGTTCGCGGCGCTGGTACCATCGATGCCTCTCACGCGGCTGCCAT
CGCTGCCGTTGAGGCTGCCACCAAGGCCAAGGCCTCCGCCATCGTGGTGA
TCACCACCAGCGGCAAGTCGGCCTTCCAGGTGAGCAAGTACCGCCCACGC
TGCCCCATCATCGCGGTCACCCGTTTCGCGCAGACCGCCCGACAGGCCCA
TCTCTACCGTGGACTGGTGCCACTCATCTACAAGGAGCCCGGTCTTGGTG
ACTGGCTGAAGGACGTGGACGTGCGCGTGCAGTTCGGTCTGCAGGTCGGA
AAGAAGAACGGCTTCATCAAGACCGGCGATTCCGTCGTGGTGGTTACCGG
CTGGAAGCAGGGCTCCGGCTTCACCAACACCATCCGCATTGTCACCGTCG
AATAAAAGCTTTCTAGACCAT
BS10658.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:48:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PyK-RA | 1602 | CG7070-PA | 62..1602 | 15..1555 | 7705 | 100 | Plus |
PyK-RB | 1539 | CG7070-PB | 1..1539 | 17..1555 | 7695 | 100 | Plus |
CG7069-RA | 2235 | CG7069-PA | 386..944 | 549..1107 | 530 | 73 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:48:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PyK-RA | 2109 | CG7070-RA | 304..1845 | 15..1556 | 7710 | 100 | Plus |
PyK-RB | 1958 | CG7070-RB | 153..1694 | 15..1556 | 7710 | 100 | Plus |
CG7069-RA | 2693 | CG7069-RA | 736..1294 | 549..1107 | 530 | 73 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:48:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22370797..22372167 | 15..1385 | 6855 | 100 | Plus |
3R | 32079331 | 3R | 22372225..22372382 | 1385..1542 | 790 | 100 | Plus |
3R | 32079331 | 3R | 22373622..22374180 | 549..1107 | 530 | 73 | Plus |
3R | 32079331 | 3R | 14753414..14753603 | 1100..911 | 290 | 76.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:48:30 has no hits.
BS10658.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:53:18 Download gff for
BS10658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-RA | 58..1602 | 9..1555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:28:57 Download gff for
BS10658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-RA | 374..1923 | 9..1564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:15 Download gff for
BS10658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-RB | 155..1691 | 17..1553 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:53:19 Download gff for
BS10658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-RA | 374..1923 | 9..1564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:19:03 Download gff for
BS10658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-RB | 155..1691 | 17..1553 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:19:03 Download gff for
BS10658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22372226..22372384 | 1386..1548 | 97 | | Plus |
3R | 22370799..22372167 | 17..1385 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:15 Download gff for
BS10658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18196521..18197889 | 17..1385 | 100 | -> | Plus |
arm_3R | 18197948..18198106 | 1386..1548 | 97 | | Plus |
BS10658.pep Sequence
Translation from 16 to 1554
> BS10658.pep
MAAGADTQLEHMCRLQFDSPVPHVRLSGIVCTIGPASSSVEMLEKMMATG
MNIARMNFSHGSHEYHAATVANVRQAVKNYSAKLGYEHPVAIALDTKGPE
IRTGLIGGSGTAEIELKKGEKIKLTTNKEFLEKGSLEIVYVDYENIVNVV
KPGNRVFVDDGLISLIVREVGKDSLTCEVENGGSLGSRKGVNLPGVPVDL
PAVSEKDKSDLLFGVEQEVDMIFASFIRNAAALTEIRKVLGEKGKNIKII
SKIENQQGMHNLDEIIEAGDGIMVARGDLGIEIPAEKVFLAQKAMIARCN
KAGKPVICATQMLESMVKKPRPTRAEISDVANAVLDGADCVMLSGETAKG
EYPLECVLTMAKTCKEAEAALWHQNLFNDLVRGAGTIDASHAAAIAAVEA
ATKAKASAIVVITTSGKSAFQVSKYRPRCPIIAVTRFAQTARQAHLYRGL
VPLIYKEPGLGDWLKDVDVRVQFGLQVGKKNGFIKTGDSVVVVTGWKQGS
GFTNTIRIVTVE*
BS10658.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:49:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PyK-PA | 533 | CG7070-PA | 22..533 | 1..512 | 2595 | 100 | Plus |
PyK-PB | 512 | CG7070-PB | 1..512 | 1..512 | 2595 | 100 | Plus |
CG2964-PA | 554 | CG2964-PA | 14..513 | 7..509 | 1268 | 47.8 | Plus |
CG7069-PA | 744 | CG7069-PA | 1..461 | 51..511 | 1257 | 56.4 | Plus |
CG7362-PB | 793 | CG7362-PB | 109..413 | 191..493 | 704 | 49.8 | Plus |