Clone Sequence Records
BS10664.complete Sequence
2069 bp assembled on 2009-12-07
GenBank Submission: KX802461
> BS10664.complete
GAAGTTATCAGTCGACATGGCCACACAACAGACCAAGTCGCAGGACGAGC
TGGCATCCAAAGGCCTGGTGTCCAAGCAGCCGGAAAACATTAAGGAGGAG
AATGAGGGCGAGGAGGAAATCGAGGAGGCAGCCGTCGTCGTGCCTCCGGA
CAGCGGATGGGCCTGGGTGGTGATGGTCGCCTCCTTCCTCTGCTGCACGG
TCATTGACGGCATCGTCTTCTGCTCCGGACTCATTCAGGAGCAGCTGATG
GCAGAGTTCGGTGTGAGCAAGGCCTACGTGGCGTTCGTATCCTCGCTGCT
CAGTGGATGCTACTTGATGGCGGGACCCTTTGTTAGTGCCATGGCCAATC
GGTTTGGCTTCCGTCCGGTCACGATCACCGGAGCCATATTCGCAGCCATC
TGCTTCGGACTCTCGTACTTTGCCACCAGTGTGGAGTATCTGTTCCTAAT
CTACGGCGTGCTCGGAGGCATTGGATTCTGTATGGTGTACATACCCGCTG
TGGTGATCATTGGATTCTACTTTGAGAAGTGGCGTGCCCTGGCCACCGGA
GTTGCGATGTGCGGTTCCGGAGTTGGCACCTTTGTCTTCGCCCCACTGAC
CAAAATCCTGCTAAAGTCCGGCTGGCGTTATACGCTGGCCATTCAGGGCA
TCATCGTGTTGTCCTGTGCCCTCTTTGGCCTGGCCTTCCGACCCATCCAA
CCCATTACGCTGTCTGTGACCAACGAGGAGGGTGATGAGCAGGAGAAGAA
GAAGTTGAATGGTCATGGCAATACAGTGGCCCCTACGCCCCAACTCCACC
AGGCCGCCTTCACCAAGCCCCTGCCCGAGGGTCGTTTCGCCTACTCGATG
CCCAACTCGGCGCACAACACGTACATGGGTGCCTCCCAGCGTAACCATTA
TCCCACCGCCCAGGAGATCTTCAAGGGCATGAACCTGGAGCGCCGACCAT
CGGGCACGGCTCAGGGCAGCAAGGGCACGGAGCTGAAGCAGCTAAGGAAG
TCGCAGCCCACCACGCCCAACGGAGATCCCCAGCAGCTTACCTTCAATCT
GCACAAGGAACTGACCACCGTGGGTGAGAACGAGGAGGAGGCCGAGAACG
ATAACCTGTTGGAGACGGAGGCCAAGCCAGTGACCATCCAGGCACGCCGT
CACACCGTATCCGGACGCAGACCTCAGGACATTGGCAAGCGATCCGCCGC
TGCAGCTCACGAGGCCCACCATGGACAGTCGCACTCCTCATCCAGACCAA
TGTACCGAGACGATATCTTCTTCTCTGGATCTCTGACCAGGATTCCGCAA
TACCAATCGCAGACCTCGCTGGCCTACCACATGTCTGTGACGCGTCTGCC
CACCAAGCAGGACATGCTGGAGGATCGGCAGAAGGGATGCCGCATCTGTC
CGGAGGCAGTGCGTCGCACCTTATCCACCATGTTGGACACCACGCTGCTC
AAATCGCCCGCCTTTATGTGCCTGGCCTTCAGCGGCTTCCTCACCATGAT
GGGCTTCTTCGTGCCCTTTACCTTCCTGGTGGATCGCGCCAAGGCAGCGG
GTATGGATGAACAGGCGGCCTATGGAGTGCTCTCCGGAATTGGCGTTGTA
AACACATTTGCTAGGATCGTGTGCGGATCCCTTAGTTCCTTCCCTGCCGT
AAAGCCACTCTGGCTGAACAACTTTGCCCTAACCGCCGGCGGCATCGCTA
CCATCTGCAGCGGCATTGTCATCAACACGGCCACCCAGTGGACATTCGCC
CTGTTCTTCGGTATCTGCATTGCCTGCTTCTCCGCCCTGCGATCCCTGAT
CGCCGTGGAGCTGATCGGACTGGAGAAGCTGACCAACGCGTACGGATTCC
TGATGCTCTTCCAGGGATTGGCAGCTACTTTCGGCAGTCCCATTGCAGGT
GGCCTCTATGTGATGACAGGCAGCTACAACGCCGCCTTCTACTTCGCTGG
TGGCCTGATCCTCCTCTCGGCCTTCCTGTGCTACCCGCTCACCTGGGTCA
GCCGATGGGAGGAGCGGCGCAACGAGAAGCTAACACCCCTGCCGGCGGCC
TAAAAGCTTTCTAGACCAT
BS10664.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:05:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8468-RB | 2037 | CG8468-PB | 1..2037 | 17..2053 | 10140 | 99.9 | Plus |
| CG8468-RA | 2037 | CG8468-PA | 1..2037 | 17..2053 | 10140 | 99.9 | Plus |
| CG8468-RC | 2037 | CG8468-PC | 1..2037 | 17..2053 | 10140 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:05:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8468-RB | 3961 | CG8468-RB | 872..2908 | 17..2053 | 10140 | 99.9 | Plus |
| CG8468-RA | 3396 | CG8468-RA | 307..2343 | 17..2053 | 10140 | 99.9 | Plus |
| CG8468-RC | 3417 | CG8468-RC | 328..2364 | 17..2053 | 10140 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:05:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14227414..14229298 | 17..1901 | 9380 | 99.8 | Plus |
| 2R | 25286936 | 2R | 14229410..14229567 | 1896..2053 | 790 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:05:16 has no hits.
BS10664.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:45:27 Download gff for
BS10664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-RB | 848..2882 | 17..2051 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:05:33 Download gff for
BS10664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-RC | 328..2362 | 17..2051 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:01:41 Download gff for
BS10664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-RB | 848..2882 | 17..2051 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:03:43 Download gff for
BS10664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-RC | 328..2362 | 17..2051 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:03:43 Download gff for
BS10664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14227414..14229295 | 17..1898 | 99 | -> | Plus |
| 2R | 14229413..14229565 | 1899..2051 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:05:33 Download gff for
BS10664.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10116918..10117070 | 1899..2051 | 100 | | Plus |
| arm_2R | 10114919..10116800 | 17..1898 | 99 | -> | Plus |
BS10664.3prime Sequence
884 bp (817 high quality bases) assembled on 2006-04-19
> BS10664.3prime
ATGGTCTAGAAAGCTTTTAGGCCGCCGGCAGGGGTGTTAGCTTCTCGTTG
CGCCGCTCCTCCCATCGGCTGACCCAGGTGAGCGGGTAGCACAGGAAGGC
CGAGAGGAGGATCAGGCCACCAGCGAAGTAGAAGGCGGCGTTGTAGCTGC
CTGTCATCACATAGAGGCCACCTGCAATGGGACTGCCGAAAGTAGCTGCC
AATCCCTGGAAGAGCATCAGGAATCCGTACGCGTTGGTCAGCTTCTCCAG
TCCGATCAGCTCCACGGCGATCAGGGATCGCAGGGCGGAGAAGCAGGCAA
TGCAGATACCGAAGAACAGGGCGAATGTCCACTGGGTGGCCGTGTTGATG
ACAATGCCGCTGCAGATGGTAGCGATGCCGCCGGCGGTTAGGGCAAAGTT
GTTCAGCCAGAGTGGCTTTACGGCAGGGAAGGAACTAAGGGATCCGCACA
CGATCCTAGCAAATGTGTTTACAACGCCAATTCCGGAGAGCACTCCATAG
GCCGCCTGTTCATCCATACCCGCTGCCTTGGCGCGATCCACCAGGAAGGT
AAAGGGCACGAAGAAGCCCATCATGGTGAGGAAGCCGCTGAAGGCCAGGC
ACATAAAGGCGGGCGATTTGAGCAGCGTGGTGTCCAACATGGTGGATAAG
GTGCGACGCACTGCCTCCGGACAGATGCGGCATCCCTTCTGCCGATCCTC
CAGCATGTCCTGCTTGGTGGGCAGACGCGTCACAGACATGTGGTAGGCCA
GCGAGGTCTGCGATTGGTATTGCGGAATCCTGGTCAGAGATCCAGAGAAG
AAGATATCGTCTCGGTACATTGGTCTGGATGAGGAGTGCGACTGTCCATG
GTGGGCCTCGTGAGCTGCAGCGGCGGATCGCTTG
BS10664.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:53:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8468-PC | 2037 | CG8468-RC | 1170..2037 | 884..17 | 4290 | 99.7 | Minus |
| CG8468-PA | 2037 | CG8468-RA | 1170..2037 | 884..17 | 4290 | 99.7 | Minus |
| CG8468-PB | 2037 | CG8468-RB | 1170..2037 | 884..17 | 4290 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 02:45:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8468-RB | 3961 | CG8468-RB | 2041..2908 | 884..17 | 4310 | 99.8 | Minus |
| CG8468-RA | 3396 | CG8468-RA | 1476..2343 | 884..17 | 4310 | 99.8 | Minus |
| CG8468-RC | 3417 | CG8468-RC | 1497..2364 | 884..17 | 4310 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 02:45:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14228583..14229298 | 884..169 | 3550 | 99.7 | Minus |
| 2R | 25286936 | 2R | 14229410..14229567 | 174..17 | 790 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 02:45:48 has no hits.
BS10664.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:46:22 Download gff for
BS10664.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-PC | 1170..2037 | 17..884 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:09:30 Download gff for
BS10664.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-PB | 1170..2037 | 17..884 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 07:49:44 Download gff for
BS10664.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-RC | 1497..2373 | 8..884 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 05:23:04 Download gff for
BS10664.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-RC | 1497..2373 | 8..884 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 05:23:04 Download gff for
BS10664.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14228583..14229295 | 172..884 | 99 | -> | Minus |
| 2R | 14229413..14229576 | 8..171 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 07:49:44 Download gff for
BS10664.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10116088..10116800 | 172..884 | 99 | -> | Minus |
| arm_2R | 10116918..10117081 | 8..171 | 97 | | Minus |
BS10664.5prime Sequence
845 bp (756 high quality bases) assembled on 2006-04-19
> BS10664.5prime
GAAGTTATCAGTCGACATGGCCACACAACAGACCAAGTCGCAGGACGAGC
TGGCATCCAAAGGCCTGGTGTCCAAGCAGCCGGAAAACATTAAGGAGGAG
AATGAGGGCGAGGAGGAAATCGAGGAGGCAGCCGTCGTCGTGCCTCCGGA
CAGCGGATGGGCCTGGGTGGTGATGGTCGCCTCCTTCCTCTGCTGCACGG
TCATTGACGGCATCGTCTTCTGCTCCGGACTCATTCAGGAGCAGCTGATG
GCAGAGTTCGGTGTGAGCAAGGCCTACGTGGCGTTCGTATCCTCGCTGCT
CAGTGGATGCTACTTGATGGCGGGACCCTTTGTTAGTGCCATGGCCAATC
GGTTTGGCTTCCGTCCGGTCACGATCACCGGAGCCATATTCGCAGCCATC
TGCTTCGGACTCTCGTACTTTGCCACCAGTGTGGAGTATCTGTTCCTAAT
CTACGGCGTGCTCGGAGGCATTGGATTCTGTATGGTGTACATACCCGCTG
TGGTGATCATTGGATTCTACTTTGAGAAGTGGCGTGCCCTGGCCACCGGA
GTTGCGATGTGCGGTTCCGGAGTTGGCACCTTTGTCTTCGCCCCACTGAC
CAAAATCCTGCTAAAGTCCGGCTGGCGTTATACGCTGGCCATTCAGGGCA
TCATCGTGTTGTCCTGTGCCCTCTTTGGCCTGGCCTTCCGACCCATCCAA
CCCATTACGCTGTCTGTGACCAACGAGGAGGGTGATGAGCAGGAGAAGAA
GAAGTTGAATGGTCATGGCAATACAGTGGCCCCTACGCCCCAACTCCACC
AGGCCGCCCTTCACAAGCCCCTGCCCGAGGGTCGTTTCGCCTACT
BS10664.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:53:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8468-PC | 2037 | CG8468-RC | 1..792 | 17..808 | 3960 | 100 | Plus |
| CG8468-PA | 2037 | CG8468-RA | 1..792 | 17..808 | 3960 | 100 | Plus |
| CG8468-PB | 2037 | CG8468-RB | 1..792 | 17..808 | 3960 | 100 | Plus |
| CG8468-PC | 2037 | CG8468-RC | 798..829 | 814..845 | 160 | 100 | Plus |
| CG8468-PA | 2037 | CG8468-RA | 798..829 | 814..845 | 160 | 100 | Plus |
| CG8468-PB | 2037 | CG8468-RB | 798..829 | 814..845 | 160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:31:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8468-RB | 3961 | CG8468-RB | 872..1700 | 17..845 | 4100 | 99.8 | Plus |
| CG8468-RA | 3396 | CG8468-RA | 307..1135 | 17..845 | 4100 | 99.8 | Plus |
| CG8468-RC | 3417 | CG8468-RC | 328..1156 | 17..845 | 4100 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:31:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14227414..14228242 | 17..845 | 4085 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:31:10 has no hits.
BS10664.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:46:23 Download gff for
BS10664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-PC | 1..829 | 17..845 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:09:31 Download gff for
BS10664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-PB | 1..829 | 17..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:45:40 Download gff for
BS10664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-RC | 328..1156 | 17..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:44:17 Download gff for
BS10664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-RC | 328..1156 | 17..845 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 23:44:17 Download gff for
BS10664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14227408..14228242 | 9..845 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:45:40 Download gff for
BS10664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10114913..10115747 | 9..845 | 99 | | Plus |
BS10664.pep Sequence
Translation from 16 to 2052
> BS10664.pep
MATQQTKSQDELASKGLVSKQPENIKEENEGEEEIEEAAVVVPPDSGWAW
VVMVASFLCCTVIDGIVFCSGLIQEQLMAEFGVSKAYVAFVSSLLSGCYL
MAGPFVSAMANRFGFRPVTITGAIFAAICFGLSYFATSVEYLFLIYGVLG
GIGFCMVYIPAVVIIGFYFEKWRALATGVAMCGSGVGTFVFAPLTKILLK
SGWRYTLAIQGIIVLSCALFGLAFRPIQPITLSVTNEEGDEQEKKKLNGH
GNTVAPTPQLHQAAFTKPLPEGRFAYSMPNSAHNTYMGASQRNHYPTAQE
IFKGMNLERRPSGTAQGSKGTELKQLRKSQPTTPNGDPQQLTFNLHKELT
TVGENEEEAENDNLLETEAKPVTIQARRHTVSGRRPQDIGKRSAAAAHEA
HHGQSHSSSRPMYRDDIFFSGSLTRIPQYQSQTSLAYHMSVTRLPTKQDM
LEDRQKGCRICPEAVRRTLSTMLDTTLLKSPAFMCLAFSGFLTMMGFFVP
FTFLVDRAKAAGMDEQAAYGVLSGIGVVNTFARIVCGSLSSFPAVKPLWL
NNFALTAGGIATICSGIVINTATQWTFALFFGICIACFSALRSLIAVELI
GLEKLTNAYGFLMLFQGLAATFGSPIAGGLYVMTGSYNAAFYFAGGLILL
SAFLCYPLTWVSRWEERRNEKLTPLPAA*
BS10664.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8468-PB | 678 | CG8468-PB | 1..678 | 1..678 | 3520 | 100 | Plus |
| CG8468-PA | 678 | CG8468-PA | 1..678 | 1..678 | 3520 | 100 | Plus |
| CG8468-PC | 678 | CG8468-PC | 1..678 | 1..678 | 3520 | 100 | Plus |
| CG13907-PB | 816 | CG13907-PB | 35..769 | 11..675 | 973 | 34.9 | Plus |
| CG13907-PA | 816 | CG13907-PA | 35..769 | 11..675 | 973 | 34.9 | Plus |
