Clone BS10686 Report

Search the DGRC for BS10686

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:106
Well:86
Vector:pDNR-Dual
Associated Gene/Transcriptobsolete transcript model
Protein status:BS10686.pep: validated full length
Sequenced Size:16

Clone Sequence Records

BS10686.3prime Sequence

781 bp (780 high quality bases) assembled on 2006-04-19

> BS10686.3prime
ATGGTCTAGAAAGCTTCTAATCCGCAATGGCCGTGTAGGGTAGACTGCTG
TGCTTCGGCTTCGTCTTGTTGATGAACACCTTGATGGCGCCATTGAAATC
GGCGCTGACCAACACATAACCACATCCCTTTTTGTGCTGCTCGACCAGTG
GATCCGGCTGATTGTGAGCCAACTTCTCATTGGAGATCTCATCCGGTTCG
GGCTTGATGATAGCCTCTGGGTGTGGCGCGAATATGGCACAAGTGACCGT
AGCATTGTGTGCTTTAATGCCTTCCCAAAAGTCGCTGCGATCGCGGCGAA
CAGAACTGAGTTTTGAGTAATCGTGGTTTGTTTTCCAAATATAGATGCAC
TGATTCTCGGACCCGGCTATGATGTACTTTCCATCGTGGCTGAACGAGCC
CTTAATTTGCGAGGACACATTCAAGTAGCCCTTGTACTTGCAGGACAAGT
TCAAGTCCCTCAAATCGTACAGGCGCACTCTGCTGTCGTTGGATGTGACT
AGAATCTTGTCTTCGCCGGGCATCGGTTCAATGCCACTGATCTTGCGGCC
AATGCGGTTTTTACCCCTGGTGGAGCGCACATGAATCTGCGTGTGGTATT
TCAGCTGATCCGTGTTATAAAATATGCAGCGACCATCGTAGCTCCCTACA
ACGGCGAACTGTCCATTTTGGCAGAAGTTGGCAGCCGTTATAAGCTTTGT
CTGGCCATCTACCTCATTCCACAGTGCCACCTTTTTGTCGGGTATGTTCC
ACAACCTTAGTTTGCCATCGAGGCTGCCACT

BS10686.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-PA 3339 CG34133-RA 2575..3339 781..17 3825 100 Minus
CG34133-PB 3237 CG34133-RB 2473..3237 781..17 3825 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:11:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-RC 4263 CG34133-RC 2906..3670 781..17 3825 100 Minus
CG34133-RE 4209 CG34133-RE 2852..3616 781..17 3825 100 Minus
CG34133-RB 3831 CG34133-RB 2816..3580 781..17 3825 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:11:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29873663..29874144 781..300 2410 100 Minus
3R 32079331 3R 29874409..29874566 174..17 790 100 Minus
3R 32079331 3R 29874205..29874346 301..160 665 97.9 Minus
Blast to na_te.dros performed on 2015-02-12 17:11:20 has no hits.

BS10686.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:47:03 Download gff for BS10686.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7814-PA 1903..2667 17..781 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:10:25 Download gff for BS10686.3prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-PB 2473..3237 17..781 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 21:29:00 Download gff for BS10686.3prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 2816..3588 5..781 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:08:21 Download gff for BS10686.3prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 2816..3588 5..781 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:08:21 Download gff for BS10686.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 29873663..29874142 302..781 100 -> Minus
3R 29874205..29874333 173..301 100 -> Minus
3R 29874411..29874574 5..172 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 21:29:00 Download gff for BS10686.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25699385..25699864 302..781 100 -> Minus
arm_3R 25699927..25700055 173..301 100 -> Minus
arm_3R 25700133..25700296 5..172 97   Minus

BS10686.5prime Sequence

837 bp (745 high quality bases) assembled on 2006-04-19

> BS10686.5prime
GAAGTTATCAGTCGACATGAGCACGCCCAGGGTGTCGCCCAAGCATCAGC
AGAGTGGTAAGGAAGTAGCCGCCACCACGACAGGGATTCCTAGTGCCGCA
TCCTCCGCGCAGAGCTCTGGTGTTGGCTCGATGGTTTTGCAGGAACCAGA
TGTGATAGCAAGCACAAAGCTTGCCCAGTCTAAAACTACTGATTCCATCA
CCTCGTCGGGACCCGTGGCGCCACCGCGAAGAAAGAAGAAGTCTCGTAAT
TGCTCCATCAGTTCCTCAGATCAGTATAGTCTTCCTCCTGCGGACAACGA
AGACACTGATAGTGATACGCGGTCTGTGAAGAGTGTGCAGGGTCTTCAGC
AAAAGCTGCGGGATGACTTTGTCATGGAGTTCGAGAGCTCTCTTAACAAT
GCAACTAGTTCAGCCTCCAATATCACCCTGACCTGCTCCTCCACCAATAC
AGTTGTTTCTGCATCGGCTTCGACTTCGGCAGCATCTTCGTCCTTGCCAT
CAACAATTGCAATTCATATGCGCCCCATGGTCGCTTCGGTCACCATTGCT
GGTCCAAAACTCACTCAATCTCTGGGCAGCAGTTCCACGTCGGTCCACTC
CAAGCCAAGTCCATCAAATTCAGCGAAAAGCAATTCCGCACCAGCGAGGG
TTAGTTCCATTGATCCGAATCAGGGTCTGAATCTGTTTAAGGCCATCCAG
GGAGGTTATGTGGTGAAACCACGCGACGAGGCCAGCAACAAGGCGCAAGG
CCCATCCCAAGATGAAATCGAGCGCATTGAGAAAATGCTGATGGAAAGCG
CGAACCGACCAAAGCTGGGCGGAACGGGGATCAACAG

BS10686.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-PA 3339 CG34133-RA 673..1474 17..818 4010 100 Plus
CG34133-PB 3237 CG34133-RB 571..1372 17..818 4010 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:38:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-RC 4263 CG34133-RC 1004..1815 17..828 4030 99.8 Plus
CG34133-RE 4209 CG34133-RE 1004..1815 17..828 4030 99.8 Plus
CG34133-RB 3831 CG34133-RB 914..1725 17..828 4030 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 04:38:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29871586..29872223 17..654 3190 100 Plus
3R 32079331 3R 29872281..29872457 652..828 855 98.9 Plus
Blast to na_te.dros performed on 2015-02-04 04:38:28 has no hits.

BS10686.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:47:04 Download gff for BS10686.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7814-PA 1..821 17..837 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:10:27 Download gff for BS10686.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-PB 567..1391 13..837 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 07:03:44 Download gff for BS10686.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 910..1734 13..837 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 06:38:04 Download gff for BS10686.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 910..1734 13..837 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 06:38:04 Download gff for BS10686.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29871582..29872223 13..654 99 -> Plus
3R 29872284..29872466 655..837 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 07:03:44 Download gff for BS10686.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25697304..25697945 13..654 99 -> Plus
arm_3R 25698006..25698188 655..837 97   Plus

BS10686.complete Sequence

2699 bp assembled on 2007-11-30

> BS10686.complete
GAAGTTATCAGTCGACATGAGCACGCCCAGGGTGTCGCCCAAGCATCAGC
AGAGTGGTAAGGAAGTAGCCGCCACCACGACAGGGATTCCTAGTGCCGCA
TCCTCCGCGCAGAGCTCTGGTGTTGGCTCGATGGTTTTGCAGGAACCAGA
TGTGATAGCAAGCACAAAGCTTGCCCAGTCTAAAACTACTGATTCCATCA
CCTCGTCGGGACCCGTGGCGCCACCGCGAAGAAAGAAGAAGTCTCGTAAT
TGCTCCATCAGTTCCTCAGATCAGTATAGTCTTCCTCCTGCGGACAACGA
AGACACTGATAGTGATACGCGGTCTGTGAAGAGTGTGCAGGGTCTTCAGC
AAAAGCTGCGGGATGACTTTGTCATGGAGTTCGAGAGCTCTCTTAACAAT
GCAACTAGTTCAGCCTCCAATATCACCCTGACCTGCTCCTCCACCAATAC
AGTTGTTTCTGCATCGGCTTCGACTTCGGCAGCATCTTCGTCCTTGCCAT
CAACAATTGCAATTCATATGCGCCCCATGGTCGCTTCGGTCACCATTGCT
GGTCCAAAACTCACTCAATCTCTGGGCAGCAGTTCCACGTCGGTCCACTC
CAAGCCAAGTCCATCAAATTCAGCGAAAAGCAATTCCGCACCAGCGAGGG
TTAGTTCCATTGATCCGAATCAGGGTCTGAATCTGTTTAAGGCCATCCAG
GGAGGTTATGTGGTGAAACCACGCGACGAGGCCAGCAACAAGGCGCAAGG
CCCATCCCAAGATGAAATCGAGCGCATTGAGAAAATGCTGATGGAAAGCG
CGAACCGACCAAAGCTGGCGGGAACGGGATCCAACAGTTTAGGAAGCTCT
ACACGCTATCCCGGATTTTATCGCGGTGTTAACGATAAGGAGCGCCGGAA
GTCCGCTGGCGACGAAGATGTGCTCAAACAGATGAACATTTATGTGCGCA
CGCGAACCAGCTCAGGCAAGCAGCTAACCGACTTTGAGATCCTTGAACAA
GTTCCTGTTAAAAATTTAGACACGGGAGAAAATATGCCTCTATCCGAAAT
GCGTTCACCACCAGTGCCTGAGGGATGGAATCCGCTCTCGCTACACATCC
TTAAGCTGACCTCCCACCTGGAGGTGATCCAGAAGGAGTCCGACGAGGAG
AGTGTGATTGGCATACCGCCTAGCATCGAGGGTCAGCAGCCCGACGAAGA
AGAACTGGAAACGGAAGATGGCAGTCGACTGAAAAAGAAAACGGCCCGGA
TCAAGAGGTTCTTTGGCAGCACAATGCGAAAGACGGTGGACAAGGCCAAG
TCGATTGCATCCGAAGTGTCGCATGCGCGACACAAAGAGGATGTGGCTGA
TATTGTTGATGCAATGAATCCCGAGCAAAATATCAAAATCAAGGCTTCCT
CGTCCAACAAGGGACCCTATGAGTTTACCAAACTGCAGCACGTCCAGGAT
TTGAGTGGCGAAGATACCAGTGCCGTGTGGTGCATGAAGTTCAGTTCCTG
CGGTCGACTCCTGGCCACTGCTGGACAGGACAAGGTGTTAAGGATTTGGG
TTCTTAAAGATGCCTATCCGTTTTTCCAGGACATGCGCAACAAATACAAT
GCTGACCAAAAATCCTCACCTACGCCCTCGCAAGAGTCACTCGTCTCGCA
GCATTCGGCTGAGGAAGCCATTGCCATGGCTACTGCCGCAGAGAAATGCA
CGGGCCCCTTCATGCCAAAGCCCTTCTGCACCTACAATGGACACACCTCC
GATTTACTGGACGTCAGCTGGTCAAAGAATTACTTCATACTGTCAAGCAG
CATGGACAAGACTGTGCGGCTCTGGCACATTTCCAGAAAGGAGTGCCTTT
GCTGTTTTCAGCATATCGATTTTGTCACCGCTATTGCGTTCCATCCACGC
GATGATCGCTACTTTTTGAGTGGCAGCCTCGATGGCAAACTAAGGTTGTG
GAACATACCCGACAAAAAGGTGGCACTGTGGAATGAGGTAGATGGCCAGA
CAAAGCTTATAACGGCTGCCAACTTCTGCCAAAATGGACAGTTCGCCGTT
GTAGGGAGCTACGATGGTCGCTGCATATTTTATAACACGGATCAGCTGAA
ATACCACACGCAGATTCATGTGCGCTCCACCAGGGGTAAAAACCGCATTG
GCCGCAAGATCAGTGGCATTGAACCGATGCCCGGCGAAGACAAGATTCTA
GTCACATCCAACGACAGCAGAGTGCGCCTGTACGATTTGAGGGACTTGAA
CTTGTCCTGCAAGTACAAGGGCTACTTGAATGTGTCCTCGCAAATTAAGG
GCTCGTTCAGCCACGATGGAAAGTACATCATAGCCGGGTCCGAGAATCAG
TGCATCTATATTTGGAAAACAAACCACGATTACTCAAAACTCAGTTCTGT
TCGCCGCGATCGCAGCGACTTTTGGGAAGGCATTAAAGCACACAATGCTA
CGGTCACTTGTGCCATATTCGCGCCACACCCAGAGGCTATCATCAAGCCC
GAACCGGATGAGATCTCCAATGAGAAGTTGGCTCACAATCAGCCGGATCC
ACTGGTCGAGCAGCACAAAAAGGGATGTGGTTATGTGTTGGTCAGCGCCG
ATTTCAATGGCGCCATCAAGGTGTTCATCAACAAGACGAAGCCGAAGCAC
AGCAGTCTACCCTACACGGCCATTGCGGATTAGAAGCTTTCTAGACCAT

BS10686.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-RC 3327 CG34133-PC 661..3327 17..2683 13335 100 Plus
CG34133-RB 3237 CG34133-PB 571..3237 17..2683 13335 100 Plus
CG34133-RE 3273 CG34133-PE 1608..3273 1018..2683 8330 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:51:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-RC 4263 CG34133-RC 1004..3670 17..2683 13335 100 Plus
CG34133-RB 3831 CG34133-RB 914..3580 17..2683 13335 100 Plus
CG34133-RE 4209 CG34133-RE 1951..3616 1018..2683 8330 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29873322..29874144 1578..2400 4115 100 Plus
3R 32079331 3R 29872540..29873265 855..1580 3630 100 Plus
3R 32079331 3R 29871586..29872223 17..654 3190 100 Plus
3R 32079331 3R 29872281..29872488 652..859 1025 99.5 Plus
3R 32079331 3R 29874409..29874566 2526..2683 790 100 Plus
3R 32079331 3R 29874205..29874346 2399..2540 665 97.9 Plus
Blast to na_te.dros performed on 2014-11-28 00:51:32 has no hits.

BS10686.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:13:23 Download gff for BS10686.complete
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 567..3237 13..2683 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:44:10 Download gff for BS10686.complete
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 905..3583 13..2695 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:01:02 Download gff for BS10686.complete
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 914..3580 17..2683 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:31:48 Download gff for BS10686.complete
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 909..3575 17..2683 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:51 Download gff for BS10686.complete
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 914..3580 17..2683 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:51 Download gff for BS10686.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29871586..29872223 17..654 100 -> Plus
3R 29872284..29872484 655..855 100 -> Plus
3R 29872541..29873264 856..1579 100 -> Plus
3R 29873324..29874142 1580..2398 100 -> Plus
3R 29874205..29874333 2399..2527 100 -> Plus
3R 29874411..29874566 2528..2683 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:01:02 Download gff for BS10686.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25700133..25700288 2528..2683 100   Plus
arm_3R 25697308..25697945 17..654 100 -> Plus
arm_3R 25698006..25698206 655..855 100 -> Plus
arm_3R 25698263..25698986 856..1579 100 -> Plus
arm_3R 25699046..25699864 1580..2398 100 -> Plus
arm_3R 25699927..25700055 2399..2527 100 -> Plus

BS10686.pep Sequence

Translation from 16 to 2682

> BS10686.pep
MSTPRVSPKHQQSGKEVAATTTGIPSAASSAQSSGVGSMVLQEPDVIAST
KLAQSKTTDSITSSGPVAPPRRKKKSRNCSISSSDQYSLPPADNEDTDSD
TRSVKSVQGLQQKLRDDFVMEFESSLNNATSSASNITLTCSSTNTVVSAS
ASTSAASSSLPSTIAIHMRPMVASVTIAGPKLTQSLGSSSTSVHSKPSPS
NSAKSNSAPARVSSIDPNQGLNLFKAIQGGYVVKPRDEASNKAQGPSQDE
IERIEKMLMESANRPKLAGTGSNSLGSSTRYPGFYRGVNDKERRKSAGDE
DVLKQMNIYVRTRTSSGKQLTDFEILEQVPVKNLDTGENMPLSEMRSPPV
PEGWNPLSLHILKLTSHLEVIQKESDEESVIGIPPSIEGQQPDEEELETE
DGSRLKKKTARIKRFFGSTMRKTVDKAKSIASEVSHARHKEDVADIVDAM
NPEQNIKIKASSSNKGPYEFTKLQHVQDLSGEDTSAVWCMKFSSCGRLLA
TAGQDKVLRIWVLKDAYPFFQDMRNKYNADQKSSPTPSQESLVSQHSAEE
AIAMATAAEKCTGPFMPKPFCTYNGHTSDLLDVSWSKNYFILSSSMDKTV
RLWHISRKECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDK
KVALWNEVDGQTKLITAANFCQNGQFAVVGSYDGRCIFYNTDQLKYHTQI
HVRSTRGKNRIGRKISGIEPMPGEDKILVTSNDSRVRLYDLRDLNLSCKY
KGYLNVSSQIKGSFSHDGKYIIAGSENQCIYIWKTNHDYSKLSSVRRDRS
DFWEGIKAHNATVTCAIFAPHPEAIIKPEPDEISNEKLAHNQPDPLVEQH
KKGCGYVLVSADFNGAIKVFINKTKPKHSSLPYTAIAD*

BS10686.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:34:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-PC 1108 CG34133-PC 221..1108 1..888 4595 100 Plus
CG34133-PB 1078 CG34133-PB 191..1078 1..888 4595 100 Plus
CG34133-PE 1090 CG34133-PE 221..1090 1..888 4476 98 Plus
wds-PB 361 CG17437-PB 40..338 452..822 207 22.7 Plus
wds-PA 361 CG17437-PA 40..338 452..822 207 22.7 Plus