Clone BS10694 Report

Search the DGRC for BS10694

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:106
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptHrb27C-RD
Protein status:BS10694.pep: full length peptide match
Sequenced Size:1299

Clone Sequence Records

BS10694.3prime Sequence

904 bp (740 high quality bases) assembled on 2006-04-19

> BS10694.3prime
ATGGTCTAGAAAGCTTTTTAGACAGCCTGCGAGGTTGCATAGGGTGGCTG
CGTGGAGCTGTCGTTGCCGTACGCTGATCGCGGCCCTGCTCCGTAGTTCG
AGGCGCCCTCCTGCTTCACATAGTTGCTGTAGTCGTAGTCGTACCCGGAT
CCATAGCCGCCGTAGTCGTACTCAGAGCCAGACTTGGAGGCCGAATTACC
GGGTCCGGTCCGGGGCATGCCGCCCACTGGTCCAGTGGTCGAGGGACCGC
CCGTCGCCCAGGCTTGAGCACGCGAGTACATGTCAGTGGCGGTGCCCGCT
CCGGCTCCTGGTGCCCCAGTGGGTCCGGCAGAGTTAGGTGGCATGTTCCA
CGAGTTCCAGCTGCCGCCGCCCGATGGTCCCGAAGGAGCTCCGGTCGACG
TCGAGTTATACATGTCGTATCCGCCGTAGCCCTGCGTCTGCTGAGGTCCA
GCGTAGTTCGACCACTGCGGTGGTGGTCCCTGGGGTCCTGGTGGAGCTCC
CCATCCCTGGTACGATCCTGGGCCACTGTTGCCGTAGCCGTATTGTTGCT
GCTGCGGCGAGGTGCCCCAACCCTGATAGCCAGGCATCATATTCGGCGCT
CCAATGGGCATATTCAGCGGCGGTCCACCCATCTGGCCATTCTGGCCCTG
CATCATGTTGATGGGAGCATGGTGCGGTCCCCAGTGGCTGCACTCGTTAC
CAAGCTTGCCATAGGCGCCTCCCACGGTACTGTTGTTGGAGTTTTGGCCG
CCAGATCCATCACGAGGCTCGGCCTTCTTGATTTCGACCTGCTTGCCATT
CAGATTGATGTACCGCTCGTTGGTCACGTGCTCAACGGAGGACTCCTCCT
CGAAGGAGAGAAAGCCGAAGCCGCGGGACTTCTTCTTCTCCTGGTCGTAC
ATGA

BS10694.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG10377-PA 1266 Hrb27C-RA 380..1266 904..18 4435 100 Minus
CG10377-PC 1266 Hrb27C-RC 380..1266 904..18 4435 100 Minus
CG10377-PB 1266 Hrb27C-RB 380..1266 904..18 4435 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:05:26
Subject Length Description Subject Range Query Range Score Percent Strand
Hrb27C-RE 2110 CG10377-RE 633..1520 904..17 4440 100 Minus
Hrb27C-RD 2137 CG10377-RD 660..1547 904..17 4440 100 Minus
Hrb27C-RH 8240 CG10377-RH 752..1639 904..17 4440 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6924682..6925456 791..17 3875 100 Minus
2L 23513712 2L 6924285..6924402 904..787 590 100 Minus
Blast to na_te.dros performed on 2015-02-10 20:05:25 has no hits.

BS10694.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:47:16 Download gff for BS10694.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10377-PB 381..1266 18..903 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:10:43 Download gff for BS10694.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10377-PB 381..1266 18..903 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:42:39 Download gff for BS10694.3prime
Subject Subject Range Query Range Percent Splice Strand
Hrb27C-RH 753..1642 14..903 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:40:49 Download gff for BS10694.3prime
Subject Subject Range Query Range Percent Splice Strand
Hrb27C-RH 753..1642 14..903 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:40:49 Download gff for BS10694.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6924286..6924400 789..903 100 -> Minus
2L 6924685..6925459 14..788 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:42:39 Download gff for BS10694.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6924286..6924400 789..903 100 -> Minus
arm_2L 6924685..6925459 14..788 99   Minus

BS10694.5prime Sequence

879 bp (816 high quality bases) assembled on 2006-04-19

> BS10694.5prime
GAAGTTATCAGTCGACATGGAGGAAGACGAGAGGGGCAAACTTTTTGTGG
GCGGTCTATCCTGGGAGACGACGCAGGAGAACCTGTCGCGCTACTTCTGC
CGCTTCGGGGACATCATTGACTGTGTGGTGATGAAGAACAACGAGAGCGG
CAGGTCGCGCGGCTTTGGCTTCGTTACCTTCGCCGATCCCACCAACGTCA
ACCACGTGCTGCAGAACGGACCGCACACGCTCGACGGTCGCACCATCGAC
CCCAAGCCGTGCAATCCGCGCACTCTGCAGAAACCGAAGAAGGGCGGCGG
CTACAAGGTCTTCCTGGGTGGCCTGCCCTCGAACGTCACCGAGACCGATC
TGCGGACCTTCTTTAACCGCTACGGCAAGGTCACCGAGGTGGTTATCATG
TACGACCAGGAGAAGAAGAAGTCCCGCGGCTTCGGCTTTCTCTCCTTCGA
GGAGGAGTCCTCCGTTGAGCACGTGACCAACGAGCGGTACATCAATCTGA
ATGGCAAGCAGGTCGAAATCAAGAAGGCCGAGCCTCGTGATGGATCTGGC
GGCCAAAACTCCAACAACAGTACCGTGGGAGGCGCCTATGGCAAGCTTGG
TAACGAGTGCAGCCACTGGGGACCGCACCATGCTCCCATCAACATGATGC
AGGGCCAGAATGGCCAGATGGGTGGACCGCCGCTGAATATGCCCATTGGA
GCGCCGAATATGATGCCTGGCTATCAGGGTTGGGGCACCTCGCCGCAGCA
GCAACAATACGGCTACGGCAACAGTGGCCCAGGATCGTACCAGGGATGGG
GAGCTCCACCAGGACCCCAGGGACCACCACCGCAGTGGTCGAACTACGCT
GGACCTCAGCAGACGCAGGGCTACNGCGG

BS10694.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:54:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG10377-PA 1266 Hrb27C-RA 1..863 17..879 4296 99.8 Plus
CG10377-PC 1266 Hrb27C-RC 1..863 17..879 4296 99.8 Plus
CG10377-PB 1266 Hrb27C-RB 1..863 17..879 4296 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:52:06
Subject Length Description Subject Range Query Range Score Percent Strand
Hrb27C-RE 2110 CG10377-RE 253..1116 16..879 4309 99.9 Plus
Hrb27C-RD 2137 CG10377-RD 280..1143 16..879 4309 99.9 Plus
Hrb27C-RH 8240 CG10377-RH 372..1235 16..879 4309 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6923905..6924402 16..513 2490 100 Plus
2L 23513712 2L 6924682..6925052 509..879 1844 99.7 Plus
Blast to na_te.dros performed on 2015-02-13 00:52:03 has no hits.

BS10694.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:47:17 Download gff for BS10694.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10377-PB 1..863 17..879 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:10:44 Download gff for BS10694.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10377-PB 1..863 17..879 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:03:30 Download gff for BS10694.5prime
Subject Subject Range Query Range Percent Splice Strand
Hrb27C-RH 366..1235 9..879 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:49:27 Download gff for BS10694.5prime
Subject Subject Range Query Range Percent Splice Strand
Hrb27C-RH 366..1235 9..879 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:49:27 Download gff for BS10694.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6923899..6924400 9..511 99 -> Plus
2L 6924685..6925052 512..879 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:03:30 Download gff for BS10694.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6923899..6924400 9..511 99 -> Plus
arm_2L 6924685..6925052 512..879 99   Plus

BS10694.complete Sequence

1299 bp assembled on 2009-02-12

> BS10694.complete
GAAGTTATCAGTCGACATGGAGGAAGACGAGAGGGGCAAACTTTTTGTGG
GCGGTCTATCCTGGGAGACGACGCAGGAGAACCTGTCGCGCTACTTCTGC
CGCTTCGGGGACATCATTGACTGTGTGGTGATGAAGAACAACGAGAGCGG
CAGGTCGCGCGGCTTTGGCTTCGTTACCTTCGCCGATCCCACCAACGTCA
ACCACGTGCTGCAGAACGGACCGCACACGCTCGACGGTCGCACCATCGAC
CCCAAGCCGTGCAATCCGCGCACTCTGCAGAAACCGAAGAAGGGCGGCGG
CTACAAGGTCTTCCTGGGTGGCCTGCCCTCGAACGTCACCGAGACCGATC
TGCGGACCTTCTTTAACCGCTACGGCAAGGTCACCGAGGTGGTTATCATG
TACGACCAGGAGAAGAAGAAGTCCCGCGGCTTCGGCTTTCTCTCCTTCGA
GGAGGAGTCCTCCGTTGAGCACGTGACCAACGAGCGGTACATCAATCTGA
ATGGCAAGCAGGTCGAAATCAAGAAGGCCGAGCCTCGTGATGGATCTGGC
GGCCAAAACTCCAACAACAGTACCGTGGGAGGCGCCTATGGCAAGCTTGG
TAACGAGTGCAGCCACTGGGGACCGCACCATGCTCCCATCAACATGATGC
AGGGCCAGAATGGCCAGATGGGTGGACCGCCGCTGAATATGCCCATTGGA
GCGCCGAATATGATGCCTGGCTATCAGGGTTGGGGCACCTCGCCGCAGCA
GCAACAATACGGCTACGGCAACAGTGGCCCAGGATCGTACCAGGGATGGG
GAGCTCCACCAGGACCCCAGGGACCACCACCGCAGTGGTCGAACTACGCT
GGACCTCAGCAGACGCAGGGCTACGGCGGATACGACATGTATAACTCGAC
GTCGACCGGAGCTCCTTCGGGACCATCGGGCGGCGGCAGCTGGAACTCGT
GGAACATGCCACCTAACTCTGCCGGACCCACTGGGGCACCAGGAGCCGGA
GCGGGCACCGCCACTGACATGTACTCGCGTGCTCAAGCCTGGGCGACGGG
CGGTCCCTCGACCACTGGACCAGTGGGCGGCATGCCCCGGACCGGACCCG
GTAATTCGGCCTCCAAGTCTGGCTCTGAGTACGACTACGGCGGCTATGGA
TCCGGGTACGACTACGACTACAGCAACTATGTGAAGCAGGAGGGCGCCTC
GAACTACGGAGCAGGGCCGCGATCAGCGTACGGCAACGACAGCTCCACGC
AGCCACCCTATGCAACCTCGCAGGCTGTCTAAAAAGCTTTCTAGACCAT

BS10694.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:44:45
Subject Length Description Subject Range Query Range Score Percent Strand
Hrb27C-RE 1266 CG10377-PE 1..1266 17..1282 6330 100 Plus
Hrb27C-RD 1266 CG10377-PD 1..1266 17..1282 6330 100 Plus
Hrb27C-RH 1266 CG10377-PH 1..1266 17..1282 6330 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:44:46
Subject Length Description Subject Range Query Range Score Percent Strand
Hrb27C-RE 2110 CG10377-RE 253..1520 16..1283 6340 100 Plus
Hrb27C-RD 2137 CG10377-RD 280..1547 16..1283 6340 100 Plus
Hrb27C-RH 8240 CG10377-RH 372..1639 16..1283 6340 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:44:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6924682..6925456 509..1283 3875 100 Plus
2L 23513712 2L 6923905..6924402 16..513 2490 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:44:44 has no hits.

BS10694.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-12 18:08:37 Download gff for BS10694.complete
Subject Subject Range Query Range Percent Splice Strand
Hrb27C-RB 352..1615 17..1280 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:36 Download gff for BS10694.complete
Subject Subject Range Query Range Percent Splice Strand
Hrb27C-RH 373..1636 17..1280 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:53:09 Download gff for BS10694.complete
Subject Subject Range Query Range Percent Splice Strand
Hrb27C-RH 373..1636 17..1280 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:53:09 Download gff for BS10694.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6923906..6924400 17..511 100 -> Plus
2L 6924685..6925453 512..1280 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:36 Download gff for BS10694.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6923906..6924400 17..511 100 -> Plus
arm_2L 6924685..6925453 512..1280 100   Plus

BS10694.pep Sequence

Translation from 16 to 1281

> BS10694.pep
MEEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGF
GFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFL
GGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV
EHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSH
WGPHHAPINMMQGQNGQMGGPPLNMPIGAPNMMPGYQGWGTSPQQQQYGY
GNSGPGSYQGWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAP
SGPSGGGSWNSWNMPPNSAGPTGAPGAGAGTATDMYSRAQAWATGGPSTT
GPVGGMPRTGPGNSASKSGSEYDYGGYGSGYDYDYSNYVKQEGASNYGAG
PRSAYGNDSSTQPPYATSQAV*

BS10694.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:59:18
Subject Length Description Subject Range Query Range Score Percent Strand
Hrb27C-PE 421 CG10377-PE 1..421 1..421 2342 100 Plus
Hrb27C-PD 421 CG10377-PD 1..421 1..421 2342 100 Plus
Hrb27C-PH 421 CG10377-PH 1..421 1..421 2342 100 Plus
Hrb27C-PG 421 CG10377-PG 1..421 1..421 2342 100 Plus
Hrb27C-PF 421 CG10377-PF 1..421 1..421 2342 100 Plus