Clone Sequence Records
BS10770.complete Sequence
3341 bp assembled on 2009-12-07
GenBank Submission: KX802801
> BS10770.complete
GAAGTTATCAGTCGACATGCGGCCACCAATGGCGATGCCATCGATGCAAG
CGTCGACGGGTTTGCAGCCGACTGAAGTGCATCCGGTGCAACAGCTGCAC
TTGCATGCCACGCCCTCAAATCCTTCGGATATACACCAGGATCGGAGTCC
ACACAACCATAACGCCAAACTGCCACCGCTGGAACTGCTGGTGGAGAACA
AGATTAGCTACAGCAGCTACCAGCAGCACGCCAAGGACCTCAAGCACCAG
AGTCACAATCAAAACCGATCCAAGAGAAGTTCCCTCAGCAGTCCCTCGTC
CAGCGAGGATTGCGTTAGTGCTGCCAGGGCCAATATCTTTGATGACGCCG
CCGAGAACTTCGTGATCAATTTCCCCTCGGAGTCGGCCACCTCGCAGCAT
TTGCTGCCACTGTCGGAGACTGTGCCCCTGCTCACCCACATCGAGGCCAC
GGTGGTGGATAAGCAGCGCTCCATAAGGCTGAACAAGAACAGTGCCTCGC
TGATCTTCACGAAGAAGGAACTTAACCAGGGAACCAGGGAACATCATCAT
CAGCACAATAATCAGCAGCACCAGCAGCAGCAACGGCGTCCGCACCATAG
CAGTTTGTACGGAGTGGGCAGGAAGCCGACCAAGCACCTACCGCCAACTA
GAGGACACCACCAGAGGCGCAGTCTACCTCTTAGCTACAACAACAATCTG
GTGACCACCGCTCCATCAGCAGGTGGGGCAGGAGGTCCCGGTGGAGCAGC
CAAACTTGTGCCGCTCAAGCAGCAGCATCAGCACCACGGAGCGGGCCACA
CGGCACCACCCACGGCGAACGTCGTTGTTGCCGGTGGAGCGGGAGCGGCG
GCTCCGTCTGCCCGCAAGCAGCTCTCCTACTCCTGGTACGCGCCCGTCTA
CAGTGCGCTCGAGGAGGAGCTGGAGCAGGACTCGCGGGACTCCTCGCCAA
TCCACAATCTGGCCAACACAAAGCAGCACCAGCGGTCCGCCAGCCAAAAG
GCATCCACCGCCCTGCATGCCACGCCCCGCCACGATCGCGCCCACGATTC
CGCCGACGCCGAGACGGTTGCGCTGCTGGACACGCAGACGCGCAGCAAGA
TCATCATTTCCTCGGCGAATGGTGACGCTGGCGGAGCGGGTGCAGGAGTT
GGATTCGGTGGAGGCGGGGGCGGAGGATCTGGAAACGGCGGAGTACTGGC
AGCGAACGGAGGAGGAGATCTGGAGAGCTCGCTGGGACTATCTGGTGGTG
GGCAATTGCCACGAAGGCGTCGCATCGAGAACTTTCTCAAATCGCTGGTG
GGACTCAAGGCGAGTAGCGGTCGCGGAGGAGGTGGTGGTGGCAATGTTGG
TGGGGGCGGGGCAGTACCAGATCGGGAACGTCCTGCCTCCCCAGAAATTC
GGATCACCCGCACTCCATCCGAGCAGGATGTCGTGCTGCGAGATCCTTCT
GGCCGACAGCTAGCCAACGGCCATGGTCGAGGCAGCCTGAGCATCAGCGG
TTCGAGCAGCTCCTTGAATGTGGTCCAGCAGAAGATATGGCATATCATGC
GACGCGAGGGTAGCGCTAGCAGCTTGCACCAGGAGAAGTCCCAGTCGATT
GTCCAGTACACGGGACTGCGAAAGTGCGAAACGGTCCTAGCACTCACCCG
TCAATCGCAATCGCATGGCCACGTTCACGGCTTGAGCCAGAGTCGAAGTC
AGGGTCACTCCTTGGCGGTCCATGGCAGCGGGATCTTCAGCTCGGGTGGC
GTGGAGCAGATTCGACCACTGAATCGCCTGCGGAACAGCGTGAGCAGCAT
TAACGGCGTGGGTACCTGTTCGCGCTGCTCCAGTCTGTTATCCCTGGCTG
CCTCCGGATCGCGTTACTCCCTGTCGAATGGATTTGCGCCCCGGCCAACT
TCGGCCCTCAATCACCTAGAAGCTGGATGGGAGGACGATCAACGGCGCGC
GCAGGAGCCGCATATCAACGTGAATGCCCAGATCAGACTGAGCGGTGGAG
CAACTGCCAACTCGACCAGTCCCAGTCCGCCGTCCAATGTGACCACGGCC
ACATTGCACTCCAGTTCCGCCAATAATCTGAATCAGGAACCGCAGCAGTC
CACGTCGACGCCCGCCACCACGCCCACTGAGACACCTGGGAGCGGCGAAT
TGGGACCGTTCGGTACCAATCATGCATATCCATTGACCGTAAGCTCCCTG
CTCTCCATGGCCAGTGCGAATCAGGCGGCGCAGGCATGCTGCGTTCGTGA
TGGGATTGCACTGAAGCGACGAGAGATGTTGGCCTCCGCCGATGTCACAC
CTTCGGTGGGCACCCCGGCCACGCCCACCACCGCTTTCAAGCCCTTCACG
TGCAAGCTGTGCCTGATCGATGTGGAGGACGTGGGCGAGGCCATGGCGCT
TCAGCAGTGCGGCTGCCAATTTTGTATCGAGTGCATGCGTGCCTACGTTG
AGTTCGAGATTTCCGAGGGCGCTTACGAGATCTCCTGTCCGGACGCCACG
TGCCCGGCCCAGGGTGCCATTTCCCTGCCCGAGATAGCGAACCTAACTAC
AACGAATCTGCTAAAGAAGCATCATAGATATCGCCTAAATCGAGAAATCG
AATTGGACAAGACGCGCACCTGGTGTCCACGGGCTGGCTGCGAGACCATC
TGCACGGTGGGTGCAGCAGCACAGCCTGGCCAGTCCAGCGTCATTTGCCA
AATGGACGAGTCGCCGTCGACCTCGCAGAGCTACAGTCCACAGCAGGAGG
TGGCCGGAAACGGAAGCACAGGTGCCGCGGCCGGAAACGGAGCTCCCGTT
CTCTCGGTGTCTGTTCACTGTCCCTCTTGCAAGGACGAATTCTGCGGCCT
CTGCAAAAAGGCGTACCATCCGAACATAAGCTGCGACGAGTTTGGAAGAC
GCCTAATTGCCGATGGCCAGGACGACATTGGCATACCGTTCGACAACGAA
CTGATCAAGTGCTGCCCCATGTGCGCGGTGCCCATCGAAAAGGACGAGGG
CTGCGCCCAGATGATGTGCAAGCGCTGCAAGCACGTCTTCTGCTGGTACT
GCCTGGCCAGTTTGGATGATGACTTCCTGCTGCGCCACTACGACAAGGGA
CCGTGCAAGAACAAGCTGGGGCACTCGCGGGCCTCGGTGGTCTGGCATCG
TGCCCAAGTGATTGGGATCTTCGCCGGCTTTGGCATTCTGCTGCTGGTGG
CCTCGCCGCTGCTGCTCTTGGCTGCTCCCTGCATCATCTGCTGCAAGTGC
AGAGGGTGCACCGGGTCCAAGATCGACGAGGTGGACGCCGAACTGGAGGA
GGAGGTCACTGCGCTGCAGGGCTAGAAGCTTTCTAGACCAT
BS10770.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:05:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33144-RB | 3309 | CG33144-PB | 1..3309 | 17..3325 | 16545 | 100 | Plus |
| CG33144-RA | 3309 | CG33144-PA | 1..3309 | 17..3325 | 16545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:05:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33144-RB | 5061 | CG33144-RB | 878..4186 | 17..3325 | 16545 | 100 | Plus |
| CG33144-RA | 4539 | CG33144-RA | 698..4006 | 17..3325 | 16545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:05:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10754909..10756408 | 2431..932 | 7485 | 99.9 | Minus |
| 2R | 25286936 | 2R | 10756529..10757450 | 938..17 | 4610 | 100 | Minus |
| 2R | 25286936 | 2R | 10741581..10741851 | 2863..2593 | 1355 | 100 | Minus |
| 2R | 25286936 | 2R | 10740929..10741186 | 3325..3068 | 1290 | 100 | Minus |
| 2R | 25286936 | 2R | 10741243..10741448 | 3068..2863 | 1030 | 100 | Minus |
| 2R | 25286936 | 2R | 10741911..10742075 | 2594..2430 | 825 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:05:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6822 | 511..597 | 164 | 68.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2323..2512 | 540..730 | 158 | 58.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6729..6895 | 524..696 | 156 | 59.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6913 | 540..734 | 146 | 58.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2377..2510 | 540..672 | 144 | 60.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..7007 | 540..779 | 142 | 55.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2470..2534 | 540..603 | 132 | 72.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2559..2668 | 501..605 | 132 | 63.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1047..1161 | 488..597 | 131 | 62.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1525..1582 | 540..597 | 128 | 69 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6798..6855 | 540..597 | 128 | 69 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2488..2557 | 540..610 | 127 | 66.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1059..1113 | 549..602 | 119 | 70.9 | Plus |
BS10770.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:45:26 Download gff for
BS10770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33144-RA | 674..3982 | 17..3325 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:05:31 Download gff for
BS10770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33144-RA | 698..4006 | 17..3325 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:04:17 Download gff for
BS10770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33144-RA | 674..3982 | 17..3325 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:03:41 Download gff for
BS10770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33144-RA | 698..4006 | 17..3325 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:03:41 Download gff for
BS10770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10740929..10741186 | 3068..3325 | 100 | <- | Minus |
| 2R | 10741244..10741447 | 2864..3067 | 100 | <- | Minus |
| 2R | 10741581..10741849 | 2595..2863 | 100 | <- | Minus |
| 2R | 10741911..10742073 | 2432..2594 | 100 | <- | Minus |
| 2R | 10754909..10756402 | 938..2431 | 100 | <- | Minus |
| 2R | 10756530..10757450 | 17..937 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:05:31 Download gff for
BS10770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6628434..6628691 | 3068..3325 | 100 | <- | Minus |
| arm_2R | 6628749..6628952 | 2864..3067 | 100 | <- | Minus |
| arm_2R | 6629086..6629354 | 2595..2863 | 100 | <- | Minus |
| arm_2R | 6629416..6629578 | 2432..2594 | 100 | <- | Minus |
| arm_2R | 6642414..6643907 | 938..2431 | 100 | <- | Minus |
| arm_2R | 6644035..6644955 | 17..937 | 100 | | Minus |
BS10770.3prime Sequence
855 bp (820 high quality bases) assembled on 2006-04-19
> BS10770.3prime
ATGGTCTAGAAAGCTTCTAGCCCTGCAGCGCAGTGACCTCCTCCTCCAGT
TCGGCGTCCACCTCGTCGATCTTGGACCCGGTGCACCCTCTGCACTTGCA
GCAGATGATGCAGGGAGCAGCCAAGAGCAGCAGCGGCGAGGCCACCAGCA
GCAGAATGCCAAAGCCGGCGAAGATCCCAATCACTTGGGCACGATGCCAG
ACCACCGAGGCCCGCGAGTGCCCCAGCTTGTTCTTGCACGGTCCCTTGTC
GTAGTGGCGCAGCAGGAAGTCATCATCCAAACTGGCCAGGCAGTACCAGC
AGAAGACGTGCTTGCAGCGCTTGCACATCATCTGGGCGCAGCCCTCGTCC
TTTTCGATGGGCACCGCGCACATGGGGCAGCACTTGATCAGTTCGTTGTC
GAACGGTATGCCAATGTCGTCCTGGCCATCGGCAATTAGGCGTCTTCCAA
ACTCGTCGCAGCTTATGTTCGGATGGTACGCCTTTTTGCAGAGGCCGCAG
AATTCGTCCTTGCAAGAGGGACAGTGAACAGACACCGAGAGAACGGGAGC
TCCGTTTCCGGCCGCGGCACCTGTGCTTCCGTTTCCGGCCACCTCCTGCT
GTGGACTGTAGCTCTGCGAGGTCGACGGCGACTCGTCCATTTGGCAAATG
ACGCTGGACTGGCCAGGCTGTGCTGCTGCACCCACCGTGCAGATGGTCTC
GCAGCCAGCCCGTGGACACCAGGTGCGCGTCTTGTCCAATTCGATTTCTC
GATTTAGGCGATATCTATGATGCTTCTTTAGCAGATTCGTTGTAGTTAGG
TTCGCTATCTCGGGCAGGGGAATGGGACCCTGGGCCGGGCACGTGGCGTC
CGGAC
BS10770.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:55:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33144-PA | 3309 | CG33144-RA | 2471..3309 | 855..17 | 4145 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 10:53:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33144-RB | 5061 | CG33144-RB | 3348..4186 | 855..17 | 4165 | 99.8 | Minus |
| CG33144-RA | 4539 | CG33144-RA | 3168..4006 | 855..17 | 4165 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 10:52:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10741581..10741851 | 479..749 | 1355 | 100 | Plus |
| 2R | 25286936 | 2R | 10740929..10741186 | 17..274 | 1290 | 100 | Plus |
| 2R | 25286936 | 2R | 10741243..10741448 | 274..479 | 1030 | 100 | Plus |
| 2R | 25286936 | 2R | 10741911..10742018 | 748..855 | 510 | 98.1 | Plus |
Blast to na_te.dros performed on 2015-02-01 10:52:59 has no hits.
BS10770.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:49:26 Download gff for
BS10770.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33144-PA | 2471..3309 | 17..855 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:13:39 Download gff for
BS10770.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33144-PA | 2471..3309 | 17..855 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:32:25 Download gff for
BS10770.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33144-RA | 3168..4006 | 17..855 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:08:05 Download gff for
BS10770.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33144-RA | 3168..4006 | 17..855 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:08:05 Download gff for
BS10770.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10740929..10741186 | 17..274 | 100 | <- | Plus |
| 2R | 10741244..10741447 | 275..478 | 100 | <- | Plus |
| 2R | 10741581..10741849 | 479..747 | 100 | <- | Plus |
| 2R | 10741911..10742018 | 748..855 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:32:25 Download gff for
BS10770.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6628434..6628691 | 17..274 | 100 | <- | Plus |
| arm_2R | 6628749..6628952 | 275..478 | 100 | <- | Plus |
| arm_2R | 6629086..6629354 | 479..747 | 100 | <- | Plus |
| arm_2R | 6629416..6629523 | 748..855 | 98 | | Plus |
BS10770.5prime Sequence
781 bp (780 high quality bases) assembled on 2006-04-19
> BS10770.5prime
GAAGTTATCAGTCGACATGCGGCCACCAATGGCGATGCCATCGATGCAAG
CGTCGACGGGTTTGCAGCCGACTGAAGTGCATCCGGTGCAACAGCTGCAC
TTGCATGCCACGCCCTCAAATCCTTCGGATATACACCAGGATCGGAGTCC
ACACAACCATAACGCCAAACTGCCACCGCTGGAACTGCTGGTGGAGAACA
AGATTAGCTACAGCAGCTACCAGCAGCACGCCAAGGACCTCAAGCACCAG
AGTCACAATCAAAACCGATCCAAGAGAAGTTCCCTCAGCAGTCCCTCGTC
CAGCGAGGATTGCGTTAGTGCTGCCAGGGCCAATATCTTTGATGACGCCG
CCGAGAACTTCGTGATCAATTTCCCCTCGGAGTCGGCCACCTCGCAGCAT
TTGCTGCCACTGTCGGAGACTGTGCCCCTGCTCACCCACATCGAGGCCAC
GGTGGTGGATAAGCAGCGCTCCATAAGGCTGAACAAGAACAGTGCCTCGC
TGATCTTCACGAAGAAGGAACTTAACCAGGGAACCAGGGAACATCATCAT
CAGCACAATAATCAGCAGCACCAGCAGCAGCAACGGCGTCCGCACCATAG
CAGTTTGTACGGAGTGGGCAGGAAGCCGACCAAGCACCTACCGCCAACTA
GAGGACACCACCAGAGGCGCAGTCTACCTCTTAGCTACAACAACAATCTG
GTGACCACCGCTCCATCAGCAGGTGGGGCAGGAGGTCCCGGTGGAGCAGC
CAAACTTGTGCCGCTCAAGCAGCAGCATCAG
BS10770.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:55:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33144-PA | 3309 | CG33144-RA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:40:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33144-RB | 5061 | CG33144-RB | 878..1642 | 17..781 | 3825 | 100 | Plus |
| CG33144-RA | 4539 | CG33144-RA | 698..1462 | 17..781 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:40:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10756686..10757450 | 781..17 | 3825 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 04:40:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6822 | 511..597 | 164 | 68.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2323..2512 | 540..730 | 158 | 58.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6729..6895 | 524..696 | 156 | 59.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6913 | 540..734 | 146 | 58.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2377..2510 | 540..672 | 144 | 60.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..7007 | 540..779 | 142 | 55.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6944 | 561..776 | 138 | 57.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2470..2534 | 540..603 | 132 | 72.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2559..2668 | 501..605 | 132 | 63.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1047..1161 | 488..597 | 131 | 62.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1525..1582 | 540..597 | 128 | 69 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6798..6855 | 540..597 | 128 | 69 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2488..2557 | 540..610 | 127 | 66.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1059..1113 | 549..602 | 119 | 70.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6870..6917 | 540..584 | 116 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2783..2869 | 511..597 | 111 | 58.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2425..2469 | 540..584 | 108 | 71.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6814..6950 | 538..674 | 107 | 56.8 | Plus |
BS10770.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:49:27 Download gff for
BS10770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33144-PA | 1..765 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:13:41 Download gff for
BS10770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33144-PA | 1..765 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:48:57 Download gff for
BS10770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33144-RA | 696..1462 | 14..781 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:14:47 Download gff for
BS10770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33144-RA | 696..1462 | 14..781 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:14:47 Download gff for
BS10770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10756686..10757452 | 14..781 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:48:57 Download gff for
BS10770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6644191..6644957 | 14..781 | 99 | | Minus |
BS10770.pep Sequence
Translation from 16 to 3324
> BS10770.pep
MRPPMAMPSMQASTGLQPTEVHPVQQLHLHATPSNPSDIHQDRSPHNHNA
KLPPLELLVENKISYSSYQQHAKDLKHQSHNQNRSKRSSLSSPSSSEDCV
SAARANIFDDAAENFVINFPSESATSQHLLPLSETVPLLTHIEATVVDKQ
RSIRLNKNSASLIFTKKELNQGTREHHHQHNNQQHQQQQRRPHHSSLYGV
GRKPTKHLPPTRGHHQRRSLPLSYNNNLVTTAPSAGGAGGPGGAAKLVPL
KQQHQHHGAGHTAPPTANVVVAGGAGAAAPSARKQLSYSWYAPVYSALEE
ELEQDSRDSSPIHNLANTKQHQRSASQKASTALHATPRHDRAHDSADAET
VALLDTQTRSKIIISSANGDAGGAGAGVGFGGGGGGGSGNGGVLAANGGG
DLESSLGLSGGGQLPRRRRIENFLKSLVGLKASSGRGGGGGGNVGGGGAV
PDRERPASPEIRITRTPSEQDVVLRDPSGRQLANGHGRGSLSISGSSSSL
NVVQQKIWHIMRREGSASSLHQEKSQSIVQYTGLRKCETVLALTRQSQSH
GHVHGLSQSRSQGHSLAVHGSGIFSSGGVEQIRPLNRLRNSVSSINGVGT
CSRCSSLLSLAASGSRYSLSNGFAPRPTSALNHLEAGWEDDQRRAQEPHI
NVNAQIRLSGGATANSTSPSPPSNVTTATLHSSSANNLNQEPQQSTSTPA
TTPTETPGSGELGPFGTNHAYPLTVSSLLSMASANQAAQACCVRDGIALK
RREMLASADVTPSVGTPATPTTAFKPFTCKLCLIDVEDVGEAMALQQCGC
QFCIECMRAYVEFEISEGAYEISCPDATCPAQGAISLPEIANLTTTNLLK
KHHRYRLNREIELDKTRTWCPRAGCETICTVGAAAQPGQSSVICQMDESP
STSQSYSPQQEVAGNGSTGAAAGNGAPVLSVSVHCPSCKDEFCGLCKKAY
HPNISCDEFGRRLIADGQDDIGIPFDNELIKCCPMCAVPIEKDEGCAQMM
CKRCKHVFCWYCLASLDDDFLLRHYDKGPCKNKLGHSRASVVWHRAQVIG
IFAGFGILLLVASPLLLLAAPCIICCKCRGCTGSKIDEVDAELEEEVTAL
QG*
BS10770.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33144-PB | 1102 | CG33144-PB | 1..1102 | 1..1102 | 5803 | 100 | Plus |
| CG33144-PA | 1102 | CG33144-PA | 1..1102 | 1..1102 | 5803 | 100 | Plus |
| Smr-PF | 3601 | CG4013-PF | 86..500 | 25..469 | 167 | 21.4 | Plus |
| Smr-PE | 3601 | CG4013-PE | 86..500 | 25..469 | 167 | 21.4 | Plus |
| Smr-PD | 3601 | CG4013-PD | 86..500 | 25..469 | 167 | 21.4 | Plus |
