Clone BS10775 Report

Search the DGRC for BS10775

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:107
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptCG9164-RB
Protein status:BS10775.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS10775.3prime Sequence

894 bp (805 high quality bases) assembled on 2006-04-19

> BS10775.3prime
ATGGTCTAGAAAGCTTCTACGGCTCCTGACGCCCCAGCAATCCGTACACG
ATGCGCCGTCGATTCTGCACCTCCGCTCTCATGGATTCCGTATAGGGATC
GAAAGATAACAGACGTTTCTTCCGCCGGAAGATGCCCTCCTTCCGCATAA
TGGCGCACCGCATCAGTTGCTCGTTGATGGGGAACTGCAGGAAGTCCAGA
ATGGAGCGCAGCTCCCGCTCCGTATGGTGGACCAGGTCGTCGTAGAACAC
CACCTTGATGCTGCCCGTGAAGTTGCGCGCCCAGCTGAGGTTCATCATCT
CCCAGCCCTTGAGCTTGTTGCTCACGAATTGCTGCCAGTATTTTCCCTTG
GTGCGCTTGTAGCGATCCGGTGATGCGAATCCGATGTGACCGCCACTCTG
GCGATTGAACTCCGCGATGATCGCTTTCTCCGGATCGCGGACGAGAAGAA
TTGCTTTCGAGAAGGGCGCCCACGCTTTGCTGCCCCACTCGTGGGTCTTC
ACCAATAATACTGAACTGTTGCAGACGTTCTCCGCCGGAAAGCCGGTCTT
CAGCAGGCCGTAGTCCTTGTAGATGCTGCCCGTCAGGATGCCGGTGGCCT
GCTGGAGCAAGTACCTTAGCCACGTGTTACCGCTGCCAGGAAAACTGGCC
AGGGCGGTCAACGCTGGCAGCGATTGCAGGGCAGCACTGACGTCACTGGG
CAGGGCCGTGTAGAAGTCGGACTTGTAATCCGCGTAGATTGGAAGATCTC
GATTTATGTACTTGAGGTCGCGACACCAGCGTATCGTCATCTTGCGGCTG
GGCATCGGAAACCGAGGACTATGAAAGCTGGGAAACTCGGCGAAACGTTC
GATGCGCGGTCTTTTGGGATGCGATCCGGGTATGGTGTTCATGG

BS10775.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-PC 954 CG9164-RC 77..954 894..17 4365 99.8 Minus
CG9164-PA 954 CG9164-RA 77..954 894..17 4365 99.8 Minus
CG9164-PB 954 CG9164-RB 77..954 894..17 4365 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-RD 4420 CG9164-RD 2838..3717 894..15 4385 99.9 Minus
CG9164-RB 1781 CG9164-RB 199..1078 894..15 4385 99.9 Minus
CG9164-RC 2476 CG9164-RC 626..1505 894..15 4385 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:43:26
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15381802..15382170 340..708 1845 100 Plus
X 23542271 X 15381342..15381666 15..339 1625 100 Plus
X 23542271 X 15382229..15382357 709..837 645 100 Plus
X 23542271 X 15382546..15382604 836..894 280 98.3 Plus
Blast to na_te.dros performed on 2015-02-10 22:43:29 has no hits.

BS10775.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:49:36 Download gff for BS10775.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-PC 77..954 17..894 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:13:56 Download gff for BS10775.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-PB 77..954 17..894 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:57:49 Download gff for BS10775.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-RC 626..1505 15..894 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:07 Download gff for BS10775.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-RC 626..1505 15..894 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:07 Download gff for BS10775.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15382229..15382355 709..835 100 <- Plus
X 15382546..15382604 836..894 98   Plus
X 15381343..15381666 16..339 100 <- Plus
X 15381802..15382170 340..708 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:57:49 Download gff for BS10775.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15276579..15276637 836..894 98   Plus
arm_X 15275376..15275699 16..339 100 <- Plus
arm_X 15275835..15276203 340..708 100 <- Plus
arm_X 15276262..15276388 709..835 100 <- Plus

BS10775.5prime Sequence

908 bp (814 high quality bases) assembled on 2006-04-19

> BS10775.5prime
GAAGTTATCAGTCGACATGGCACTACAAGGCTGGCGCTTTTTCGGTGTCT
CGGCAACCATCATCATCTACATCGGCGGCGTCCTGTTCCTCTCCATGAAC
AACATACCCGGATCGCATCCCAAAAGACCGCGCATCGAACGTTTCGCCGA
GTTTCCCAGCTTTCATAGTCCTCGGTTTCCGATGCCCAGCCGCAAGATGA
CGATACGCTGGTGTCGCGACCTCAAGTACATAAATCGAGATCTTCCAATC
TACGCGGATTACAAGTCCGACTTCTACACGGCCCTGCCCAGTGACGTCAG
TGCTGCCCTGCAATCGCTGCCAGCGTTGACCGCCCTGGCCAGTTTTCCTG
GCAGCGGTAACACGTGGCTAAGGTACTTGCTCCAGCAGGCCACCGGCATC
CTGACGGGCAGCATCTACAAGGACTACGGCCTGCTGAAGACCGGCTTTCC
GGCGGAGAACGTCTGCAACAGTTCAGTATTATTGGTGAAGACCCACGAGT
GGGGCAGCAAAGCGTGGGCGCCCTTCTCGAAAGCAATTCTTCTCGTCCGC
GATCCGGAGAAAGCGATCATCGCGGAGTTCAATCGCCAGAGTGGCGGTCA
CATCGGATTCGCATCACCGGATCGCTACAAGCGCACCAAGGGAAAATACT
GGCAGCAATTCGTGAGCAACAAGCTCAAGGGCTGGGAGATGATGAACCTC
AGCTGGGCGCGCAACTTCACGGGCAGCATCAAGGTGGTGTTCTACGACGA
CCTGGTCCACCATACGGAGCGGGAGCTGCGCTCCATTCTGGACTTCCTGC
AGTTCCCCATCAACGAGCAACTGATGCGGTGCGCCATTATGCGGAAGGAG
GGCATCTTCCGGCGGAAGAAACGTCTGTTATCTTTCGATCCCTATACGGA
ATCCATGA

BS10775.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-PC 954 CG9164-RC 1..892 17..908 4460 100 Plus
CG9164-PA 954 CG9164-RA 1..892 17..908 4460 100 Plus
CG9164-PB 954 CG9164-RB 1..892 17..908 4460 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:51:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-RD 4420 CG9164-RD 2758..3653 13..908 4465 99.9 Plus
CG9164-RB 1781 CG9164-RB 119..1014 13..908 4465 99.9 Plus
CG9164-RC 2476 CG9164-RC 546..1441 13..908 4465 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:51:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15381802..15382170 647..279 1845 100 Minus
X 23542271 X 15381406..15381666 908..648 1305 100 Minus
X 23542271 X 15382546..15382684 151..13 680 99.3 Minus
X 23542271 X 15382229..15382357 278..150 645 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:51:13 has no hits.

BS10775.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:49:37 Download gff for BS10775.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-PC 1..891 17..907 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:13:58 Download gff for BS10775.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-PB 1..891 17..907 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:17:38 Download gff for BS10775.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-RC 546..1440 13..907 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:55:03 Download gff for BS10775.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-RC 546..1440 13..907 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:55:03 Download gff for BS10775.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15382546..15382684 13..151 99   Minus
X 15381407..15381666 648..907 100 <- Minus
X 15381802..15382170 279..647 100 <- Minus
X 15382229..15382355 152..278 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:17:38 Download gff for BS10775.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15275440..15275699 648..907 100 <- Minus
arm_X 15275835..15276203 279..647 100 <- Minus
arm_X 15276262..15276388 152..278 100 <- Minus
arm_X 15276579..15276717 13..151 99   Minus

BS10775.complete Sequence

986 bp assembled on 2006-11-01

GenBank Submission: FJ636732

> BS10775.complete
GAAGTTATCAGTCGACATGGCACTACAAGGCTGGCGCTTTTTCGGTGTCT
CGGCAACCATCATCATCTACATCGGCGGCGTCCTGTTCCTCTCCATGAAC
AACATACCCGGATCGCATCCCAAAAGACCGCGCATCGAACGTTTCGCCGA
GTTTCCCAGCTTTCATAGTCCTCGGTTTCCGATGCCCAGCCGCAAGATGA
CGATACGCTGGTGTCGCGACCTCAAGTACATAAATCGAGATCTTCCAATC
TACGCGGATTACAAGTCCGACTTCTACACGGCCCTGCCCAGTGACGTCAG
TGCTGCCCTGCAATCGCTGCCAGCGTTGACCGCCCTGGCCAGTTTTCCTG
GCAGCGGTAACACGTGGCTAAGGTACTTGCTCCAGCAGGCCACCGGCATC
CTGACGGGCAGCATCTACAAGGACTACGGCCTGCTGAAGACCGGCTTTCC
GGCGGAGAACGTCTGCAACAGTTCAGTATTATTGGTGAAGACCCACGAGT
GGGGCAGCAAAGCGTGGGCGCCCTTCTCGAAAGCAATTCTTCTCGTCCGC
GATCCGGAGAAAGCGATCATCGCGGAGTTCAATCGCCAGAGTGGCGGTCA
CATCGGATTCGCATCACCGGATCGCTACAAGCGCACCAAGGGAAAATACT
GGCAGCAATTCGTGAGCAACAAGCTCAAGGGCTGGGAGATGATGAACCTC
AGCTGGGCGCGCAACTTCACGGGCAGCATCAAGGTGGTGTTCTACGACGA
CCTGGTCCACCATACGGAGCGGGAGCTGCGCTCCATTCTGGACTTCCTGC
AGTTCCCCATCAACGAGCAACTGATGCGGTGCGCCATTATGCGGAAGGAG
GGCATCTTCCGGCGGAAGAAACGTCTGTTATCTTTCGATCCCTATACGGA
ATCCATGAGAGCGGAGGTGCAGAATCGACGGCGCATCGTGTACGGATTGC
TGGGGCGTCAGGAGCCGTAGAAGCTTTCTAGACCAT

BS10775.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:42:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-RD 954 CG9164-PD 1..954 17..970 4770 100 Plus
CG9164-RB 954 CG9164-PB 1..954 17..970 4770 100 Plus
CG9164-RC 954 CG9164-PC 1..954 17..970 4770 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:42:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-RD 4420 CG9164-RD 2758..3717 13..972 4785 99.9 Plus
CG9164-RB 1781 CG9164-RB 119..1078 13..972 4785 99.9 Plus
CG9164-RC 2476 CG9164-RC 546..1505 13..972 4785 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:42:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15381802..15382170 647..279 1845 100 Minus
X 23542271 X 15381342..15381666 972..648 1625 100 Minus
X 23542271 X 15382546..15382684 151..13 680 99.3 Minus
X 23542271 X 15382229..15382357 278..150 645 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:42:15 has no hits.

BS10775.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:53:09 Download gff for BS10775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9164-RB 1..954 17..970 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:55:34 Download gff for BS10775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9164-RB 119..1078 13..972 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:20:49 Download gff for BS10775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9164-RC 550..1503 17..970 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:53:09 Download gff for BS10775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9164-RB 119..1078 13..972 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:15:30 Download gff for BS10775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9164-RC 550..1503 17..970 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:30 Download gff for BS10775.complete
Subject Subject Range Query Range Percent Splice Strand
X 15381344..15381666 648..970 100 <- Minus
X 15381802..15382170 279..647 100 <- Minus
X 15382229..15382355 152..278 100 <- Minus
X 15382546..15382680 17..151 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:20:49 Download gff for BS10775.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15275377..15275699 648..970 100 <- Minus
arm_X 15275835..15276203 279..647 100 <- Minus
arm_X 15276262..15276388 152..278 100 <- Minus
arm_X 15276579..15276713 17..151 100   Minus

BS10775.pep Sequence

Translation from 16 to 969

> BS10775.pep
MALQGWRFFGVSATIIIYIGGVLFLSMNNIPGSHPKRPRIERFAEFPSFH
SPRFPMPSRKMTIRWCRDLKYINRDLPIYADYKSDFYTALPSDVSAALQS
LPALTALASFPGSGNTWLRYLLQQATGILTGSIYKDYGLLKTGFPAENVC
NSSVLLVKTHEWGSKAWAPFSKAILLVRDPEKAIIAEFNRQSGGHIGFAS
PDRYKRTKGKYWQQFVSNKLKGWEMMNLSWARNFTGSIKVVFYDDLVHHT
ERELRSILDFLQFPINEQLMRCAIMRKEGIFRRKKRLLSFDPYTESMRAE
VQNRRRIVYGLLGRQEP*

BS10775.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:49:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-PD 317 CG9164-PD 1..317 1..317 1679 100 Plus
CG9164-PB 317 CG9164-PB 1..317 1..317 1679 100 Plus
CG9164-PC 317 CG9164-PC 1..317 1..317 1679 100 Plus