Clone BS10812 Report

Search the DGRC for BS10812

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:108
Well:12
Vector:pDNR-Dual
Associated Gene/TranscriptMvl-RB
Protein status:BS10812.pep: full length peptide match
Sequenced Size:1823

Clone Sequence Records

BS10812.complete Sequence

1823 bp assembled on 2009-12-07

GenBank Submission: KX801219

> BS10812.complete
GAAGTTATCAGTCGACATGTCTTCGAATGAGGCCTACCACGAGCCGGGTG
CCGGTGGAGATGGACCGGGCGGATCGTCTGGCGCATCCGGCGGAGGAAGT
CAGCGGAGCAACCAGCTGCACCACCAGCAGATACTCAACGAGACGACCTA
CCTGAAACCCGCCGCCAAGCAGGCCTACTTTAGCGACGAGAAGGTCCTCA
TACCCGACGATGATAGCACAAACGTGGGTTTCAGCTTTCGCAAGCTGTGG
GCCTTCACGGGACCCGGTTTTCTTATGTCCATTGCGTATCTGGACCCCGG
CAACATCGAATCCGATATGCAGTCTGGTGCGGCGGCCAAGTACAAGATCT
TGTGGGTCTTGCTGTGGGCCACAGTCCTAGGTCTGCTCATGCAACGCTTG
GCTGCAAGACTGGGCGTGGTTACAGGCCTGCATCTGGCCGAGATGTGCTA
CAGACAGTACAAGCGTCTGCCACGTTGGATACTGTGGATAATGATAGAGA
TAGCCATTATTGGATCCGACATGCAGGAGGTCATTGGCACGGCCATTGCC
ATATACCTGCTGTCCAACAAAGTAGTGCCTTTGTGGGGCGGAGTGTTGAT
CACCATTGTTGACACGTTCACGTTCCTGTTTCTGGACAAGTACGGTCTAC
GCAAGCTGGAGTTCCTATTCGGCACCCTCATCACCATTATGGCTGTCTCA
TTCGGCTATGAGTACATTGTATCAGCCCCTAATCAAGGAGAAGTTCTCGA
GGGAATGTTTGTGCCCTGGTGCTCTAACTGCAATTCGAATGTGTTGCTGC
AGGCCGTGGGTGTCGTGGGTGCTGTTATTATGCCGCACAATCTCTACCTG
CATTCCGCCTTGGTTAAGTCCCGCGATATAGACCGTCGCCAGACAAAGAA
AGTTAGTGAGGCGAATTTTTACTTCTTCATCGAGGCGTCGGTAGCCTTGT
TTGTGTCCTTCATCATTAACCTGTTTGTGGTGGCTGTGTTTGCCCATGGC
ATGTATGGCAAAACTAATAATGATGTGGTTGAAGTGTGTAAAGACAAGTC
GATGTACGAAGATGCCAAAATGTCTTTTGTGGACAATGTAAATGGAACCG
CGATCATCGATGCAGATCTATACAAGGGCGGACTTTTCCTTGGCTGCACA
TTTGGAGCTGTCGCCATGTACATTTGGGGTGTGGGCATTCTAGCTGCTGG
CCAGAGTTCCACCATGACGGGCACCTATGCCGGTCAGTTCTCAATGGAAG
GCTTCTTGAATCTGCAGTGGCCGCGCTGGTGTCGCGTGCTGGTCACGCGC
TGCATTGCCATTATTCCCACCTTCTGCCTGGCCATGTTCAGCAAGATGGA
AGATTTGACTAGCATGAACGATATCCTGAATGCGGTGATGTCGCTCCAGC
TGCCATTCGCTGCCATACCCACCATCGCCTTCACCTCGTGCGCCGCCATA
ATGGGCGAGTTTGTTAATGGACTGGGCAACAAAATCGTATCCATACTGCT
CACCATTGTAGTGATTGGCGTTAATTTGTACTTTGTGGTGGTGCAAGTAG
AGAATATGGAAATTAAAGGCGGCTTGCTGGCACTAGTCTGTATTTTTGCC
ATTTTGTATATACTGTTCAACCTCTACCTTGTGATACACATGGCTGCCTG
CATGGGCAATCAGCGTTTGATGAACAGCCGGTGGGTGCAGCGTTTTGTGT
TGCCAAGCCAGAACAGCTTTTCGATAAAGAACGCCAACTCGACGTACGCC
AGGATTGCCACGAGTTCGGACCAGGAACCGGAGGGCTTGGCTGGTGAGGA
TGCGTAGAAGCTTTCTAGACCAT

BS10812.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:14:58
Subject Length Description Subject Range Query Range Score Percent Strand
Mvl-RH 1920 CG3671-PH 1..1791 17..1807 8955 100 Plus
Mvl-RE 1791 CG3671-PE 1..1791 17..1807 8955 100 Plus
Mvl-RD 1791 CG3671-PD 1..1791 17..1807 8955 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:14:59
Subject Length Description Subject Range Query Range Score Percent Strand
Mvl-RE 2790 CG3671-RE 372..2164 15..1807 8965 100 Plus
Mvl-RH 2653 CG3671-RH 57..1848 16..1807 8960 100 Plus
Mvl-RD 4782 CG3671-RD 2186..3977 16..1807 8960 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:14:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21055963..21056410 1474..1027 2240 100 Minus
3R 32079331 3R 21058259..21058468 225..16 1050 100 Minus
3R 32079331 3R 21058016..21058200 408..224 925 100 Minus
3R 32079331 3R 21057787..21057953 573..407 835 100 Minus
3R 32079331 3R 21056466..21056628 1029..867 815 100 Minus
3R 32079331 3R 21056695..21056852 868..711 790 100 Minus
3R 32079331 3R 21057576..21057714 712..574 695 100 Minus
3R 32079331 3R 21055785..21055902 1591..1474 590 100 Minus
3R 32079331 3R 21055632..21055723 1681..1590 460 100 Minus
3R 32079331 3R 21055344..21055416 1753..1681 365 100 Minus
3R 32079331 3R 21052188..21052245 1807..1750 290 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:14:57 has no hits.

BS10812.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:47:24 Download gff for BS10812.complete
Subject Subject Range Query Range Percent Splice Strand
Mvl-RA 374..2164 17..1807 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:09:41 Download gff for BS10812.complete
Subject Subject Range Query Range Percent Splice Strand
Mvl-RE 374..2164 17..1807 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:12:30 Download gff for BS10812.complete
Subject Subject Range Query Range Percent Splice Strand
Mvl-RA 374..2164 17..1807 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:18 Download gff for BS10812.complete
Subject Subject Range Query Range Percent Splice Strand
Mvl-RE 374..2164 17..1807 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:18 Download gff for BS10812.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21056695..21056850 713..868 100 <- Minus
3R 21057576..21057714 574..712 100 <- Minus
3R 21057787..21057951 409..573 100 <- Minus
3R 21058016..21058200 224..408 100 <- Minus
3R 21058261..21058467 17..223 100   Minus
3R 21055964..21056409 1028..1473 100 <- Minus
3R 21052188..21052242 1753..1807 100 <- Minus
3R 21055345..21055415 1682..1752 100 <- Minus
3R 21055632..21055723 1590..1681 100 <- Minus
3R 21055787..21055902 1474..1589 100 <- Minus
3R 21056468..21056626 869..1027 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:09:41 Download gff for BS10812.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16877910..16877964 1753..1807 100 <- Minus
arm_3R 16881067..16881137 1682..1752 100 <- Minus
arm_3R 16881354..16881445 1590..1681 100 <- Minus
arm_3R 16881509..16881624 1474..1589 100 <- Minus
arm_3R 16881686..16882131 1028..1473 100 <- Minus
arm_3R 16882190..16882348 869..1027 100 <- Minus
arm_3R 16882417..16882572 713..868 100 <- Minus
arm_3R 16883298..16883436 574..712 100 <- Minus
arm_3R 16883509..16883673 409..573 100 <- Minus
arm_3R 16883738..16883922 224..408 100 <- Minus
arm_3R 16883983..16884189 17..223 100   Minus

BS10812.3prime Sequence

919 bp (826 high quality bases) assembled on 2006-04-19

> BS10812.3prime
ATGGTCTAGAAAGCTTCTACGCATCCTCACCAGCCAAGCCCTCCGGTTCC
TGGTCCGAACTCGTGGCAATCCTGGCGTACGTCGAGTTGGCGTTCTTTAT
CGAAAAGCTGTTCTGGCTTGGCAACACAAAACGCTGCACCCACCGGCTGT
TCATCAAACGCTGATTGCCCATGCAGGCAGCCATGTGTATCACAAGGTAG
AGGTTGAACAGTATATACAAAATGGCAAAAATACAGACTAGTGCCAGCAA
GCCGCCTTTAATTTCCATATTCTCTACTTGCACCACCACAAAGTACAAAT
TAACGCCAATCACTACAATGGTGAGCAGTATGGATACGATTTTGTTGCCC
AGTCCATTAACAAACTCGCCCATTATGGCGGCGCACGAGGTGAAGGCGAT
GGTGGGTATGGCAGCGAATGGCAGCTGGAGCGACATCACCGCATTCAGGA
TATCGTTCATGCTAGTCAAATCTTCCATCTTGCTGAACATGGCCAGGCAG
AAGGTGGGAATAATGGCAATGCAGCGCGTGACCAGCACGCGACACCAGCG
CGGCCACTGCAGATTCAAGAAGCCTTCCATTGAGAACTGACCGGCATAGG
TGCCCGTCATGGTGGAACTCTGGCCAGCAGCTAGAATGCCCACACCCCAA
ATGTACATGGCGACAGCTCCAAATGTGCAGCCAAGGAAAAGTCCGCCCTT
GTATAGATCTGCATCGATGATCGCGGTTCCATTTACATTGTCCACAAAAG
ACATTTTGGCATCTTCGTACATCGACTTGTCTTTACACACTTCAACCACA
TCATTATTAGTTTTGCCATACATGCCATGGGCAAACACAGCCACCACAAA
CAGGTTAATGATGAGGGACACAAAACAAGCTACCGACGCCTCGATGAGGA
AGTAAAAAATCGCCTCACT

BS10812.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:56:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG3671-PB 1791 Mvl-RB 934..1791 874..17 4265 99.8 Minus
CG3671-PA 1791 Mvl-RA 934..1791 874..17 4265 99.8 Minus
CG3671-PC 1461 Mvl-RC 934..1458 874..350 2600 99.8 Minus
CG3671-PB 1791 Mvl-RB 889..929 919..879 155 95.1 Minus
CG3671-PA 1791 Mvl-RA 889..929 919..879 155 95.1 Minus
CG3671-PC 1461 Mvl-RC 889..929 919..879 155 95.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:15:25
Subject Length Description Subject Range Query Range Score Percent Strand
Mvl-RH 2653 CG3671-RH 946..1848 919..17 4425 99.4 Minus
Mvl-RE 2790 CG3671-RE 1262..2164 919..17 4425 99.4 Minus
Mvl-RD 4782 CG3671-RD 3075..3977 919..17 4425 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:15:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21055963..21056410 350..797 2240 100 Plus
3R 32079331 3R 21055785..21055902 233..350 590 100 Plus
3R 32079331 3R 21056466..21056590 795..919 535 95.2 Plus
3R 32079331 3R 21055632..21055723 143..234 460 100 Plus
3R 32079331 3R 21055344..21055416 71..143 365 100 Plus
3R 32079331 3R 21052188..21052245 17..74 290 100 Plus
Blast to na_te.dros performed on 2015-02-10 20:15:24 has no hits.

BS10812.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:50:34 Download gff for BS10812.3prime
Subject Subject Range Query Range Percent Splice Strand
Mvl-PB 889..1791 17..919 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:15:17 Download gff for BS10812.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3671-PA 889..1791 17..919 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 20:35:20 Download gff for BS10812.3prime
Subject Subject Range Query Range Percent Splice Strand
Mvl-RD 3075..3982 10..919 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:00:16 Download gff for BS10812.3prime
Subject Subject Range Query Range Percent Splice Strand
Mvl-RD 3075..3982 10..919 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:00:16 Download gff for BS10812.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 21052183..21052242 10..71 93 <- Plus
3R 21055345..21055415 72..142 100 <- Plus
3R 21055632..21055723 143..234 100 <- Plus
3R 21055787..21055902 235..350 100 <- Plus
3R 21055964..21056409 351..796 100 <- Plus
3R 21056468..21056590 797..919 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 20:35:20 Download gff for BS10812.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16877905..16877964 10..71 93 <- Plus
arm_3R 16881067..16881137 72..142 100 <- Plus
arm_3R 16881354..16881445 143..234 100 <- Plus
arm_3R 16881509..16881624 235..350 100 <- Plus
arm_3R 16881686..16882131 351..796 100 <- Plus
arm_3R 16882190..16882312 797..919 95   Plus

BS10812.5prime Sequence

918 bp (749 high quality bases) assembled on 2006-04-19

> BS10812.5prime
GAAGTTATCAGTCGACATGTCTTCGAATGAGGCCTACCACGAGCCGGGTG
CCGGTGGAGATGGACCGGGCGGATCGTCTGGCGCATCCGGCGGAGGAAGT
CAGCGGAGCAACCAGCTGCACCACCAGCAGATACTCAACGAGACGACCTA
CCTGAAACCCGCCGCCAAGCAGGCCTACTTTAGCGACGAGAAGGTCCTCA
TACCCGACGATGATAGCACAAACGTGGGTTTCAGCTTTCGCAAGCTGTGG
GCCTTCACGGGACCCGGTTTTCTTATGTCCATTGCGTATCTGGACCCCGG
CAACATCGAATCCGATATGCAGTCTGGTGCGGCGGCCAAGTACAAGATCT
TGTGGGTCTTGCTGTGGGCCACAGTCCTAGGTCTGCTCATGCAACGCTTG
GCTGCAAGACTGGGCGTGGTTACAGGCCTGCATCTGGCCGAGATGTGCTA
CAGACAGTACAAGCGTCTGCCACGTTGGATACTGTGGATAATGATAGAGA
TAGCCATTATTGGATCCGACATGCAGGAGGTCATTGGCACGGCCATTGCC
ATATACCTGCTGTCCAACAAAGTAGTGCCTTTGTGGGGCGGAGTGTTGAT
CACCATTGTTGACACGTTCACGTTCCTGTTTCTGGACAAGTACGGTCTAC
GCAAGCTGGAGTTCCTATTCGGCACCCTCATCACCATTATGGCTGTCTCA
TTCGGCTATGAGTACATTGTATCAGCCCCTAATCAAGGAGAAGTTCTCGA
GGGGATGTTTGTGCCCTGGTGCTCTAACTGCAATTCGAATGTGTTGCTGC
AGGCCGTGGGTGTCGTGGGTGCTGTTATTATGCCGCACAATCTCTACCTG
CATTCCGCCTTGGTTAAGTCCCGCGATATAGACCGTCGCCAGACAAAGAA
AGTTAGTGAGGCGAATTT

BS10812.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:56:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG3671-PB 1791 Mvl-RB 1..902 17..918 4485 99.8 Plus
CG3671-PA 1791 Mvl-RA 1..902 17..918 4485 99.8 Plus
CG3671-PC 1461 Mvl-RC 1..902 17..918 4485 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:46:51
Subject Length Description Subject Range Query Range Score Percent Strand
Mvl-RF 2503 CG3671-RF 372..1275 15..918 4505 99.9 Plus
Mvl-RE 2790 CG3671-RE 372..1275 15..918 4505 99.9 Plus
Mvl-RG 2221 CG3671-RG 70..972 16..918 4500 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:46:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21058259..21058468 225..16 1050 100 Minus
3R 32079331 3R 21058016..21058200 408..224 925 100 Minus
3R 32079331 3R 21057787..21057953 573..407 835 100 Minus
3R 32079331 3R 21056695..21056852 868..711 775 99.4 Minus
3R 32079331 3R 21057576..21057714 712..574 695 100 Minus
3R 32079331 3R 21056577..21056628 918..867 260 100 Minus
Blast to na_te.dros performed on 2015-02-11 18:46:49 has no hits.

BS10812.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:50:35 Download gff for BS10812.5prime
Subject Subject Range Query Range Percent Splice Strand
Mvl-PB 1..902 17..918 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:15:18 Download gff for BS10812.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3671-PC 1..902 17..918 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 16:39:24 Download gff for BS10812.5prime
Subject Subject Range Query Range Percent Splice Strand
Mvl-RE 372..1275 15..918 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:55:07 Download gff for BS10812.5prime
Subject Subject Range Query Range Percent Splice Strand
Mvl-RE 372..1275 15..918 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:55:07 Download gff for BS10812.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 21058016..21058200 224..408 100 <- Minus
3R 21058261..21058477 8..223 98   Minus
3R 21056577..21056626 869..918 100 <- Minus
3R 21056695..21056850 713..868 99 <- Minus
3R 21057576..21057714 574..712 100 <- Minus
3R 21057787..21057951 409..573 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 16:39:24 Download gff for BS10812.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16882299..16882348 869..918 100 <- Minus
arm_3R 16882417..16882572 713..868 99 <- Minus
arm_3R 16883298..16883436 574..712 100 <- Minus
arm_3R 16883509..16883673 409..573 100 <- Minus
arm_3R 16883738..16883922 224..408 100 <- Minus
arm_3R 16883983..16884199 8..223 98   Minus

BS10812.pep Sequence

Translation from 16 to 1806

> BS10812.pep
MSSNEAYHEPGAGGDGPGGSSGASGGGSQRSNQLHHQQILNETTYLKPAA
KQAYFSDEKVLIPDDDSTNVGFSFRKLWAFTGPGFLMSIAYLDPGNIESD
MQSGAAAKYKILWVLLWATVLGLLMQRLAARLGVVTGLHLAEMCYRQYKR
LPRWILWIMIEIAIIGSDMQEVIGTAIAIYLLSNKVVPLWGGVLITIVDT
FTFLFLDKYGLRKLEFLFGTLITIMAVSFGYEYIVSAPNQGEVLEGMFVP
WCSNCNSNVLLQAVGVVGAVIMPHNLYLHSALVKSRDIDRRQTKKVSEAN
FYFFIEASVALFVSFIINLFVVAVFAHGMYGKTNNDVVEVCKDKSMYEDA
KMSFVDNVNGTAIIDADLYKGGLFLGCTFGAVAMYIWGVGILAAGQSSTM
TGTYAGQFSMEGFLNLQWPRWCRVLVTRCIAIIPTFCLAMFSKMEDLTSM
NDILNAVMSLQLPFAAIPTIAFTSCAAIMGEFVNGLGNKIVSILLTIVVI
GVNLYFVVVQVENMEIKGGLLALVCIFAILYILFNLYLVIHMAACMGNQR
LMNSRWVQRFVLPSQNSFSIKNANSTYARIATSSDQEPEGLAGEDA*

BS10812.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:49:48
Subject Length Description Subject Range Query Range Score Percent Strand
Mvl-PH 639 CG3671-PH 1..596 1..596 3076 100 Plus
Mvl-PE 596 CG3671-PE 1..596 1..596 3076 100 Plus
Mvl-PD 596 CG3671-PD 1..596 1..596 3076 100 Plus
Mvl-PB 596 CG3671-PB 1..596 1..596 3076 100 Plus
Mvl-PG 607 CG3671-PG 1..585 1..585 2992 99.1 Plus