Clone Sequence Records
BS10845.3prime Sequence
905 bp (827 high quality bases) assembled on 2006-04-19
> BS10845.3prime
ATGGTCTAGAAAGCTTTTACTGTTGTGAGCTCGCCAGCTGCTGCTGCTGC
TGAGCTGCGGCCGCAGTTGCATTGCCAGGTGGCGGCGGCGATGGCTGCTG
CTGCTGCAGCTGGTGTGAGGTCGCTGCCGTCGACGCCTGCTGCTGATGGT
GTGCAGGCGGCGTCGACGATGACGACGCCGACGACACAGGCTGATGATGC
AATTGCGGCGGCAGTGCCTGTTGTTGAGATGGCGACTGTGGCTGTTGCTG
CTGGGAACCGCTGGACGCGGCTCCGGCTAGGCTCTGTTGCTGTTGTTGCA
ATTGTTCTTTGGCAGCTTTCTGTTTTTTGGTTATTGGCGGCGGATTTGTC
GAAAGCATCATGGCTCGGATGCGTCGCTGGGCAGACTGTACACTGTAGAA
TAGTCCGATGATGTGCACTGGTGTCTCTTCATCTCCACCGGATGGCGGTG
CAAGGGCATGTTCGGGCAATTTGATCACACTGCCCGTCACGCGCTGCAAT
TCCCGCACATTTTGGCCACCCTTGCCAATGATACGGCCCACCTGAGAACT
GGCCACAAGCAACTCAACCGTGAGGCGCACATCGTCCGTGCCACACATGA
AGCCTTCTTCGCGCATCTTCTCGAAGATCATGTACTGCGCCTTCCACTGA
CCCTCCGGTGTGCCAACAATCGTCACCTTGCGCTCCGTTTGTTGGTCCAG
CGGCTTGTCGGCGTCGAGGGGGGCTATTTTAAGGGATGCGTTCGAGAAGC
GCATTATGCTTCGGATATGCGAGCCCCTGGTGCCGATAATGGCGCCGACA
GCGTTGTTGGGTATGTAGAGATAGGTGGTTTCCTGTAGGTCATTGGGGAA
GACCGGTGGCACCACACTAGCCGGAGTCTTGGACATGGCAAAGCTTTGAC
ACGAG
BS10845.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:57:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1691-PI | 1767 | Imp-RI | 879..1767 | 905..17 | 4395 | 99.7 | Minus |
| CG1691-PB | 1701 | Imp-RB | 813..1701 | 905..17 | 4395 | 99.7 | Minus |
| CG1691-PA | 1701 | Imp-RA | 813..1701 | 905..17 | 4395 | 99.7 | Minus |
| CG1691-PF | 1722 | Imp-RF | 834..1722 | 905..17 | 4395 | 99.7 | Minus |
| CG1691-PH | 1722 | Imp-RH | 834..1722 | 905..17 | 4395 | 99.7 | Minus |
| CG1691-PG | 1722 | Imp-RG | 834..1722 | 905..17 | 4395 | 99.7 | Minus |
| CG1691-PD | 1722 | Imp-RD | 834..1722 | 905..17 | 4395 | 99.7 | Minus |
| CG1691-PE | 1722 | Imp-RE | 834..1722 | 905..17 | 4395 | 99.7 | Minus |
| CG1691-PC | 1701 | Imp-RC | 813..1701 | 905..17 | 4395 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:11:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Imp-RL | 4220 | CG1691-RL | 2260..3148 | 905..17 | 4415 | 99.8 | Minus |
| Imp-RB | 2863 | CG1691-RB | 1119..2007 | 905..17 | 4415 | 99.8 | Minus |
| Imp-RK | 3468 | CG1691-RK | 1508..2396 | 905..17 | 4415 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 11:11:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10797069..10797442 | 17..390 | 1870 | 100 | Plus |
| X | 23542271 | X | 10797834..10798199 | 540..905 | 1815 | 99.7 | Plus |
| X | 23542271 | X | 10797508..10797666 | 386..544 | 780 | 99.4 | Plus |
Blast to na_te.dros performed 2015-02-01 11:11:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6920 | 256..54 | 210 | 59.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6911 | 253..82 | 209 | 60.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6729..7001 | 309..37 | 204 | 58 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2537 | 306..73 | 203 | 58.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6923 | 304..88 | 188 | 58.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2424 | 148..37 | 179 | 66.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..7063 | 348..8 | 171 | 56 | Minus |
BS10845.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:51:29 Download gff for
BS10845.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-PC | 813..1701 | 17..905 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:16:36 Download gff for
BS10845.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1691-PC | 813..1701 | 17..905 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:35:14 Download gff for
BS10845.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RK | 1508..2396 | 17..905 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:10:14 Download gff for
BS10845.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RK | 1508..2396 | 17..905 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:10:14 Download gff for
BS10845.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10797069..10797437 | 17..385 | 100 | <- | Plus |
| X | 10797508..10797663 | 386..541 | 99 | <- | Plus |
| X | 10797836..10798199 | 542..905 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:35:14 Download gff for
BS10845.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10691102..10691470 | 17..385 | 100 | <- | Plus |
| arm_X | 10691541..10691696 | 386..541 | 99 | <- | Plus |
| arm_X | 10691869..10692232 | 542..905 | 99 | | Plus |
BS10845.5prime Sequence
875 bp (833 high quality bases) assembled on 2006-04-19
> BS10845.5prime
GAAGTTATCAGTCGACATGCACAGCAACAATAATAGCAGCAGACTCAACA
ACAACATAAGCAACAATTATTATCAACAAAAACAATCGCTTATACGCTAT
TTGGATCGAGCTGCTGTTGGTCTGAACGGTGTCGAGTTCGAGGGCAGCAA
GCTGCATGCCGAGCAGCTGGACAAGAACCAGCGGCGTAGCCAGCGTAACC
AGCGCAATCCGTATCCGGGTATGCCCGGTCCCGGACGCCAGGCGGACTTT
CCGCTGCGCATTCTTGTGCAGAGCGAAATGGTGGGCGCCATCATTGGTCG
ACAGGGCAGCACCATCAGGACGATCACACAACAGAGCCGTGCTCGCGTCG
ACGTCCATCGTAAGGAGAATGTTGGATCGCTGGAGAAATCGATTACGATC
TATGGCAATCCGGAGAACTGCACCAACGCCTGTAAGCGCATCCTGGAAGT
TATGCAGCAGGAGGCCATCTCTACGAATAAGGGTGAAATTTGCCTCAAAA
TACTCGCCCACAACAATTTGATTGGACGAATCATTGGCAAGTCGGGCAAT
ACCATTAAACGGATCATGCAGGACACCGATACGAAGATCACTGTCAGCTC
TATCAACGACATCAACAGCTTCAATTTGGAGCGAATCATTACGGTCAAGG
GATTAATTGAGAACATGTCGCGTGCTGAGAACCAAATTAGCACCAAGCTG
CGCCAGAGCTACGAGAACGATCTGCAGGCGATGGCGCCGCAGAGCCTCAT
GTTCCCCGGTCTCCATCCGATGGCAATGATGTCGACACCGGGCAACGGCA
TGGTCTTCAATACGAGCATGCCGTTCCCCTCGTGTCNAAGCTTTGCCATG
TCAAAGACTCCGGCTAGTGTGGTGG
BS10845.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:57:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1691-PB | 1701 | Imp-RB | 1..858 | 17..874 | 4246 | 99.7 | Plus |
| CG1691-PA | 1701 | Imp-RA | 1..858 | 17..874 | 4246 | 99.7 | Plus |
| CG1691-PC | 1701 | Imp-RC | 1..858 | 17..874 | 4246 | 99.7 | Plus |
| CG1691-PF | 1722 | Imp-RF | 113..879 | 108..874 | 3791 | 99.7 | Plus |
| CG1691-PH | 1722 | Imp-RH | 113..879 | 108..874 | 3791 | 99.7 | Plus |
| CG1691-PG | 1722 | Imp-RG | 113..879 | 108..874 | 3791 | 99.7 | Plus |
| CG1691-PD | 1722 | Imp-RD | 113..879 | 108..874 | 3791 | 99.7 | Plus |
| CG1691-PE | 1722 | Imp-RE | 113..879 | 108..874 | 3791 | 99.7 | Plus |
| CG1691-PI | 1767 | Imp-RI | 533..924 | 483..874 | 1916 | 99.4 | Plus |
| CG1691-PI | 1767 | Imp-RI | 137..516 | 108..487 | 1900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:35:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Imp-RB | 2863 | CG1691-RB | 307..1164 | 17..874 | 4264 | 99.8 | Plus |
| Imp-RA | 3300 | CG1691-RA | 528..1385 | 17..874 | 4264 | 99.8 | Plus |
| Imp-RC | 6762 | CG1691-RC | 501..1358 | 17..874 | 4264 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:34:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10798154..10798545 | 874..483 | 1934 | 99.5 | Minus |
| X | 23542271 | X | 10798619..10798994 | 483..108 | 1880 | 100 | Minus |
| X | 23542271 | X | 10805266..10805357 | 108..17 | 460 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 21:35:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2374..2450 | 7..85 | 146 | 68.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2396..2458 | 21..84 | 137 | 70.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2366..2429 | 21..85 | 133 | 69.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2374 | 22..84 | 132 | 69.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2445..2486 | 25..66 | 120 | 76.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2951..2998 | 21..65 | 116 | 75 | Plus |
| BS | 5142 | BS BS 5142bp | 2037..2076 | 29..68 | 110 | 75 | Plus |
BS10845.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:51:30 Download gff for
BS10845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-PC | 1..858 | 17..875 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:16:38 Download gff for
BS10845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1691-PC | 1..858 | 17..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:30:56 Download gff for
BS10845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 495..1358 | 9..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:01:45 Download gff for
BS10845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 495..1358 | 9..875 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:01:45 Download gff for
BS10845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10798153..10798544 | 484..875 | 99 | <- | Minus |
| X | 10798619..10798993 | 109..483 | 100 | <- | Minus |
| X | 10805266..10805363 | 9..108 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:30:56 Download gff for
BS10845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10692186..10692577 | 484..875 | 99 | <- | Minus |
| arm_X | 10692652..10693026 | 109..483 | 100 | <- | Minus |
| arm_X | 10699299..10699396 | 9..108 | 96 | | Minus |
BS10845.complete Sequence
1733 bp assembled on 2007-10-26
GenBank Submission: FJ636737
> BS10845.complete
GAAGTTATCAGTCGACATGCACAGCAACAATAATAGCAGCAGACTCAACA
ACAACATAAGCAACAATTATTATCAACAAAAACAATCGCTTATACGCTAT
TTGGATCGAGCTGCTGTTGGTCTGAACGGTGTCGAGTTCGAGGGCAGCAA
GCTGCATGCCGAGCAGCTGGACAAGAACCAGCGGCGTAGCCAGCGTAACC
AGCGCAATCCGTATCCGGGTATGCCCGGTCCCGGACGCCAGGCGGACTTT
CCGCTGCGCATTCTTGTGCAGAGCGAAATGGTGGGCGCCATCATTGGTCG
ACAGGGCAGCACCATCAGGACGATCACACAACAGAGCCGTGCTCGCGTCG
ACGTCCATCGTAAGGAGAATGTTGGATCGCTGGAGAAATCGATTACGATC
TATGGCAATCCGGAGAACTGCACCAACGCCTGTAAGCGCATCCTGGAAGT
TATGCAGCAGGAGGCCATCTCTACGAATAAGGGTGAAATTTGCCTCAAAA
TACTCGCCCACAACAATTTGATTGGACGAATCATTGGCAAGTCGGGCAAT
ACCATTAAACGGATCATGCAGGACACCGATACGAAGATCACTGTCAGCTC
TATCAACGACATCAACAGCTTCAATTTGGAGCGAATCATTACGGTCAAGG
GATTAATTGAGAACATGTCGCGTGCTGAGAACCAAATTAGCACCAAGCTG
CGCCAGAGCTACGAGAACGATCTGCAGGCGATGGCGCCGCAGAGCCTCAT
GTTCCCCGGTCTCCATCCGATGGCAATGATGTCGACACCGGGCAACGGCA
TGGTCTTCAATACGAGCATGCCGTTCCCCTCGTGTCAAAGCTTTGCCATG
TCCAAGACTCCGGCTAGTGTGGTGCCACCGGTCTTCCCCAATGACCTACA
GGAAACCACCTATCTCTACATACCCAACAACGCTGTCGGCGCCATTATCG
GCACCAGGGGCTCGCATATCCGAAGCATAATGCGCTTCTCGAACGCATCC
CTTAAAATAGCCCCCCTCGACGCCGACAAGCCGCTGGACCAACAAACGGA
GCGCAAGGTGACGATTGTTGGCACACCGGAGGGTCAGTGGAAGGCGCAGT
ACATGATCTTCGAGAAGATGCGCGAAGAAGGCTTCATGTGTGGCACGGAC
GATGTGCGCCTCACGGTTGAGTTGCTTGTGGCCAGTTCTCAGGTGGGCCG
TATCATTGGCAAGGGTGGCCAAAATGTGCGGGAATTGCAGCGCGTGACGG
GCAGTGTGATCAAATTGCCCGAACATGCCCTTGCACCGCCATCCGGTGGA
GATGAAGAGACACCAGTGCACATCATCGGACTATTCTACAGTGTACAGTC
TGCCCAGCGACGCATCCGAGCCATGATGCTTTCGACAAATCCGCCGCCAA
TAACCAAAAAACAGAAAGCTGCCAAAGAACAATTGCAACAACAGCAACAG
AGCCTAGCCGGAGCCGCGTCCAGCGGTTCCCAGCAGCAACAGCCACAGTC
GCCATCTCAACAACAGGCACTGCCGCCGCAATTGCATCATCAGCCTGTGT
CGTCGGCGTCGTCATCGTCGACGCCGCCTGCACACCATCAGCAGCAGGCG
TCGACGGCAGCGACCTCACACCAGCTGCAGCAGCAGCAGCCATCGCCGCC
GCCACCTGGCAATGCAACTGCGGCCGCAGCTCAGCAGCAGCAGCAGCTGG
CGAGCTCACAACAGTAAAAGCTTTCTAGACCAT
BS10845.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:47:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Imp-RB | 1701 | CG1691-PB | 1..1701 | 17..1717 | 8475 | 99.9 | Plus |
| Imp-RA | 1701 | CG1691-PA | 1..1701 | 17..1717 | 8475 | 99.9 | Plus |
| Imp-RC | 1701 | CG1691-PC | 1..1701 | 17..1717 | 8475 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:47:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Imp-RB | 2863 | CG1691-RB | 307..2007 | 17..1717 | 8475 | 99.9 | Plus |
| Imp-RA | 3300 | CG1691-RA | 528..2228 | 17..1717 | 8475 | 99.9 | Plus |
| Imp-RC | 6762 | CG1691-RC | 501..2201 | 17..1717 | 8475 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:47:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10797834..10798545 | 1194..483 | 3545 | 99.9 | Minus |
| X | 23542271 | X | 10798619..10798994 | 483..108 | 1880 | 100 | Minus |
| X | 23542271 | X | 10797069..10797442 | 1717..1344 | 1870 | 100 | Minus |
| X | 23542271 | X | 10797508..10797666 | 1348..1190 | 780 | 99.4 | Minus |
| X | 23542271 | X | 10805266..10805357 | 108..17 | 460 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 20:47:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6920 | 1478..1680 | 210 | 59.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6911 | 1481..1652 | 209 | 60.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6729..7001 | 1425..1697 | 204 | 58 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2537 | 1428..1661 | 203 | 58.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6923 | 1430..1646 | 188 | 58.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2424 | 1586..1697 | 179 | 66.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..7063 | 1386..1726 | 171 | 56 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2374..2450 | 7..85 | 146 | 68.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2396..2458 | 21..84 | 137 | 70.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2366..2429 | 21..85 | 133 | 69.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2374 | 22..84 | 132 | 69.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2445..2486 | 25..66 | 120 | 76.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2951..2998 | 21..65 | 116 | 75 | Plus |
BS10845.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:13:35 Download gff for
BS10845.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 1..1701 | 17..1717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:44:23 Download gff for
BS10845.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 491..2197 | 9..1717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:11:26 Download gff for
BS10845.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 501..2199 | 17..1715 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:45:57 Download gff for
BS10845.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 497..2195 | 17..1715 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:14 Download gff for
BS10845.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Imp-RC | 501..2199 | 17..1715 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:14 Download gff for
BS10845.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10797071..10797437 | 1349..1715 | 100 | <- | Minus |
| X | 10797508..10797663 | 1193..1348 | 99 | <- | Minus |
| X | 10797836..10798544 | 484..1192 | 99 | <- | Minus |
| X | 10798619..10798993 | 109..483 | 100 | <- | Minus |
| X | 10805266..10805357 | 17..108 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:11:26 Download gff for
BS10845.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10691104..10691470 | 1349..1715 | 100 | <- | Minus |
| arm_X | 10691541..10691696 | 1193..1348 | 99 | <- | Minus |
| arm_X | 10691869..10692577 | 484..1192 | 99 | <- | Minus |
| arm_X | 10692652..10693026 | 109..483 | 100 | <- | Minus |
| arm_X | 10699299..10699390 | 17..108 | 100 | | Minus |
BS10845.pep Sequence
Translation from 16 to 1716
> BS10845.pep
MHSNNNSSRLNNNISNNYYQQKQSLIRYLDRAAVGLNGVEFEGSKLHAEQ
LDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTI
RTITQQSRARVDVHRKENVGSLEKSITIYGNPENCTNACKRILEVMQQEA
ISTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN
SFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLH
PMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYL
YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTI
VGTPEGQWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKG
GQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRI
RAMMLSTNPPPITKKQKAAKEQLQQQQQSLAGAASSGSQQQQPQSPSQQQ
ALPPQLHHQPVSSASSSSTPPAHHQQQASTAATSHQLQQQQPSPPPPGNA
TAAAAQQQQQLASSQQ*
BS10845.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:33:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Imp-PB | 566 | CG1691-PB | 1..566 | 1..566 | 2889 | 100 | Plus |
| Imp-PA | 566 | CG1691-PA | 1..566 | 1..566 | 2889 | 100 | Plus |
| Imp-PC | 566 | CG1691-PC | 1..566 | 1..566 | 2889 | 100 | Plus |
| Imp-PF | 573 | CG1691-PF | 38..573 | 31..566 | 2731 | 100 | Plus |
| Imp-PD | 573 | CG1691-PD | 38..573 | 31..566 | 2731 | 100 | Plus |
