Clone BS10853 Report

Search the DGRC for BS10853

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:108
Well:53
Vector:pDNR-Dual
Associated Gene/TranscriptGlut4EF-RB
Protein status:BS10853.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS10853.3prime Sequence

896 bp (833 high quality bases) assembled on 2006-04-19

> BS10853.3prime
ATGGTCTAGAAAGCTTTCAGTCGCCGAAGCGACTGCACGCCTTCTTCCAC
CGGCACTGGGTGCACCACTGGTCGCGTTTCTCCATGCCGTACACCTTGCG
GCACTTTTTGTTCTCGCCACGCGTCCTCTTGCCGGGCGAATGGGGCGTAT
GCTTGACGGCTACCTGTTGCGCCATGTGCTGTTGCTGCTGCAGCGGATTG
CTTCCGTTGCTGTGGTTGTTACTGTTGTTTTGGGCAACCATGTTGCCGGC
AGTTGTCTGTGGATGCTGCTGCTGGTGGCCGCGCATCGGTTGGTGGTGGT
GCTGCTGCTGCGCCGGATGGAAATTGGGCGTGATCGTCACACTGGACAGG
AGATGTTGCTGCTGCTGTTGGTGGCTGTGTTGCTGCTGCTGCTGGTGGTG
TTGCTGCTGCTGCAGTTGCTGCTGCTGCTGGCTGTGGTGCGCCGTCACTG
TGACGTTCTGCTGCGACAGCTGCTGCAGCATGTTGTTGGCACTGCTATTG
CTGTGGATCACTGGACTGCTGCTGCTGCTGCTGTTGCTGCTGCCGCTGCT
GCCGGCGTAATTGTGGTGGTGCGTGTGTTGGTGGTGCTGCTGTTGCTGGA
CGTACGTCGGCGATGGATATGGCGCTACCGAGTGGGTCGGACGGGAGGAC
GACGAGCGAGCGTGCTTGCCGATCGGCGAGGCTGATGAACTGGCCGCCAC
CGACCCCGTCCCCGTGGAGGAGTAGCTGCCCACTGTCGCCGTCGCCGCCG
GGCATGTGTAGTTGTGGTGGGCTAGGTGCGAAGTGGGGATGCAGCTGGTG
TTGTTGTTCTGCAGCTGCTGCTGGTGGGTGCTCGGGATGTTGCTGCCACT
GATGGTGCGTCCGTGCGACTGCGCTAGATGGTTATAGTGGCTACCG

BS10853.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:57:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG33975-PA 1566 CG33975-RA 687..1566 896..17 4400 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:33:54
Subject Length Description Subject Range Query Range Score Percent Strand
Glut4EF-RH 10796 CG34360-RH 2341..3224 896..13 4420 100 Minus
Glut4EF-RG 4308 CG34360-RG 2341..3224 896..13 4420 100 Minus
Glut4EF-RA 4308 CG34360-RA 2341..3224 896..13 4420 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9986909..9987792 896..13 4420 100 Minus
Blast to na_te.dros performed 2015-02-12 13:33:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2660 576..240 453 64.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6730..6951 438..208 376 66.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2348..2985 858..252 356 56.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2641 525..177 354 62 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2512 464..258 326 66 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2633 483..164 304 60.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2972 843..167 301 56.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2242..2551 495..197 299 60 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6952 405..164 296 61.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6532..6913 549..164 238 56.3 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6532..6891 537..177 232 57.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6449..6864 601..177 229 55.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2506 383..177 219 59.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2346..2488 310..165 216 67.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2346..2494 319..165 175 60 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2425 292..177 173 64.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1604 310..228 127 67 Minus
Fw3 3132 Fw3 FW3 3132bp 1206..1253 207..158 119 74 Minus

BS10853.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:51:41 Download gff for BS10853.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33975-PA 687..1566 17..896 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:16:56 Download gff for BS10853.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33975-PA 687..1566 17..896 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 10:26:58 Download gff for BS10853.3prime
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RA 2341..3230 5..896 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:17:46 Download gff for BS10853.3prime
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RA 2341..3230 5..896 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 17:17:46 Download gff for BS10853.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 9986909..9987798 5..896 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 10:26:58 Download gff for BS10853.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5812631..5813520 5..896 99   Minus

BS10853.5prime Sequence

888 bp (849 high quality bases) assembled on 2006-04-19

> BS10853.5prime
GAAGTTATCAGTCGACATGAGTGGCGAACGCCGCAGAACCACCACACACA
GTATTGAGGTGCCATCGCAGCTGACGGCGCAGCACAATTCCCGGAAACGT
CCGCCCAGCGATCACCAGGACTACGGCAACTATCTGGAAACATGCCGTGC
CGCCGAGATTCTGTCATCGATGAAGTTGCAGAGTCCGCATGGCTCAATGG
CCGACAAGTGCTCGAGTCCCGGCAGCAGCTCTTCGGCTTCCTGGAGCTCC
GGTTCCCCGTCGCCGCCATTGAGTGACGACGGCCACGCCCACCACAGCCC
ACACAATATCATGTCGCCCCACGATGCGGACAACGCACGCACACGCACAG
CATCCGTGTCCACGTCGGACGAGGGCATTGTCATCGACTACAAGGAGGAG
CGCAAGAAAAAGTCCAAAAAGTTCCGATGCGTCTATCGAGGATGTGTTGG
CGTGGTAGACGATCTCAATGGAGTCGTGCGTCACATTAGGAAAACACATT
TGGGAAAGGACTCCCATCGCTCCGCGGATGATGACGGAAATGAGGAGGAC
TTCTACCTCGAGGATGCCGACGACGACGTCGAGCAGGTGAAGCCCACTCT
GGCCTCCGAGCCGACTCTGAGTCACCGGGACATGGCGCGTCCGCCGCACG
AGGATCCCGAGTACCAGAAGCAGATTGTTGGCAACTTCAAGCAAGGACGC
GGCGGTAGCCACTATAACCATCTAGCGCAGTCGCACGGACGCACCATCAG
TGGCAGCAACATCCCGAGCACCCACCAGCAGCAGCTGCAGAACAACAACA
CCAGCTGCATCCCCACTTCGCACCTAGCCCACCACAACTACACATGCCCG
GCGGCGACGGCGACAGTGGGCAGCTACTCCTCCACGGG

BS10853.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:57:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG33975-PA 1566 CG33975-RA 1..872 17..888 4360 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:45:36
Subject Length Description Subject Range Query Range Score Percent Strand
Glut4EF-RH 10796 CG34360-RH 1651..2526 13..888 4380 100 Plus
Glut4EF-RG 4308 CG34360-RG 1651..2526 13..888 4380 100 Plus
Glut4EF-RA 4308 CG34360-RA 1651..2526 13..888 4380 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9943677..9943894 195..412 1090 100 Plus
3R 32079331 3R 9986897..9987094 691..888 990 100 Plus
3R 32079331 3R 9986647..9986834 504..691 940 100 Plus
3R 32079331 3R 9943481..9943587 88..194 535 100 Plus
3R 32079331 3R 9982277..9982370 411..504 470 100 Plus
3R 32079331 3R 9930471..9930545 13..87 375 100 Plus
Blast to na_te.dros performed on 2015-02-12 19:45:34 has no hits.

BS10853.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:51:43 Download gff for BS10853.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33975-PA 1..872 17..888 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:16:58 Download gff for BS10853.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33975-PA 1..872 17..888 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:50:11 Download gff for BS10853.5prime
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RA 1647..2526 8..888 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:53:47 Download gff for BS10853.5prime
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RA 1647..2526 8..888 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:53:47 Download gff for BS10853.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 9986648..9986833 505..690 100 -> Plus
3R 9986897..9987094 691..888 100   Plus
3R 9930467..9930545 8..87 97 -> Plus
3R 9943481..9943587 88..194 100 -> Plus
3R 9943677..9943894 195..412 100 -> Plus
3R 9982279..9982370 413..504 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:50:11 Download gff for BS10853.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5756189..5756267 8..87 97 -> Plus
arm_3R 5769203..5769309 88..194 100 -> Plus
arm_3R 5769399..5769616 195..412 100 -> Plus
arm_3R 5808001..5808092 413..504 100 -> Plus
arm_3R 5812370..5812555 505..690 100 -> Plus
arm_3R 5812619..5812816 691..888 100   Plus

BS10853.complete Sequence

1598 bp assembled on 2006-11-01

GenBank Submission: FJ636739

> BS10853.complete
GAAGTTATCAGTCGACATGAGTGGCGAACGCCGCAGAACCACCACACACA
GTATTGAGGTGCCATCGCAGCTGACGGCGCAGCACAATTCCCGGAAACGT
CCGCCCAGCGATCACCAGGACTACGGCAACTATCTGGAAACATGCCGTGC
CGCCGAGATTCTGTCATCGATGAAGTTGCAGAGTCCGCATGGCTCAATGG
CCGACAAGTGCTCGAGTCCCGGCAGCAGCTCTTCGGCTTCCTGGAGCTCC
GGTTCCCCGTCGCCGCCATTGAGTGACGACGGCCACGCCCACCACAGCCC
ACACAATATCATGTCGCCCCACGATGCGGACAACGCACGCACACGCACAG
CATCCGTGTCCACGTCGGACGAGGGCATTGTCATCGACTACAAGGAGGAG
CGCAAGAAAAAGTCCAAAAAGTTCCGATGCGTCTATCGAGGATGTGTTGG
CGTGGTAGACGATCTCAATGGAGTCGTGCGTCACATTAGGAAAACACATT
TGGGAAAGGACTCCCATCGCTCCGCGGATGATGACGGAAATGAGGAGGAC
TTCTACCTCGAGGATGCCGACGACGACGTCGAGCAGGTGAAGCCCACTCT
GGCCTCCGAGCCGACTCTGAGTCACCGGGACATGGCGCGTCCGCCGCACG
AGGATCCCGAGTACCAGAAGCAGATTGTTGGCAACTTCAAGCAAGGACGC
GGCGGTAGCCACTATAACCATCTAGCGCAGTCGCACGGACGCACCATCAG
TGGCAGCAACATCCCGAGCACCCACCAGCAGCAGCTGCAGAACAACAACA
CCAGCTGCATCCCCACTTCGCACCTAGCCCACCACAACTACACATGCCCG
GCGGCGACGGCGACAGTGGGCAGCTACTCCTCCACGGGGACGGGGTCGGT
GGCGGCCAGTTCATCAGCCTCGCCGATCGGCAAGCACGCTCGCTCGTCGT
CCTCCCGTCCGACCCACTCGGTAGCGCCATATCCATCGCCGACGTACGTC
CAGCAACAGCAGCACCACCAACACACGCACCACCACAATTACGCCGGCAG
CAGCGGCAGCAGCAACAGCAGCAGCAGCAGCAGTCCAGTGATCCACAGCA
ATAGCAGTGCCAACAACATGCTGCAGCAGCTGTCGCAGCAGAACGTCACA
GTGACGGCGCACCACAGCCAGCAGCAGCAGCAACTGCAGCAGCAGCAACA
CCACCAGCAGCAGCAGCAACACAGCCACCAACAGCAGCAGCAACATCTCC
TGTCCAGTGTGACGATCACGCCCAATTTCCATCCGGCGCAGCAGCAGCAC
CACCACCAACCGATGCGCGGCCACCAGCAGCAGCATCCACAGACAACTGC
CGGCAACATGGTTGCCCAAAACAACAGTAACAACCACAGCAACGGAAGCA
ATCCGCTGCAGCAGCAACAGCACATGGCGCAACAGGTAGCCGTCAAGCAT
ACGCCCCATTCGCCCGGCAAGAGGACGCGTGGCGAGAACAAAAAGTGCCG
CAAGGTGTACGGCATGGAGAAACGCGACCAGTGGTGCACCCAGTGCCGGT
GGAAGAAGGCGTGCAGTCGCTTCGGCGACTGAAAGCTTTCTAGACCAT

BS10853.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:11:00
Subject Length Description Subject Range Query Range Score Percent Strand
Glut4EF-RG 2853 CG34360-PG 657..2230 13..1586 7870 100 Plus
Glut4EF-RH 2226 CG34360-PH 657..2226 13..1582 7850 100 Plus
Glut4EF-RA 2226 CG34360-PA 657..2226 13..1582 7850 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:11:02
Subject Length Description Subject Range Query Range Score Percent Strand
Glut4EF-RH 10796 CG34360-RH 1651..3224 13..1586 7870 100 Plus
Glut4EF-RG 4308 CG34360-RG 1651..3224 13..1586 7870 100 Plus
Glut4EF-RA 4308 CG34360-RA 1651..3224 13..1586 7870 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:10:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9986897..9987792 691..1586 4480 100 Plus
3R 32079331 3R 9943677..9943894 195..412 1090 100 Plus
3R 32079331 3R 9986647..9986834 504..691 940 100 Plus
3R 32079331 3R 9943481..9943587 88..194 535 100 Plus
3R 32079331 3R 9982277..9982370 411..504 470 100 Plus
3R 32079331 3R 9930471..9930545 13..87 375 100 Plus
Blast to na_te.dros performed 2014-11-28 05:10:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2660 1023..1359 453 64.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2276..2985 651..1347 376 57.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6730..6951 1161..1391 376 66.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2641 1074..1422 354 62 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2512 1135..1341 326 66 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2633 1116..1435 304 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2972 756..1432 301 56.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2242..2551 1104..1402 299 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6952 1194..1435 296 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6532..6913 1050..1435 238 56.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6532..6891 1062..1422 232 57.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6449..6864 998..1422 229 55.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2506 1216..1422 219 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2346..2488 1289..1434 216 67.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2346..2494 1280..1434 175 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2425 1307..1422 173 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1604 1289..1371 127 67 Plus
Fw3 3132 Fw3 FW3 3132bp 1206..1253 1392..1441 119 74 Plus

BS10853.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:52:54 Download gff for BS10853.complete
Subject Subject Range Query Range Percent Splice Strand
CG34360-RA 653..2226 8..1582 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:41:27 Download gff for BS10853.complete
Subject Subject Range Query Range Percent Splice Strand
CG34360-RB 922..2486 17..1581 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:26 Download gff for BS10853.complete
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RA 1655..3219 17..1581 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:52:54 Download gff for BS10853.complete
Subject Subject Range Query Range Percent Splice Strand
CG34360-RB 914..2497 8..1594 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:05:37 Download gff for BS10853.complete
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RA 1655..3219 17..1581 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:05:37 Download gff for BS10853.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9930475..9930545 17..87 100 -> Plus
3R 9943481..9943587 88..194 100 -> Plus
3R 9943677..9943894 195..412 100 -> Plus
3R 9982279..9982370 413..504 100 -> Plus
3R 9986648..9986833 505..690 100 -> Plus
3R 9986897..9987787 691..1581 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:26 Download gff for BS10853.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5756197..5756267 17..87 100 -> Plus
arm_3R 5769203..5769309 88..194 100 -> Plus
arm_3R 5769399..5769616 195..412 100 -> Plus
arm_3R 5808001..5808092 413..504 100 -> Plus
arm_3R 5812370..5812555 505..690 100 -> Plus
arm_3R 5812619..5813509 691..1581 100   Plus

BS10853.pep Sequence

Translation from 16 to 1581

> BS10853.pep
MSGERRRTTTHSIEVPSQLTAQHNSRKRPPSDHQDYGNYLETCRAAEILS
SMKLQSPHGSMADKCSSPGSSSSASWSSGSPSPPLSDDGHAHHSPHNIMS
PHDADNARTRTASVSTSDEGIVIDYKEERKKKSKKFRCVYRGCVGVVDDL
NGVVRHIRKTHLGKDSHRSADDDGNEEDFYLEDADDDVEQVKPTLASEPT
LSHRDMARPPHEDPEYQKQIVGNFKQGRGGSHYNHLAQSHGRTISGSNIP
STHQQQLQNNNTSCIPTSHLAHHNYTCPAATATVGSYSSTGTGSVAASSS
ASPIGKHARSSSSRPTHSVAPYPSPTYVQQQQHHQHTHHHNYAGSSGSSN
SSSSSSPVIHSNSSANNMLQQLSQQNVTVTAHHSQQQQQLQQQQHHQQQQ
QHSHQQQQQHLLSSVTITPNFHPAQQQHHHQPMRGHQQQHPQTTAGNMVA
QNNSNNHSNGSNPLQQQQHMAQQVAVKHTPHSPGKRTRGENKKCRKVYGM
EKRDQWCTQCRWKKACSRFGD*

BS10853.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:50:34
Subject Length Description Subject Range Query Range Score Percent Strand
Glut4EF-PH 741 CG34360-PH 221..741 1..521 2817 100 Plus
Glut4EF-PG 950 CG34360-PG 221..741 1..521 2817 100 Plus
Glut4EF-PA 741 CG34360-PA 221..741 1..521 2817 100 Plus
Glut4EF-PF 521 CG34360-PF 1..521 1..521 2817 100 Plus
Glut4EF-PB 521 CG34360-PB 1..521 1..521 2817 100 Plus