Clone BS10859 Report

Search the DGRC for BS10859

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:108
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG14764-RA
Protein status:BS10859.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS10859.3prime Sequence

796 bp (775 high quality bases) assembled on 2006-04-19

> BS10859.3prime
ATGGTCTAGAAAGCTTTCAGTCGTCCGTGAAAGGATGGTCGGAGGTTTCG
CTGCTGTTGCGCCGCCTGCTCTCCAGTATACGGGTCGCCTGCTCCAGGCT
TTCCTTGTAGAATATGTTACGCGGACTGTCGCCGGGCAGCGAGTATTCAG
AGGTGTCCATTTGGAAAGTTAGGCCCAGCACGATGTTGAAGGCGGACGCA
TCGTAGCCGTGGCAGCCAGAGTATCGGAACATCGGCTTCTTGTTGAACTT
GCAGCCATTCGATTGGGCACCGATCGGATCGATGCACTCGAGGGTGAGGC
AGCACTTCAGCCAGGGAAGCATGATCTTCTCGGCCACCAAGGAGCTGTCC
GAGAAGAAGACAGCATCCAGGTCGACCATCCGAAGAAAGTTAAACTCCTC
AGCTTTCGACTCAAAGTAGTCGAACATTTTTGGATGCGTCAGAGAGGATA
CCGCCGTCGCTGTGTTCCATCCGAGCACTCCAGCGGACTTGACTGCAGAT
TTTCCCACTCCTGGATTCATAACGATGCTCTGCAGACTTCGCAGCTGGGC
GGAACCTCCGCGCACGCGCATGCTGTTTTCCAAGAAGAGAACCGATCGGG
CACGCATAAGACCGTCCTTAATTACAATGGGCCGGTAGGCGTGCGTCCGC
TGATCGGCGACGAAGGAGGGAAACTCCGACAGATCATAGGTGATCACCGA
GCATCGGCTGTTATTACAGTAGGCGCCCAAATCCCGTAGTTGCTCCTCGG
AAACGCCCAAATCGTAGATTAGCAGGTACTCGCTGGGAAGCTTGGC

BS10859.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:57:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-PA 1314 CG14764-RA 535..1314 796..17 3900 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:02:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-RC 2272 CG14764-RC 901..1680 796..17 3900 100 Minus
CG14764-RA 2742 CG14764-RA 1371..2150 796..17 3900 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:02:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7947602..7948130 268..796 2645 100 Plus
2R 25286936 2R 7942635..7942889 17..271 1275 100 Plus
Blast to na_te.dros performed on 2015-02-10 22:02:28 has no hits.

BS10859.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:51:55 Download gff for BS10859.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-PA 535..1314 17..796 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:17:15 Download gff for BS10859.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-PA 535..1314 17..796 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:54:31 Download gff for BS10859.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 1371..2153 12..796 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:58:04 Download gff for BS10859.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 1371..2153 12..796 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:58:04 Download gff for BS10859.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7942632..7942888 12..270 99 <- Plus
2R 7947605..7948130 271..796 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:54:31 Download gff for BS10859.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3830137..3830393 12..270 99 <- Plus
arm_2R 3835110..3835635 271..796 100   Plus

BS10859.5prime Sequence

978 bp (841 high quality bases) assembled on 2006-04-19

> BS10859.5prime
GAAGTTATCAGTCGACATGCGCACGAAACACCTGATCCTGATACTGATCG
GAGTGATAATCGCCACGATCGTCTTCATCGCATTTGGTCCAGCCGGAGAG
CCGAACGATTCATTCAAGAACATCGTTGTCCAGACGCACCAGCAGTTTAA
AGAGTTCCAGGAAAACCTCCGCGTTGGCTTGGAACGCAAAAAGCTCGAAA
TAGACCCAAAGTATTTGCTTCTTCTGGGCTTCACCTCGTCAAATGAAGCT
ACAGGCCAACAGCAGCAGCTGGATCAGCAAAATGTGGTGGACATCGGTTC
ACCAGGTCAGCAACTGCCAAAGACAGATTTTTCAGCGCCGGCTACAAAAG
CGGAACTGGAGCTCAGCGAACTGCGAGGTCTGCGGCGTCCACAGGATGCT
GTTACCTTCGGTAGTCAGGCAGGAGATCAAAAGGGGCAGCGGAAGCGGAT
CACGACGCCGTACAACGGTACAAAGAGCAACTTCACAATCGTCAGCTATG
TGCTGGAGGGGCAGGCCGCATCGGCCATCCTGCTGGCCCAGAATATTGCC
GCCAAGCTTCCCAGCGAGTACCTGCTAATCTACGATTTGGGCGTTTCCGA
GGAGCAACTACGGGATTTGGGCGCCTACTGTAATAACAGCCGATGCTCGG
TGATCACCTATGATCTGTCGGAGTTTCCCTCCTTCGTCGCCGATCAGCGG
ACGCACGCCTACCGGCCCATTGTAATTAAGGACGGTCTTATGCGTGCCCG
ATCGGTTCTCTTCTTGGAAAACAGCATGCGCGTGCGCGGAGGTTCCGCCC
AGCTGCGAAGTCTGCAGAGCATCGTTATGAATCCAGGAGTGGGGAAATCT
GCAGTCAAGTCCGCTGGAGTGCTCGGATGGGACACAGCGACGGCGGTATC
CTCTCTGACGCATCCAAAAATGTTCGACTACTTTGAGTCGAAAGCTGAGG
AGTTTAACTTTCTTCGGATGGTCGACCT

BS10859.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:57:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-PA 1314 CG14764-RA 1..962 17..978 4760 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:25:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-RC 2272 CG14764-RC 366..1328 16..978 4785 99.8 Plus
CG14764-RA 2742 CG14764-RA 836..1798 16..978 4785 99.8 Plus
CG14764-RB 1293 CG14764-RB 836..980 16..160 725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:25:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7947703..7948523 978..158 4075 99.8 Minus
2R 25286936 2R 7953901..7954046 161..16 730 100 Minus
Blast to na_te.dros performed on 2015-02-12 16:25:03 has no hits.

BS10859.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:51:56 Download gff for BS10859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-PA 1..962 17..978 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:17:17 Download gff for BS10859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-PA 1..962 17..978 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 17:17:48 Download gff for BS10859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 830..1798 10..978 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:26:20 Download gff for BS10859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 830..1798 10..978 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:26:20 Download gff for BS10859.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7953902..7954052 10..160 98   Minus
2R 7947703..7948520 161..978 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 17:17:48 Download gff for BS10859.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3835208..3836025 161..978 99 <- Minus
arm_2R 3841407..3841557 10..160 98   Minus

BS10859.complete Sequence

1346 bp assembled on 2006-11-01

GenBank Submission: FJ636740

> BS10859.complete
GAAGTTATCAGTCGACATGCGCACGAAACACCTGATCCTGATACTGATCG
GAGTGATAATCGCCACGATCGTCTTCATCGCATTTGGTCCAGCCGGAGAG
CCGAACGATTCATTCAAGAACATCGTTGTCCAGACGCACCAGCAGTTTAA
AGAGTTCCAGGAAAACCTCCGCGTTGGCTTGGAACGCAAAAAGCTCGAAA
TAGACCCAAAGTATTTGCTTCTTCTGGGCTTCACCTCGTCAAATGAAGCT
ACAGGCCAACAGCAGCAGCTGGATCAGCAAAATGTGGTGGACATCGGTTC
ACCAGGTCAGCAACTGCCAAAGACAGATTTTTCAGCGCCGGCTACAAAAG
CGGAACTGGAGCTCAGCGAACTGCGAGGTCTGCGGCGTCCACAGGATGCT
GTTACCTTCGGTAGTCAGGCAGGAGATCAAAAGGGGCAGCGGAAGCGGAT
CACGACGCCGTACAACGGTACAAAGAGCAACTTCACAATCGTCAGCTATG
TGCTGGAGGGGCAGGCCGCATCGGCCATCCTGCTGGCCCAGAATATTGCC
GCCAAGCTTCCCAGCGAGTACCTGCTAATCTACGATTTGGGCGTTTCCGA
GGAGCAACTACGGGATTTGGGCGCCTACTGTAATAACAGCCGATGCTCGG
TGATCACCTATGATCTGTCGGAGTTTCCCTCCTTCGTCGCCGATCAGCGG
ACGCACGCCTACCGGCCCATTGTAATTAAGGACGGTCTTATGCGTGCCCG
ATCGGTTCTCTTCTTGGAAAACAGCATGCGCGTGCGCGGAGGTTCCGCCC
AGCTGCGAAGTCTGCAGAGCATCGTTATGAATCCAGGAGTGGGAAAATCT
GCAGTCAAGTCCGCTGGAGTGCTCGGATGGAACACAGCGACGGCGGTATC
CTCTCTGACGCATCCAAAAATGTTCGACTACTTTGAGTCGAAAGCTGAGG
AGTTTAACTTTCTTCGGATGGTCGACCTGGATGCTGTCTTCTTCTCGGAC
AGCTCCTTGGTGGCCGAGAAGATCATGCTTCCCTGGCTGAAGTGCTGCCT
CACCCTCGAGTGCATCGATCCGATCGGTGCCCAATCGAATGGCTGCAAGT
TCAACAAGAAGCCGATGTTCCGATACTCTGGCTGCCACGGCTACGATGCG
TCCGCCTTCAACATCGTGCTGGGCCTAACTTTCCAAATGGACACCTCTGA
ATACTCGCTGCCCGGCGACAGTCCGCGTAACATATTCTACAAGGAAAGCC
TGGAGCAGGCGACCCGTATACTGGAGAGCAGGCGGCGCAACAGCAGCGAA
ACCTCCGACCATCCTTTCACGGACGACTGAAAGCTTTCTAGACCAT

BS10859.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:11:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-RC 1314 CG14764-PC 1..1314 17..1330 6570 100 Plus
CG14764-RA 1314 CG14764-PA 1..1314 17..1330 6570 100 Plus
CG14764-RB 303 CG14764-PB 1..144 17..160 720 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:11:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-RC 2272 CG14764-RC 366..1680 16..1330 6575 100 Plus
CG14764-RA 2742 CG14764-RA 836..2150 16..1330 6575 100 Plus
CG14764-RB 1293 CG14764-RB 836..980 16..160 725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:11:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7947602..7948523 1079..158 4610 100 Minus
2R 25286936 2R 7942635..7942889 1330..1076 1275 100 Minus
2R 25286936 2R 7953901..7954046 161..16 730 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:11:21 has no hits.

BS10859.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:52:55 Download gff for BS10859.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 1..1314 17..1330 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:41:30 Download gff for BS10859.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 827..2139 17..1329 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:28 Download gff for BS10859.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 837..2149 17..1329 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:52:56 Download gff for BS10859.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 820..2143 10..1335 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:05:46 Download gff for BS10859.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RA 837..2149 17..1329 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:05:46 Download gff for BS10859.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7942636..7942888 1077..1329 100 <- Minus
2R 7947605..7948520 161..1076 100 <- Minus
2R 7953902..7954045 17..160 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:28 Download gff for BS10859.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3830141..3830393 1077..1329 100 <- Minus
arm_2R 3835110..3836025 161..1076 100 <- Minus
arm_2R 3841407..3841550 17..160 100   Minus

BS10859.pep Sequence

Translation from 16 to 1329

> BS10859.pep
MRTKHLILILIGVIIATIVFIAFGPAGEPNDSFKNIVVQTHQQFKEFQEN
LRVGLERKKLEIDPKYLLLLGFTSSNEATGQQQQLDQQNVVDIGSPGQQL
PKTDFSAPATKAELELSELRGLRRPQDAVTFGSQAGDQKGQRKRITTPYN
GTKSNFTIVSYVLEGQAASAILLAQNIAAKLPSEYLLIYDLGVSEEQLRD
LGAYCNNSRCSVITYDLSEFPSFVADQRTHAYRPIVIKDGLMRARSVLFL
ENSMRVRGGSAQLRSLQSIVMNPGVGKSAVKSAGVLGWNTATAVSSLTHP
KMFDYFESKAEEFNFLRMVDLDAVFFSDSSLVAEKIMLPWLKCCLTLECI
DPIGAQSNGCKFNKKPMFRYSGCHGYDASAFNIVLGLTFQMDTSEYSLPG
DSPRNIFYKESLEQATRILESRRRNSSETSDHPFTDD*

BS10859.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:50:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-PC 437 CG14764-PC 1..437 1..437 2236 100 Plus
CG14764-PA 437 CG14764-PA 1..437 1..437 2236 100 Plus
CG14764-PB 100 CG14764-PB 1..52 1..52 246 94.2 Plus