Clone BS10867 Report

Search the DGRC for BS10867

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:108
Well:67
Vector:pDNR-Dual
Associated Gene/Transcriptobsolete transcript model
Protein status:BS10867.pep: validated full length
Sequenced Size:16

Clone Sequence Records

BS10867.3prime Sequence

903 bp (785 high quality bases) assembled on 2006-04-19

> BS10867.3prime
ATGGTCTAGAAAGCTTTCATCTCTGTCTGTCTGGAAGTGATTCGAACTGC
GCTGTCTCGTCCTGTCCATTCCCTTGGTCATCGGTGGCTTTCTCAGGATT
ATAGTCGTAAAACACCTGCGAAGTATCGCCCTGGACATTCACATCGATTG
GCGCACCCACATCATCAATCGGTGCTGAGCTGAAATCGCCTCGTGGCGGG
TCCTTCGGACTGTCCACCATGATCTGAACTGTGGGCATCGCGCACGTGTC
CATTGAGCTCTCTACCGAGCCCGTTGTGATGCGTATCTGAGGCGGCGGCT
GCTTGCTAAGCATGTCCAGGCCGACACCAAAACCATTTCCGTTGCCGCTC
ACGGACGGGCTGCTCTCATCCTCCTCCTTATACTCTTCGCTCTCGCGGTG
TACCAGTACGTGGACCAGAGTTGCGTTGTCCGGACGCAGGCTCAGCGAGT
GCGGATGCGTCTGTTGCTCTGGCGACGGCCTGGTGACGATCACCTCGGGG
GCTGACGCCTCAGAGACAAAAGCGTTCTTGTTTACTCTTAAAGCGCTTTG
TGCTGACAAACCTCTTTCTAGGGGCGGTTTCTTGCGAATGAAACTAGAGG
CGCGCTTACGTGATGGAGCCGACCCACCCCCCACCGCCTGGTGTCGGTCG
CTGTCGGAGGCGGAGGTGGCTGCTGGGCCACACCCAGTGGCTGGGGCGGT
GGCGGTGGAGGAGGCCGTGCCGGAGGTGGAGGCGGAGTTTGAGGTGGTGT
TGGTCGTGTTGTTCATTGCGGTTTTTCTATGTACTGAAGGTGAGGTTAAG
CTGTCATCGACAGCATCCTGATGACGCAAAAAGAAATTATAAAAGCTTCG
GCGACGACTTGCTCTAGGCGCTTCCACAAAATGCTACCGCGTTTGCCAGC
TCG

BS10867.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:57:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG18506-PA 942 CG18506-RA 78..942 881..17 4325 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 03:14:57
Subject Length Description Subject Range Query Range Score Percent Strand
NaCP60E-RP 11475 CG34405-RP 8466..9354 903..17 4395 99.8 Minus
NaCP60E-RO 12475 CG34405-RO 9466..10354 903..17 4395 99.8 Minus
NaCP60E-RN 12573 CG34405-RN 9564..10452 903..17 4395 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 03:14:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24917648..24918144 513..17 2485 100 Minus
2R 25286936 2R 24917320..24917577 771..514 1290 100 Minus
2R 25286936 2R 24916781..24916890 881..772 550 100 Minus
Blast to na_te.dros performed on 2015-02-09 03:14:53 has no hits.

BS10867.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:52:12 Download gff for BS10867.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18506-PA 54..942 17..903 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:17:41 Download gff for BS10867.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18506-PA 54..942 17..903 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 07:53:55 Download gff for BS10867.3prime
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9564..10455 12..903 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 05:25:56 Download gff for BS10867.3prime
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9564..10455 12..903 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 05:25:56 Download gff for BS10867.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 24916771..24916890 772..890 99 -> Minus
2R 24917320..24917577 514..771 100 -> Minus
2R 24917648..24918147 12..513 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 07:53:55 Download gff for BS10867.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20804294..20804413 772..890 99 -> Minus
arm_2R 20804843..20805100 514..771 100 -> Minus
arm_2R 20805171..20805670 12..513 99   Minus

BS10867.5prime Sequence

856 bp (768 high quality bases) assembled on 2006-04-19

> BS10867.5prime
GAAGTTATCAGTCGACATGCTCGTCTCAGGTGCCGACGAAGTAGTCAAGG
ATATAAAACAGCAAAACGACGAGCTGGGCAAACGCGGTAGCATTTTTGTG
GAAGCGCCTAGAGCAAGTCGTCGCCGAAGCTTTTATAATTTCTTTTTGCG
TCATCAGGATGCTGTCGATGACAGCTTAACCTCACCTTCAGTACATAGAA
AAACCGCAATGAACAACACGACCAACACCACCTCAAACTCCGCCTCCACC
TCCGGCACGGCCTCCTCCACCGCCACCGCCCCAGCCACTGGGTGTGGCCC
AGCAGCCACCTCCGCCTCCGACAGCGACCGACACCAGGCGGTGGGGGGTG
GGTCGGCTCCATCACGTAAGCGCGCCTCTAGTTTCATTCGCAAGAAACCG
CCCCTAGAAAGAGGTTTGTCAGCACAAAGCGCTTTAAGAGTAAACAAGAA
CGCTTTTGTCTCTGAGGCGTCAGCCCCCGAGGTGATCGTCACCAGGCCGT
CGCCAGAGCAACAGACGCATCCGCACTCGCTGAGCCTGCGTCCGGACAAC
GCAACTCTGGTCCACGTACTGGTACACCGCGAGAGCGAAGAGTATAAGGA
GGAGGATGAGAGCAGCCCGTCCGTGAGCGGCAACGGAAATGGTTTTGGTG
TCGGCCTGGACATGCTTAGCAAGCAGCCGCCGCCTCAGATACGCATCACA
ACGGGCTCGGTAGAGAGCTCAATGGACACGTGCGCGATGCCCACAGTTCA
GATCATGGTGGACAGTCCGAAGGACCCGCCACGAGGCGATTTCAGCTCAG
CACCGATTGATGATGTGGGTGCGCCAATCGATGTGAATGTCCAGGGCGAT
ACTTCG

BS10867.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:57:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG18506-PA 942 CG18506-RA 1..840 17..856 4200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:11:23
Subject Length Description Subject Range Query Range Score Percent Strand
NaCP60E-RP 11475 CG34405-RP 8413..9252 17..856 4200 100 Plus
NaCP60E-RO 12475 CG34405-RO 9413..10252 17..856 4200 100 Plus
NaCP60E-RN 12573 CG34405-RN 9511..10350 17..856 4200 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:11:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24917648..24918042 462..856 1975 100 Plus
2R 25286936 2R 24917320..24917577 204..461 1290 100 Plus
2R 25286936 2R 24916771..24916890 84..203 600 100 Plus
2R 25286936 2R 24915395..24915462 17..84 340 100 Plus
Blast to na_te.dros performed on 2015-02-10 22:11:19 has no hits.

BS10867.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:52:13 Download gff for BS10867.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18506-PA 1..840 17..856 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:17:42 Download gff for BS10867.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18506-PA 1..840 17..856 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 03:55:16 Download gff for BS10867.5prime
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9511..10350 17..856 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:06:48 Download gff for BS10867.5prime
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9511..10350 17..856 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:06:48 Download gff for BS10867.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 24915395..24915462 17..84 100 -> Plus
2R 24916772..24916890 85..203 100 -> Plus
2R 24917320..24917577 204..461 100 -> Plus
2R 24917648..24918042 462..856 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:55:16 Download gff for BS10867.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20802918..20802985 17..84 100 -> Plus
arm_2R 20804295..20804413 85..203 100 -> Plus
arm_2R 20804843..20805100 204..461 100 -> Plus
arm_2R 20805171..20805565 462..856 100   Plus

BS10867.complete Sequence

974 bp assembled on 2006-11-01

> BS10867.complete
GAAGTTATCAGTCGACATGCTCGTCTCAGGTGCCGACGAAGTAGTCAAGG
ATATAAAACAGCAAAACGACGAGCTGGGCAAACGCGGTAGCATTTTTGTG
GAAGCGCCTAGAGCAAGTCGTCGCCGAAGCTTTTATAATTTCTTTTTGCG
TCATCAGGATGCTGTCGATGACAGCTTAACCTCACCTTCAGTACATAGAA
AAACCGCAATGAACAACACGACCAACACCACCTCAAACTCCGCCTCCACC
TCCGGCACGGCCTCCTCCACCGCCACCGCCCCAGCCACTGGGTGTGGCCC
AGCAGCCACCTCCGCCTCCGACAGCGACCGACACCAGGCGGTGGGGGGTG
GGTCGGCTCCATCACGTAAGCGCGCCTCTAGTTTCATTCGCAAGAAACCG
CCCCTAGAAAGAGGTTTGTCAGCACAAAGCGCTTTAAGAGTAAACAAGAA
CGCTTTTGTCTCTGAGGCGTCAGCCCCCGAGGTGATCGTCACCAGGCCGT
CGCCAGAGCAACAGACGCATCCGCACTCGCTGAGCCTGCGTCCGGACAAC
GCAACTCTGGTCCACGTACTGGTACACCGCGAGAGCGAAGAGTATAAGGA
GGAGGATGAGAGCAGCCCGTCCGTGAGCGGCAACGGAAATGGTTTTGGTG
TCGGCCTGGACATGCTTAGCAAGCAGCCGCCGCCTCAGATACGCATCACA
ACGGGCTCGGTAGAGAGCTCAATGGACACGTGCGCGATGCCCACAGTTCA
GATCATGGTGGACAGTCCGAAGGACCCGCCACGAGGCGATTTCAGCTCAG
CACCGATTGATGATGTGGGTGCGCCAATCGATGTGAATGTCCAGGGCGAT
ACTTCGCAGGTGTTTTACGACTATAATCCTGAGAAAGCCACCGATGACCA
AGGGAATGGACAGGACGAGACAGCGCAGTTCGAATCACTTCCAGACAGAC
AGAGATGAAAGCTTTCTAGACCAT

BS10867.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:07:29
Subject Length Description Subject Range Query Range Score Percent Strand
NaCP60E-RI 8139 CG34405-PI 7198..8139 17..958 4710 100 Plus
NaCP60E-RH 8535 CG34405-PH 7594..8535 17..958 4710 100 Plus
NaCP60E-RG 8535 CG34405-PG 7594..8535 17..958 4710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:07:30
Subject Length Description Subject Range Query Range Score Percent Strand
NaCP60E-RP 11475 CG34405-RP 8413..9354 17..958 4710 100 Plus
NaCP60E-RO 12475 CG34405-RO 9413..10354 17..958 4710 100 Plus
NaCP60E-RN 12573 CG34405-RN 9511..10452 17..958 4710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:07:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24917648..24918144 462..958 2485 100 Plus
2R 25286936 2R 24917320..24917577 204..461 1290 100 Plus
2R 25286936 2R 24916771..24916890 84..203 600 100 Plus
2R 25286936 2R 24915395..24915462 17..84 340 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:07:28 has no hits.

BS10867.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:52:58 Download gff for BS10867.complete
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RC 7525..8466 17..958 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:28:28 Download gff for BS10867.complete
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RC 7925..8869 17..963 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:39:38 Download gff for BS10867.complete
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9511..10451 17..957 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:52:58 Download gff for BS10867.complete
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RC 7925..8869 17..963 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:45:07 Download gff for BS10867.complete
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9511..10451 17..957 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:45:07 Download gff for BS10867.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24917320..24917577 204..461 100 -> Plus
2R 24916772..24916890 85..203 100 -> Plus
2R 24915395..24915462 17..84 100 -> Plus
2R 24917648..24918143 462..957 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:39:38 Download gff for BS10867.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20802918..20802985 17..84 100 -> Plus
arm_2R 20804295..20804413 85..203 100 -> Plus
arm_2R 20804843..20805100 204..461 100 -> Plus
arm_2R 20805171..20805666 462..957 100   Plus

BS10867.pep Sequence

Translation from 16 to 957

> BS10867.pep
MLVSGADEVVKDIKQQNDELGKRGSIFVEAPRASRRRSFYNFFLRHQDAV
DDSLTSPSVHRKTAMNNTTNTTSNSASTSGTASSTATAPATGCGPAATSA
SDSDRHQAVGGGSAPSRKRASSFIRKKPPLERGLSAQSALRVNKNAFVSE
ASAPEVIVTRPSPEQQTHPHSLSLRPDNATLVHVLVHRESEEYKEEDESS
PSVSGNGNGFGVGLDMLSKQPPPQIRITTGSVESSMDTCAMPTVQIMVDS
PKDPPRGDFSSAPIDDVGAPIDVNVQGDTSQVFYDYNPEKATDDQGNGQD
ETAQFESLPDRQR*

BS10867.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:50:17
Subject Length Description Subject Range Query Range Score Percent Strand
NaCP60E-PI 2712 CG34405-PI 2400..2712 1..313 1605 100 Plus
NaCP60E-PH 2844 CG34405-PH 2532..2844 1..313 1605 100 Plus
NaCP60E-PG 2844 CG34405-PG 2532..2844 1..313 1605 100 Plus
NaCP60E-PM 2896 CG34405-PM 2532..2844 1..313 1605 100 Plus
NaCP60E-PK 2833 CG34405-PK 2537..2833 1..313 1500 94.6 Plus