Clone Sequence Records
BS10882.3prime Sequence
453 bp (452 high quality bases) assembled on 2006-04-19
> BS10882.3prime
ATGGTCTAGAAAGCTTTTAAATCGTTTCATGTATTAGAATCATCGGCATA
AGTATTGGGGTTGCTTTCCGGTATTCTAGAAGTGTAAATAAATGTATATT
CAATGAAGATTTTCCATATAAGGGATAATCAGGGATGCGTATTTTTGGAG
GCGTGATTACGCTGATCACGCCACCTAAGTATATCAGCTTTGAACTATCA
ATAAATGGAGTGACACGCATGTATATGGAATGCGATGGCTGACCAATTGC
CGAAAAATTAAACCGAGGATCCCTCGCCGCCGTCAGAAATTCCCGCGCTG
CAGTCCTAAACTCCCACGCTGCCGTCAAAAAAGGTCCCACGCCGCCGTCC
AATCTTATAAGAATCCCGCGCCGCTGTCCAGAACCTCGATCCCTCGCTGC
AGTCCCGATCTCCGTCTCCCACGCCGCAGTCATCTCCATGTCGACTGATA
ACT
BS10882.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 18:58:05 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 18:45:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:45:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 230515..230937 | 439..17 | 2100 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-12 18:45:36 has no hits.
BS10882.3prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:20:30 Download gff for
BS10882.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230505..230937 | 17..453 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:20:30 Download gff for
BS10882.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230505..230937 | 17..453 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:21:59 Download gff for
BS10882.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230505..230937 | 17..453 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:21:59 Download gff for
BS10882.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230505..230937 | 17..453 | 98 | | Minus |
BS10882.5prime Sequence
453 bp (452 high quality bases) assembled on 2006-04-19
> BS10882.5prime
GAAGTTATCAGTCGACATGGAGATGACTGCGGCGTGGGAGACGGAGATCG
GGACTGCAGCGAGGGATCGAGGTTCTGGACAGCGGCGCGGGATTCTTATA
AGATTGGACGGCGGCGTGGGACCTTTTTTGACGGCAGCGTGGGAGTTTAG
GACTGCAGCGCGGGAATTTCTGACGGCGGCGAGGGATCCTCGGTTTAATT
TTTCGGCAATTGGTCAGCCATCGCATTCCATATACATGCGTGTCACTCCA
TTTATTGATAGTTCAAAGCTGATATACTTAGGTGGCGTGATCAGCGTAAT
CACGCCTCCAAAAATACGCATCCCTGATTATCCCTTATATGGAAAATCTT
CATTGAATATACATTTATTTACACTTCTAGAATACCGGAAAGCAACCCCA
ATACTTATGCCGATGATTCTAATACATGAAACGATTTAAAAGCTTTCTAG
ACC
BS10882.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 18:58:06 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 15:01:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:01:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 230515..230937 | 17..439 | 2100 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:01:46 has no hits.
BS10882.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:12:57 Download gff for
BS10882.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230503..230937 | 1..439 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:12:57 Download gff for
BS10882.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230503..230937 | 1..439 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:05:27 Download gff for
BS10882.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230503..230937 | 1..439 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:05:27 Download gff for
BS10882.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230503..230937 | 1..439 | 98 | | Plus |
BS10882.complete Sequence
455 bp assembled on 2006-11-01
> BS10882.complete
GAAGTTATCAGTCGACATGGAGATGACTGCGGCGTGGGAGACGGAGATCG
GGACTGCAGCGAGGGATCGAGGTTCTGGACAGCGGCGCGGGATTCTTATA
AGATTGGACGGCGGCGTGGGACCTTTTTTGACGGCAGCGTGGGAGTTTAG
GACTGCAGCGCGGGAATTTCTGACGGCGGCGAGGGATCCTCGGTTTAATT
TTTCGGCAATTGGTCAGCCATCGCATTCCATATACATGCGTGTCACTCCA
TTTATTGATAGTTCAAAGCTGATATACTTAGGTGGCGTGATCAGCGTAAT
CACGCCTCCAAAAATACGCATCCCTGATTATCCCTTATATGGAAAATCTT
CATTGAATATACATTTATTTACACTTCTAGAATACCGGAAAGCAACCCCA
ATACTTATGCCGATGATTCTAATACATGAAACGATTTAAAAGCTTTCTAG
ACCAT
BS10882.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 06:50:39 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 06:50:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:50:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 230515..230937 | 17..439 | 2100 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:50:38 has no hits.
BS10882.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 23:52:47 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:55:53 Download gff for
BS10882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230515..230935 | 17..437 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:55:53 Download gff for
BS10882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230515..230935 | 17..437 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:56:11 Download gff for
BS10882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230515..230935 | 17..437 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:56:11 Download gff for
BS10882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230515..230935 | 17..437 | 99 | | Plus |
BS10882.pep Sequence
Translation from 16 to 438
> BS10882.pep
MEMTAAWETEIGTAARDRGSGQRRGILIRLDGGVGPFLTAAWEFRTAARE
FLTAARDPRFNFSAIGQPSHSIYMRVTPFIDSSKLIYLGGVISVITPPKI
RIPDYPLYGKSSLNIHLFTLLEYRKATPILMPMILIHETI*
Sequence BS10882.pep has no blast hits.