Clone Sequence Records
BS10914.complete Sequence
3257 bp assembled on 2009-12-07
GenBank Submission: KX803864
> BS10914.complete
GAAGTTATCAGTCGACATGGCCTGGCGATTCAAGGCTTCCAAGTACAAAA
ATGCCGCACCCATTGTGCCCAAGGCGGAGGCATGCGTCCGCGAGATCTGC
GTGGGCAGCTACCAGACGTACGGTAACAACATCGCCGCCTCCGGCGCCTT
CATGGCCTTCAACTGGGAGCACACCGGGTCCAGCGTCGCTGTCCTCCCGC
TGGACGACTGCGGCCGGAAGAGCAAGACCATGCCGCTGCTCCATGGACAC
ACGGACACAGTGACGGACCTTAAGTTCTCCCCGTTCCACGACGGGCTGCT
GGCCACCGCCTCGCAGGATTGCCTGGTCAAGATCTGGCACATACCGGAAA
AAGGTCTGGAGCAGTCGCTTTCCGATCCGGAGGCAATCTTCTCACACAAG
CAGAGACGCGTAGAGACAGTGGGCTTCCATCCAACAGCAGATGGTTTGAT
GTACTCCACAGCCGCCGGCTGCGTGGCTCTCTTCGATCTCAGCACTCAAA
AGGAGATATTCTCGAACAATGAGCACCCCGAGGTGATACAGTCGGCCAGT
TGGCGCGAGGACGGTTCTGTTTTGGCCACCAGTTGCAAGGATAAGAATGT
GCGAATCTTCGATCCCCGTGCCGCTGGTTCACCCATCCAGCTGACTGCTG
AATCGCATCAGAGCATCAAGGATTCGCGGGTGGTGTGGTTAGGCAATCAG
CATCGCATCCTGACCACTGGCTTCGATGCGGCCCGCCTGCGACAGGTGAT
CATCCGTGATGTGCGCAACTTCAACACTCCAGAGAAAACTCTCGAACTGG
ACTGCTCGACGGGCATATTGATGCCCCTCTTCGATCCCGACACCAATATG
CTTTTCCTAGCCGGAAAGGGTGACACAACCATTAACTATTTGGAGATTAC
GGACAAGGATCCGTATTTGATTGAGGGCTTGCGTCATACTGGCGAGCAGA
CGAAGGGAGCTTGTCTCGTGCCCAAGCGGGCACTTAAAGTCATGGAAGCA
GAGGTTAACCGGGTGTTGCAATTGACCTCCAACATGGTCATACCCATCAT
GTACCAGGTGCCCAGAAAGACATACCGTGATTTCCACGCCGATCTATATC
CGGAGACCACTGGCTACAAGACAGAACTGGTGGCCGGCGAGTGGCTAAAT
GGCAGCAACCAGGCGGTGCCCAAGATGAGCCTTGATCCCGCCAAGCGTGA
GCATGGCGATGAGCCAATTATTCCACGTTTGGGTCCCAAGCCCTTCTCCA
GCACCACAGGTGACGTTTCGTTTGACAAGGTGTTCGCCGTTCCCTTGGCA
CCGGGATCCCACGAGAATATCTCGAACGTGGGTCAGGACAGCGGAGTGGA
GATGACACCAGCTCAGGGAGCCAAACCGGATCTCATTGTGGAAATCGAAA
TTAAAAAGAAACACGAAAGGGAACCTGCTGTGTCCGGAAATGGAGTCCAG
AAGTCACTGACCACTTCGGAGCGCCGTAAGATATTCGAGCAGAACTCTGA
GTCATCGGAGAACTCGACGGAGGGGGAAGATCGCACGGATGCGGATCTGC
GAAGAAACTGCACCTCCAGGAGCAGCTTTGCCGAGCGACGGCGCATATAC
GAGAATCGTTCCAAGAGTCAGGTGGACGAGAAGCCTCAGTCGCCAGTGCC
ATTACGTCGCGAGCACTCCAAAGTGGAGCCGCTGAAGCCCAACCAACAGC
AGCAGCAGCAGGGCAATGTGATCGACACCAAGCGCATCTCTGTTCCAGAG
GGCAAATTAATGGAGGAGCATCGCCGCGGAAATGGCGCTGGACTCAAGAA
GTCCGCCACTGAGGCGGCTTTTAGCGCTGCCAGCACCAAGCGCACTTCCA
CCGTCTTCGGCAAGGTGTCCAAGTTCAGGCACTTGAAGGGCACACCCGGT
CACAAGTCCACGCACATCGAGAACTTGCGCAATCTAAGTCGCCAGATTCC
GGGCGAATGCAATGGCTTCCACGCTAACCAGGAGCGAGTTGCCGTGCCAC
TTTCGGGGCCCGGCGGCAAGATAGCCATCTTTGAGTTGAGCCGCCCTGGA
CGGTTGCCCGATGGTGTGATTCCGTCACTTGTGAACGGCAGCAACATCAT
GGACTTCCAGTGGGATCCGTTCGATGCCCAGCGATTGGCTGTGGCATGCG
ACGATGGCATTGTAAAGATCTGGCATATTGAAGCCGGTGGATTGAGTGAG
CCGACAAACACACCTGCCGGCGAGCTAACCGCTCATCTGGACAAGATTTA
CTTCATACGCTTCCACCCGCTGGCTGCTGATGTTCTGTTAACCGCCAGCT
ACGATATGACCATCAAGCTGTGGGATTTGCGCACCATGACCGAGAAATGC
TCGCTTTCGGGGCATACAGATCAAATCTTTGACTTCGCCTGGAGTCCCTG
CGGCCGATTGGGCGCCACCGTGTGCAAGGATGGCAAGATTAGGGTGTACA
ACCCAAGGAAATCGGAGACACCCATACGGGAGGGCAATGGACCGGTCGGT
ACTCGTGGAGCTCGGATCACCTGGGCGTTGGAGGGACATTACATCGTCTG
CACTGGTTTTGACAAGGTTTCGGAGCGACAGATCAGCGTGTACAATGCAC
AAAAGTTGTCCGCCCCATTGAACACTGCCAGTTTGGATGTCTCACCCTCC
ATACTGATTCCATTCTATGACGAAGATAGCTCCACACTGTTTGTTACGGG
CAAGGGTGACTCCACAATCTACTGTTACGAAATCACCGACGAGGAGCCGT
ACATCTGCCCACTGTCGCACCATCGTTGCACCTCGCTGCACCAGGGCCTC
AGTTTCCTCACCAAGAACCACTGCGACGTGGCCAGCGTGGAGTTCTCAAA
GGCCTATCGGCTAACCAATACCACAATTGAACCCCTGAGTTTCACAGTGC
CCCGCATCAAGAGCGAGCTGTTCCAAGACGATCTGTTCCCACCCACACGC
ATCACCTGGAGCGCCACACTGAGCTCCGAGGATTGGTTCGCTAGCAATGA
TAAGGCGGCACCCAAAGTCAGCCTCAAGCCCGAGGGCATGGAAACTTTAT
CTTCCATACAGCAAGTGCCAGCGCAGCCCGTCAAGAAGCCAGATCATCCC
CAGTTCGGTGGCCAGAAGTCCGAGTACGAGATCAACAAACAGCAGGAGAT
CCAGAAATCGGTTAGCGCGCGCATGGAATTCACCACCAAGCTGGAGCAGG
ACGACATGGAGGGTGTGGATGAGAACGAGTGGCAGGAGTAGAAGCTTTCT
AGACCAT
BS10914.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:03:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pod1-RD | 3225 | CG4532-PD | 1..3225 | 17..3241 | 16125 | 100 | Plus |
pod1-RC | 3225 | CG4532-PC | 1..3225 | 17..3241 | 16125 | 100 | Plus |
pod1-RB | 3225 | CG4532-PB | 1..3225 | 17..3241 | 16125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:03:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pod1-RD | 5837 | CG4532-RD | 354..3579 | 16..3241 | 16130 | 100 | Plus |
pod1-RC | 5737 | CG4532-RC | 254..3479 | 16..3241 | 16130 | 100 | Plus |
pod1-RB | 5797 | CG4532-RB | 314..3539 | 16..3241 | 16130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:03:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6809727..6810639 | 1654..2566 | 4565 | 100 | Plus |
X | 23542271 | X | 6806881..6807437 | 513..1069 | 2785 | 100 | Plus |
X | 23542271 | X | 6810702..6811047 | 2566..2911 | 1730 | 100 | Plus |
X | 23542271 | X | 6805909..6806220 | 16..327 | 1560 | 100 | Plus |
X | 23542271 | X | 6806617..6806804 | 325..512 | 940 | 100 | Plus |
X | 23542271 | X | 6808812..6808995 | 1223..1406 | 920 | 100 | Plus |
X | 23542271 | X | 6809483..6809657 | 1479..1653 | 875 | 100 | Plus |
X | 23542271 | X | 6807494..6807648 | 1068..1222 | 775 | 100 | Plus |
X | 23542271 | X | 6811115..6811252 | 2910..3047 | 690 | 100 | Plus |
X | 23542271 | X | 6811317..6811417 | 3048..3148 | 505 | 100 | Plus |
X | 23542271 | X | 6811478..6811572 | 3147..3241 | 475 | 100 | Plus |
X | 23542271 | X | 6809064..6809137 | 1407..1480 | 370 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:03:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2311..2388 | 1662..1738 | 117 | 62.8 | Plus |
BS10914.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:45:06 Download gff for
BS10914.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RB | 514..3738 | 17..3241 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:04:51 Download gff for
BS10914.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RB | 514..3738 | 17..3241 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:00:21 Download gff for
BS10914.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RB | 514..3738 | 17..3241 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:03:08 Download gff for
BS10914.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RB | 315..3539 | 17..3241 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:03:08 Download gff for
BS10914.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6805910..6806218 | 17..325 | 100 | -> | Plus |
X | 6806618..6806804 | 326..512 | 100 | -> | Plus |
X | 6811480..6811572 | 3149..3241 | 100 | | Plus |
X | 6806881..6807437 | 513..1069 | 100 | -> | Plus |
X | 6807496..6807648 | 1070..1222 | 100 | -> | Plus |
X | 6808812..6808995 | 1223..1406 | 100 | -> | Plus |
X | 6809064..6809137 | 1407..1480 | 100 | -> | Plus |
X | 6809485..6809657 | 1481..1653 | 100 | -> | Plus |
X | 6809727..6810638 | 1654..2565 | 100 | -> | Plus |
X | 6810702..6811047 | 2566..2911 | 100 | -> | Plus |
X | 6811117..6811252 | 2912..3047 | 100 | -> | Plus |
X | 6811317..6811417 | 3048..3148 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:04:51 Download gff for
BS10914.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6699943..6700251 | 17..325 | 100 | -> | Plus |
arm_X | 6700651..6700837 | 326..512 | 100 | -> | Plus |
arm_X | 6700914..6701470 | 513..1069 | 100 | -> | Plus |
arm_X | 6701529..6701681 | 1070..1222 | 100 | -> | Plus |
arm_X | 6702845..6703028 | 1223..1406 | 100 | -> | Plus |
arm_X | 6703097..6703170 | 1407..1480 | 100 | -> | Plus |
arm_X | 6703518..6703690 | 1481..1653 | 100 | -> | Plus |
arm_X | 6703760..6704671 | 1654..2565 | 100 | -> | Plus |
arm_X | 6704735..6705080 | 2566..2911 | 100 | -> | Plus |
arm_X | 6705150..6705285 | 2912..3047 | 100 | -> | Plus |
arm_X | 6705350..6705450 | 3048..3148 | 100 | -> | Plus |
arm_X | 6705513..6705605 | 3149..3241 | 100 | | Plus |
BS10914.5prime Sequence
744 bp (718 high quality bases) assembled on 2006-04-19
> BS10914.5prime
GAAGTTATCAGTCGACATGGCCTGGCGATTCAAGGCTTCCAAGTACAAAA
ATGCCGCACCCATTGTGCCCAAGGCGGAGGCATGCGTCCGCGAGATCTGC
GTGGGCAGCTACCAGACGTACGGTAACAACATCGCCGCCTCCGGCGCCTT
CATGGCCTTCAACTGGGAGCACACCGGGTCCAGCGTCGCTGTCCTCCCGC
TGGACGACTGCGGCCGGAAGAGCAAGACCATGCCGCTGCTCCATGGACAC
ACGGACACAGTGACGGACCTTAAGTTCTCCCCGTTCCACGACGGGCTGCT
GGCCACCGCCTCGCAGGATTGCCTGGTCAAGATCTGGCACATACCGGAAA
AAGGTCTGGAGCAGTCGCTTTCCGATCCGGAGGCAATCTTCTCACACAAG
CAGAGACGCGTAGAGACAGTGGGCTTCCATCCAACAGCAGATGGTTTGAT
GTACTCCACAGCCGCCGGCTGCGTGGCTCTCTTCGATCTCAGCACTCAAA
AGGAGATATTCTCGAACAATGAGCACCCCGAGGTGATACAGTCGGCCAGT
TGGCGCGAGGACGGTTCTGTTTTGGCCACCAGTTGCAAGGATAAGAATGT
GCGAATCTTCGATCCCCGTGCCGCTGGTTCACCCATCCAGCTGACTGCTG
AATCGCATCAGAGCATCAAGGATTCGCGGGTGGTGTGGTTAGGCAATCAG
CATCGCATCCTGACCACTGGCTTCGATGCCGCCCGCCTGCGACA
BS10914.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:58:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4532-PE | 3225 | pod1-RE | 1..728 | 17..744 | 3615 | 99.8 | Plus |
CG4532-PA | 3225 | pod1-RA | 1..728 | 17..744 | 3615 | 99.8 | Plus |
CG4532-PB | 3225 | pod1-RB | 1..728 | 17..744 | 3615 | 99.8 | Plus |
CG4532-PC | 3225 | pod1-RC | 1..728 | 17..744 | 3615 | 99.8 | Plus |
CG4532-PD | 3225 | pod1-RD | 1..728 | 17..744 | 3615 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:09:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pod1-RG | 6374 | CG4532-RG | 315..1043 | 16..744 | 3630 | 99.9 | Plus |
pod1-RF | 6031 | CG4532-RF | 315..1043 | 16..744 | 3630 | 99.9 | Plus |
pod1-RD | 5837 | CG4532-RD | 354..1082 | 16..744 | 3630 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:09:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6805909..6806220 | 16..327 | 1560 | 100 | Plus |
X | 23542271 | X | 6806881..6807112 | 513..744 | 1145 | 99.6 | Plus |
X | 23542271 | X | 6806617..6806804 | 325..512 | 940 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 09:09:45 has no hits.
BS10914.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:53:38 Download gff for
BS10914.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-PD | 1..727 | 17..743 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:19:17 Download gff for
BS10914.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4532-PD | 1..727 | 17..743 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:57:48 Download gff for
BS10914.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RD | 347..1081 | 10..743 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:00:35 Download gff for
BS10914.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RD | 347..1081 | 10..743 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 13:00:35 Download gff for
BS10914.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6805902..6806218 | 10..325 | 99 | -> | Plus |
X | 6806618..6806804 | 326..512 | 100 | -> | Plus |
X | 6806881..6807111 | 513..743 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:57:48 Download gff for
BS10914.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6699935..6700251 | 10..325 | 99 | -> | Plus |
arm_X | 6700651..6700837 | 326..512 | 100 | -> | Plus |
arm_X | 6700914..6701144 | 513..743 | 99 | | Plus |
BS10914.3prime Sequence
777 bp (753 high quality bases) assembled on 2006-04-19
> BS10914.3prime
ATGGTCTAGAAAGCTTCTACTCCTGCCACTCGTTCTCATCCACACCCTCC
ATGTCGTCCTGCTCCAGCTTGGTGGTGAATTCCATGCGCGCGCTAACCGA
TTTCTGGATCTCCTGCTGTTTGTTGATCTCGTACTCGGACTTCTGGCCAC
CGAACTGGGGATGATCTGGCTTCTTGACGGGCTGCGCTGGCACTTGCTGT
ATGGAAGATAAAGTTTCCATGCCCTCGGGCTTGAGGCTGACTTTGGGTGC
CGCCTTATCATTGCTAGCGAACCAATCCTCGGAGCTCAGTGTGGCGCTCC
AGGTGATGCGTGTGGGTGGGAACAGATCGTCTTGGAACAGCTCGCTCTTG
ATGCGGGGCACTGTGAAACTCAGGGGTTCAATTGTGGTATTGGTTAGCCG
ATAGGCCTTTGAGAACTCCACGCTGGCCACGTCGCAGTGGTTCTTGGTGA
GGAAACTGAGGCCCTGGTGCAGCGAGGTGCAACGATGGTGCGACAGTGGG
CAGATGTACGGCTCCTCGTCGGTGATTTCGTAACAGTAGATTGTGGAGTC
ACCCTTGCCCGTAACAAACAGTGTGGAGCTATCTTCGTCATAGAATGGAA
TCAGTATGGAGGGTGAGACATCCAAACTGGCAGTGTTCAATGGGGCGGAC
AACTTTTGTGCATTGTACACGCTGATCTGTCGCTCCGAAACCTTGTCAAA
ACCAGTGCAGACGATGTAATGTCCCTCCAACGCCCAGGTGATCCGAGCTC
CACGAGTACCGACCGGGCCATTGCCCT
BS10914.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:58:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4532-PE | 3225 | pod1-RE | 2465..3225 | 777..17 | 3780 | 99.8 | Minus |
CG4532-PA | 3225 | pod1-RA | 2465..3225 | 777..17 | 3780 | 99.8 | Minus |
CG4532-PB | 3225 | pod1-RB | 2465..3225 | 777..17 | 3780 | 99.8 | Minus |
CG4532-PC | 3225 | pod1-RC | 2465..3225 | 777..17 | 3780 | 99.8 | Minus |
CG4532-PD | 3225 | pod1-RD | 2465..3225 | 777..17 | 3780 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:37:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pod1-RG | 6374 | CG4532-RG | 3356..4116 | 777..17 | 3790 | 99.9 | Minus |
pod1-RF | 6031 | CG4532-RF | 3323..4083 | 777..17 | 3790 | 99.9 | Minus |
pod1-RD | 5837 | CG4532-RD | 2819..3579 | 777..17 | 3790 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:36:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6810702..6811047 | 692..347 | 1730 | 100 | Minus |
X | 23542271 | X | 6811115..6811252 | 348..211 | 690 | 100 | Minus |
X | 23542271 | X | 6811317..6811417 | 210..110 | 505 | 100 | Minus |
X | 23542271 | X | 6811478..6811572 | 111..17 | 475 | 100 | Minus |
X | 23542271 | X | 6810554..6810639 | 777..692 | 415 | 98.8 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:36:58 has no hits.
BS10914.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:53:37 Download gff for
BS10914.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-PD | 2465..3225 | 17..777 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:19:16 Download gff for
BS10914.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4532-PD | 2465..3225 | 17..777 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:43:55 Download gff for
BS10914.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RD | 2819..3587 | 6..777 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:41:35 Download gff for
BS10914.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pod1-RD | 2819..3587 | 6..777 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:41:35 Download gff for
BS10914.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6810554..6810638 | 693..777 | 98 | -> | Minus |
X | 6810702..6811047 | 347..692 | 100 | -> | Minus |
X | 6811117..6811252 | 211..346 | 100 | -> | Minus |
X | 6811317..6811417 | 110..210 | 100 | -> | Minus |
X | 6811480..6811580 | 6..109 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:43:55 Download gff for
BS10914.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6704587..6704671 | 693..777 | 98 | -> | Minus |
arm_X | 6704735..6705080 | 347..692 | 100 | -> | Minus |
arm_X | 6705150..6705285 | 211..346 | 100 | -> | Minus |
arm_X | 6705350..6705450 | 110..210 | 100 | -> | Minus |
arm_X | 6705513..6705613 | 6..109 | 95 | | Minus |
BS10914.pep Sequence
Translation from 16 to 3240
> BS10914.pep
MAWRFKASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGAFMAFNW
EHTGSSVAVLPLDDCGRKSKTMPLLHGHTDTVTDLKFSPFHDGLLATASQ
DCLVKIWHIPEKGLEQSLSDPEAIFSHKQRRVETVGFHPTADGLMYSTAA
GCVALFDLSTQKEIFSNNEHPEVIQSASWREDGSVLATSCKDKNVRIFDP
RAAGSPIQLTAESHQSIKDSRVVWLGNQHRILTTGFDAARLRQVIIRDVR
NFNTPEKTLELDCSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPY
LIEGLRHTGEQTKGACLVPKRALKVMEAEVNRVLQLTSNMVIPIMYQVPR
KTYRDFHADLYPETTGYKTELVAGEWLNGSNQAVPKMSLDPAKREHGDEP
IIPRLGPKPFSSTTGDVSFDKVFAVPLAPGSHENISNVGQDSGVEMTPAQ
GAKPDLIVEIEIKKKHEREPAVSGNGVQKSLTTSERRKIFEQNSESSENS
TEGEDRTDADLRRNCTSRSSFAERRRIYENRSKSQVDEKPQSPVPLRREH
SKVEPLKPNQQQQQQGNVIDTKRISVPEGKLMEEHRRGNGAGLKKSATEA
AFSAASTKRTSTVFGKVSKFRHLKGTPGHKSTHIENLRNLSRQIPGECNG
FHANQERVAVPLSGPGGKIAIFELSRPGRLPDGVIPSLVNGSNIMDFQWD
PFDAQRLAVACDDGIVKIWHIEAGGLSEPTNTPAGELTAHLDKIYFIRFH
PLAADVLLTASYDMTIKLWDLRTMTEKCSLSGHTDQIFDFAWSPCGRLGA
TVCKDGKIRVYNPRKSETPIREGNGPVGTRGARITWALEGHYIVCTGFDK
VSERQISVYNAQKLSAPLNTASLDVSPSILIPFYDEDSSTLFVTGKGDST
IYCYEITDEEPYICPLSHHRCTSLHQGLSFLTKNHCDVASVEFSKAYRLT
NTTIEPLSFTVPRIKSELFQDDLFPPTRITWSATLSSEDWFASNDKAAPK
VSLKPEGMETLSSIQQVPAQPVKKPDHPQFGGQKSEYEINKQQEIQKSVS
ARMEFTTKLEQDDMEGVDENEWQE*
BS10914.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:22:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pod1-PD | 1074 | CG4532-PD | 1..1074 | 1..1074 | 5651 | 100 | Plus |
pod1-PC | 1074 | CG4532-PC | 1..1074 | 1..1074 | 5651 | 100 | Plus |
pod1-PB | 1074 | CG4532-PB | 1..1074 | 1..1074 | 5651 | 100 | Plus |
pod1-PA | 1074 | CG4532-PA | 1..1074 | 1..1074 | 5651 | 100 | Plus |
pod1-PE | 1074 | CG4532-PE | 1..1074 | 1..1074 | 5651 | 100 | Plus |