Clone BS10975 Report

Search the DGRC for BS10975

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:109
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptCG6287-RA
Protein status:BS10975.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS10975.3prime Sequence

911 bp (831 high quality bases) assembled on 2006-04-19

> BS10975.3prime
ATGGTCTAGAAAGCTTTCACTGGTAATGGGCGAGTGCCTCCTTGTTAATA
ACGCCCGCATAACTGGTGTACTTCGGCGAGGTTCCATTGAGGGCGATGAA
CTGCTCCGCCACCTCCACGGCAACACGGACCTGCGCCTCCGAAGTGCTCG
CGCCCAGATGCGGCGTGGCCACCACCTTGGGATGACTGATGAGGGCCTTG
GTGACCGCAGACTTTGGCGGCTCCTCGGGATAAACGTCGAAGGCCGCGCC
GGCCACTTTTCCGCTCTCAAGGCCATCGAGCACGGCCTGCTCGTCGATGA
TGCCGCCCCGGGCCACATTCACCACCTTAACGCCCTGTTTGCACTTGGCC
AGTGTCTCCGCCGATATGAGATTTCTGGTGGCTGGGATCAGCGGCGTGTG
CACGGTTATGTAGTCCGCCAGTGGCCAAATCTCCTCCAGCGTCATCTTCT
CGATGCCCGCCGCCTTGGCCTCAGCCTCCGTGGTGATGGGATCGTAACCA
ATAATCCGCATGCCCCAGGTCTTCATCCGAATGGCGACCTCGCGTCCAAT
GCGTCCCAATCCGAGAACGGCCAGGGTTTTTCCATACAGCTCTGTGCCGG
CATAGAGCTTCCTGTCCCAGCGACCCTCCTTCATGCTCTGACCGGCGGGG
ACGACGGGACGGGCCAGGGAGCCAATTAGGATGCACGTCAGCTCACAGGC
CGAAATGGAATTGCCACCCGGAGTGTTCAGGACAACGACATTTTGCGCTG
TGGCTGCGGGAACATCGATGTTGTCAACACCCGCCCCCGCACGGCCAACG
ACCTTCAGGCTGCCGGATCCGGCGGCCAAAACTTCCGCGGTTATTTTGGT
ATCCGAACGAACGATGGCTGCGTCGAAATTCTTAACTTCCTGACACAGTT
CCTCCACGGGG

BS10975.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:59:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG6287-PA 999 CG6287-RA 105..999 911..17 4475 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:52:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG6287-RA 1284 CG6287-RA 225..1120 911..16 4480 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:52:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11151670..11152026 16..372 1785 100 Plus
2L 23513712 2L 11152335..11152554 506..725 1100 100 Plus
2L 23513712 2L 11153410..11153566 726..882 785 100 Plus
2L 23513712 2L 11152139..11152276 373..510 675 99.3 Plus
Blast to na_te.dros performed on 2015-02-10 22:52:19 has no hits.

BS10975.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:55:22 Download gff for BS10975.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6287-PA 105..999 17..911 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:21:44 Download gff for BS10975.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6287-PA 105..999 17..911 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:58:32 Download gff for BS10975.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6287-RA 225..1122 13..911 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:20:13 Download gff for BS10975.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6287-RA 225..1122 13..911 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:20:13 Download gff for BS10975.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 11151668..11152026 13..372 99 <- Plus
2L 11152139..11152271 373..505 100 <- Plus
2L 11152335..11152554 506..725 100 <- Plus
2L 11153410..11153564 726..880 100 <- Plus
2L 11155083..11155113 881..911 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:58:32 Download gff for BS10975.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11151668..11152026 13..372 99 <- Plus
arm_2L 11152139..11152271 373..505 100 <- Plus
arm_2L 11152335..11152554 506..725 100 <- Plus
arm_2L 11153410..11153564 726..880 100 <- Plus
arm_2L 11155083..11155113 881..911 100   Plus

BS10975.5prime Sequence

776 bp (775 high quality bases) assembled on 2006-04-19

> BS10975.5prime
GAAGTTATCAGTCGACATGCCCCTCAATATAAGAAAAGTGCTGGTCTGCG
ATGCTGTGGACAAATCCTGCGTGGAGCTGCTGGAACAGCATGGGATTAAG
GTTACCTACAAACTAAAGCTCCCCGTGGAGGAACTGTGTCAGGAAGTTAA
GAATTTCGACGCAGCCATCGTTCGTTCGGATACCAAAATAACCGCGGAAG
TTTTGGCCGCCGGATCCGGCAGCCTGAAGGTCGTTGGCCGTGCGGGGGCG
GGTGTTGACAACATCGATGTTCCCGCAGCCACAGCGCAAAATGTCGTTGT
CCTGAACACTCCGGGTGGCAATTCCATTTCGGCCTGTGAGCTGACGTGCA
TCCTAATTGGCTCCCTGGCCCGTCCCGTCGTCCCCGCCGGTCAGAGCATG
AAGGAGGGTCGCTGGGACAGGAAGCTCTATGCCGGCACAGAGCTGTATGG
AAAAACCCTGGCCGTTCTCGGATTGGGACGCATTGGACGCGAGGTCGCCA
TTCGGATGAAGACCTGGGGCATGCGGATTATTGGTTACGATCCCATCACC
ACGGAGGCTGAGGCCAAGGCGGCGGGCATCGAGAAGATGACGCTGGAGGA
GATTTGGCCACTGGCGGACTACATAACCGTGCACACGCCGCTGATCCCAG
CCACCAGAAATCTCATATCGGCGGAGACACTGGCCAAGTGCAAACAGGGC
GTTAAGGTGGTGAATGTGGCCCGGGGCGGCATCATCGACGAGCAGGCCGT
GCTCGATGGCCTTGAGAGCGGAAAAG

BS10975.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:59:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG6287-PA 999 CG6287-RA 1..760 17..776 3800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:57:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG6287-RA 1284 CG6287-RA 121..880 17..776 3800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:57:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11152335..11152554 526..307 1100 100 Minus
2L 23513712 2L 11153410..11153566 306..150 785 100 Minus
2L 23513712 2L 11152139..11152276 659..522 675 99.3 Minus
2L 23513712 2L 11151910..11152026 776..660 585 100 Minus
2L 23513712 2L 11155516..11155601 102..17 430 100 Minus
2L 23513712 2L 11155083..11155136 151..98 270 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:57:26 has no hits.

BS10975.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:55:23 Download gff for BS10975.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6287-PA 1..760 17..776 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:21:45 Download gff for BS10975.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6287-PA 1..760 17..776 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:18:21 Download gff for BS10975.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6287-RA 121..880 17..776 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:04:11 Download gff for BS10975.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6287-RA 121..880 17..776 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:04:11 Download gff for BS10975.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 11152139..11152271 527..659 100 <- Minus
2L 11155518..11155601 17..100 100   Minus
2L 11152335..11152554 307..526 100 <- Minus
2L 11153410..11153564 152..306 100 <- Minus
2L 11155083..11155133 101..151 100 <- Minus
2L 11151910..11152026 660..776 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:18:21 Download gff for BS10975.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11155083..11155133 101..151 100 <- Minus
arm_2L 11155518..11155601 17..100 100   Minus
arm_2L 11151910..11152026 660..776 100 <- Minus
arm_2L 11152139..11152271 527..659 100 <- Minus
arm_2L 11152335..11152554 307..526 100 <- Minus
arm_2L 11153410..11153564 152..306 100 <- Minus

BS10975.complete Sequence

1031 bp assembled on 2006-11-01

GenBank Submission: FJ636748

> BS10975.complete
GAAGTTATCAGTCGACATGCCCCTCAATATAAGAAAAGTGCTGGTCTGCG
ATGCTGTGGACAAATCCTGCGTGGAGCTGCTGGAACAGCATGGGATTAAG
GTTACCTACAAACTAAAGCTCCCCGTGGAGGAACTGTGTCAGGAAGTTAA
GAATTTCGACGCAGCCATCGTTCGTTCGGATACCAAAATAACCGCGGAAG
TTTTGGCCGCCGGATCCGGCAGCCTGAAGGTCGTTGGCCGTGCGGGGGCG
GGTGTTGACAACATCGATGTTCCCGCAGCCACAGCGCAAAATGTCGTTGT
CCTGAACACTCCGGGTGGCAATTCCATTTCGGCCTGTGAGCTGACGTGCA
TCCTAATTGGCTCCCTGGCCCGTCCCGTCGTCCCCGCCGGTCAGAGCATG
AAGGAGGGTCGCTGGGACAGGAAGCTCTATGCCGGCACAGAGCTGTATGG
AAAAACCCTGGCCGTTCTCGGATTGGGACGCATTGGACGCGAGGTCGCCA
TTCGGATGAAGACCTGGGGCATGCGGATTATTGGTTACGATCCCATCACC
ACGGAGGCTGAGGCCAAGGCGGCGGGCATCGAGAAGATGACGCTGGAGGA
GATTTGGCCACTGGCGGACTACATAACCGTGCACACGCCGCTGATCCCAG
CCACCAGAAATCTCATATCGGCGGAGACACTGGCCAAGTGCAAACAGGGC
GTTAAGGTGGTGAATGTGGCCCGGGGCGGCATCATCGACGAGCAGGCCGT
GCTCGATGGCCTTGAGAGCGGAAAAGTGGCCGGCGCGGCCTTCGACGTTT
ATCCCGAGGAGCCGCCAAAGTCTGCGGTCACCAAGGCCCTCATCAGTCAT
CCCAAGGTGGTGGCCACGCCGCATCTGGGCGCGAGCACTTCGGAGGCGCA
GGTCCGTGTTGCCGTGGAGGTGGCGGAGCAGTTCATCGCCCTCAATGGAA
CCTCGCCGAAGTACACCAGTTATGCGGGCGTTATTAACAAGGAGGCACTC
GCCCATTACCAGTGAAAGCTTTCTAGACCAT

BS10975.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:26:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG6287-RA 999 CG6287-PA 1..999 17..1015 4995 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:26:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG6287-RA 1284 CG6287-RA 121..1120 17..1016 5000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:26:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11151670..11152026 1016..660 1785 100 Minus
2L 23513712 2L 11152335..11152554 526..307 1100 100 Minus
2L 23513712 2L 11153410..11153566 306..150 785 100 Minus
2L 23513712 2L 11152139..11152276 659..522 675 99.3 Minus
2L 23513712 2L 11155516..11155601 102..17 430 100 Minus
2L 23513712 2L 11155083..11155136 151..98 270 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:26:42 has no hits.

BS10975.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:52:17 Download gff for BS10975.complete
Subject Subject Range Query Range Percent Splice Strand
CG6287-RA 1..999 17..1015 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:27:40 Download gff for BS10975.complete
Subject Subject Range Query Range Percent Splice Strand
CG6287-RA 116..1117 17..1019 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:02 Download gff for BS10975.complete
Subject Subject Range Query Range Percent Splice Strand
CG6287-RA 121..1118 17..1014 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:52:18 Download gff for BS10975.complete
Subject Subject Range Query Range Percent Splice Strand
CG6287-RA 116..1117 17..1019 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:18:39 Download gff for BS10975.complete
Subject Subject Range Query Range Percent Splice Strand
CG6287-RA 121..1118 17..1014 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:18:39 Download gff for BS10975.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11153410..11153564 152..306 100 <- Minus
2L 11155083..11155133 101..151 100 <- Minus
2L 11155518..11155601 17..100 100   Minus
2L 11152335..11152554 307..526 100 <- Minus
2L 11151672..11152026 660..1014 100 <- Minus
2L 11152139..11152271 527..659 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:02 Download gff for BS10975.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11151672..11152026 660..1014 100 <- Minus
arm_2L 11152139..11152271 527..659 100 <- Minus
arm_2L 11152335..11152554 307..526 100 <- Minus
arm_2L 11153410..11153564 152..306 100 <- Minus
arm_2L 11155083..11155133 101..151 100 <- Minus
arm_2L 11155518..11155601 17..100 100   Minus

BS10975.pep Sequence

Translation from 16 to 1014

> BS10975.pep
MPLNIRKVLVCDAVDKSCVELLEQHGIKVTYKLKLPVEELCQEVKNFDAA
IVRSDTKITAEVLAAGSGSLKVVGRAGAGVDNIDVPAATAQNVVVLNTPG
GNSISACELTCILIGSLARPVVPAGQSMKEGRWDRKLYAGTELYGKTLAV
LGLGRIGREVAIRMKTWGMRIIGYDPITTEAEAKAAGIEKMTLEEIWPLA
DYITVHTPLIPATRNLISAETLAKCKQGVKVVNVARGGIIDEQAVLDGLE
SGKVAGAAFDVYPEEPPKSAVTKALISHPKVVATPHLGASTSEAQVRVAV
EVAEQFIALNGTSPKYTSYAGVINKEALAHYQ*

BS10975.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:05:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG6287-PA 332 CG6287-PA 1..332 1..332 1675 100 Plus
CtBP-PI 379 CG7583-PI 91..337 69..307 318 31.4 Plus
CtBP-PF 383 CG7583-PF 91..337 69..307 318 31.4 Plus
CtBP-PG 473 CG7583-PG 91..337 69..307 318 31.4 Plus
CtBP-PJ 476 CG7583-PJ 91..337 69..307 318 31.4 Plus