Clone Sequence Records
BS10993.3prime Sequence
785 bp (783 high quality bases) assembled on 2006-04-19
> BS10993.3prime
ATGGTCTAGAAAGCTTTCATAACACGTCCAGGTAAAGGCCAGAATCGGGC
GCTATATAGCAACCGCCGCAGTATCCTCCGCAGAATCCCCTTCGCATCTG
CGTGGTCGTATCAAACTCACTGATACGCTTCATGACCGAGTACTGGCCAT
GCATCCGCCACACGGTTCCCGGTCGTATGGAGAAGTCCGTGTCCTTCATG
TTAATCGAGAAGTCGCCCTGCGGACACTGGCCAATGCGATTGTAGCAATC
GCCCGCTGATCCCAGCTTCTGAGCCAATCCTCGCGAATCGGCGAACTTGA
AGTCGTTGTCCATGATGCGCAGATCGGTGATATTCAGCCGCAGCTTTCTG
AAGTGCGTCCGGCCGGAGTTCTGATCGTTGTAGTACTCGTGGCCTCGCGA
CTCCGGCGGACAGCTGTTGGTCTGTTTCGTCCTGTACTCGTAGTATATGG
AGTAGTTCTCCTGCGGATCCACGTTCACGTACTCCTGTGGCGTCCTGCTG
TTCATCCCGTGGCAGTAGATGTGCACCATTCGCGATCTCACCTCCAGCTG
GTAGTTGCCATCCTTGTTGTAGCCGTGCATCTCCTTCAGGTCCGCACAGC
TTCTCGGTGTTCCGCGATTCCGTGAGCCTCCGATTGAATTCAAGCTCCTG
CTGCTACTCACTCCAGTGCCCCTCGGTCTGCTGCTGATGCTGCTCCCGAT
GGCACTTCTCCTTCGGCAATGTGGCGGCGGAGTGCAGCTGTGACGCTCCA
CCCTGGCTCTCGTGGGACACGCGATGCGACCCTTG
BS10993.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:00:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14869-PB | 5067 | CG14869-RB | 4299..5067 | 785..17 | 3845 | 100 | Minus |
| CG14869-PA | 4614 | CG14869-RA | 3846..4614 | 785..17 | 3845 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 16:53:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AdamTS-A-RC | 6164 | CG14869-RC | 4403..5171 | 785..17 | 3845 | 100 | Minus |
| AdamTS-A-RE | 5932 | CG14869-RE | 4171..4939 | 785..17 | 3845 | 100 | Minus |
| AdamTS-A-RB | 6965 | CG14869-RB | 5204..5972 | 785..17 | 3845 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 16:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15443404..15444073 | 116..785 | 3350 | 100 | Plus |
| 3R | 32079331 | 3R | 15443239..15443339 | 17..117 | 505 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-03 16:53:50 has no hits.
BS10993.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:55:45 Download gff for
BS10993.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14869-PB | 4299..5067 | 17..785 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:22:11 Download gff for
BS10993.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14869-PA | 3846..4614 | 17..785 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:30:49 Download gff for
BS10993.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14869-RB | 5204..5972 | 17..785 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 18:57:56 Download gff for
BS10993.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AdamTS-A-RB | 5204..5972 | 17..785 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 18:57:56 Download gff for
BS10993.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15443239..15443337 | 17..115 | 100 | <- | Plus |
| 3R | 15443404..15444073 | 116..785 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:30:49 Download gff for
BS10993.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11268961..11269059 | 17..115 | 100 | <- | Plus |
| arm_3R | 11269126..11269795 | 116..785 | 100 | | Plus |
BS10993.5prime Sequence
868 bp (727 high quality bases) assembled on 2006-04-19
> BS10993.5prime
GAAGTTATCAGTCGACATGTCCATGCCGGATGCCGGTTCACTTAAATCGC
CCGCCGGCGGCCAGGAGGTCGAGTGCCATCGCCTGCTGTCGGACCTGCCC
GCCTTCGCGTATCCCAGCACCACACTGCGGTCCACAACTTCTGGTCACAG
CACTGGCACGAATAGTACCACTGTCTGCGAATCTCCCGGTGCTCGGGATC
GTACCTCCTTCGCGTGCTCCTCCTCTTGCGTATCATCCGCCTGCTCAGCC
ACCGCCTCCGATGACGACGAGGATGAGCGTGCCCTTGAGCGCTGTCTGCG
TGGGACGACGGACGACCTTGGGGAGTCCGGCCTGCGGTATTCGCTGAAAG
GACCACCGCCGGAGCTCTACTCGGCCAAGAAGGACTTCATCAGCAAGGGT
CCGCTGCTGGGCAGACAGCTCGAGGTGAAGAAGAGGTGTGAATGGTGGTG
CCACAAGTACATTCAAAAGATGTCCACCCACTGGCGGCAGAATGCCTGCC
TGTATGCCTGCTGCATCGCTTTTCTGCTGGGCATGCTTATCATGTTCCAT
CTCGGTTTGCGAAGTGCCCATAAGGGCCAAGAGGAGCTGCCACAGAGCAC
GCACCCACTAGCCAACAGTCCACCTGCTACACCAGCCACGCTCCATCCCA
GAAGGCTTGATAACGACACGTCGACGGACCACGAGCCACCCGATGGCTTA
GACGATCTGGACGAGGAGGAGCACAGCGCCTTCGTGATGCCCACCAAGGT
CTACAACTACAGTCTCAGCGAAGCTGGATCTGATCTACGAGTCGAAACGA
AACAGCGACATCAACAGTTTCCTAAAAGAGTCCGCATCGGCCTTTGCCCT
GACGGGAACGTATCGCAA
BS10993.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:00:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14869-PB | 5067 | CG14869-RB | 1..760 | 17..776 | 3800 | 100 | Plus |
| CG14869-PA | 4614 | CG14869-RA | 1..307 | 470..776 | 1535 | 100 | Plus |
| CG14869-PB | 5067 | CG14869-RB | 760..851 | 777..868 | 435 | 98.9 | Plus |
| CG14869-PA | 4614 | CG14869-RA | 307..398 | 777..868 | 435 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:42:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AdamTS-A-RB | 6965 | CG14869-RB | 901..1756 | 12..868 | 4230 | 99.6 | Plus |
| AdamTS-A-RC | 6164 | CG14869-RC | 505..955 | 417..868 | 2220 | 99.6 | Plus |
| AdamTS-A-RE | 5932 | CG14869-RE | 273..723 | 417..868 | 2220 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:42:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15474887..15475293 | 418..12 | 2020 | 99.8 | Minus |
| 3R | 32079331 | 3R | 15449337..15449748 | 828..416 | 2015 | 99.8 | Minus |
| 3R | 32079331 | 3R | 15449237..15449278 | 868..827 | 195 | 97.6 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:42:25 has no hits.
BS10993.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:55:46 Download gff for
BS10993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14869-PB | 1..849 | 17..866 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:22:13 Download gff for
BS10993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14869-PB | 1..849 | 17..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:49:03 Download gff for
BS10993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14869-RB | 898..1754 | 8..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:42:58 Download gff for
BS10993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AdamTS-A-RB | 898..1754 | 8..866 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:42:58 Download gff for
BS10993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15474887..15475296 | 8..418 | 99 | | Minus |
| 3R | 15449239..15449276 | 829..866 | 97 | <- | Minus |
| 3R | 15449337..15449745 | 419..828 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:49:03 Download gff for
BS10993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11274961..11274998 | 829..866 | 97 | <- | Minus |
| arm_3R | 11275059..11275467 | 419..828 | 99 | <- | Minus |
| arm_3R | 11300609..11301018 | 8..418 | 99 | | Minus |
BS10993.complete Sequence
5099 bp assembled on 2009-08-24
GenBank Submission: KX804737
> BS10993.complete
GAAGTTATCAGTCGACATGTCCATGCCGGATGCCGGTTCACTTAAATCGC
CCGCCGGCGGCCAGGAGGTCGAGTGCCATCGCCTGCTGTCGGACCTGCCC
GCCTTCGCGTATCCCAGCACCACACTGCGGTCCACAACTTCTGGTCACAG
CACTGGCACGAATAGTACCACTGTCTGCGAATCTCCCGGTGCTCGGGATC
GTACCTCCTTCGCGTGCTCCTCCTCTTGCGTATCATCCGCCTGCTCAGCC
ACCGCCTCCGATGACGACGAGGATGAGCGTGCCCTTGAGCGCTGTCTGCG
TGGGACGACGGACGACCTTGGGGAGTCCGGCCTGCGGTATTCGCTGAAAG
GACCACCGCCGGAGCTCTACTCGGCCAAGAAGGACTTCATCAGCAAGGGT
CCGCTGCTGGGCAGACAGCTCGAGGTGAAGAAGAGGTGTGAATGGTGGTG
CCACAAGTACATTCAAAAGATGTCCACCCACTGGCGGCAGAATGCCTGCC
TGTATGCCTGCTGCATCGCTTTTCTGCTGGGCATGCTTATCATGTTCCAT
CTCGGTTTGCGAAGTGCCCATAAGGGCCAAGAGGAGCTGCCACAGAGCAC
GCACCCACTAGCCAACAGTCCACCTGCTACACCAGCCACGCTCCATCCCA
GAAGGCTTGATAACGACACGTCGACGGACCACGAGCCACCCGATGGCTTA
GACGATCTGGACGAGGAGGAGCACAGCGCCTTCGTGATGCCCACCAAGGT
CTACAACTACAGTCTCAGCGAAGCTGATCTGATCTACGAGTCGAAACGAA
ACAGCGACATCAACAGTTTCCTAAAAGAGTCCGCATCGGCCTTTGCCATG
ACGGGAACGTATCGCAACATGTCCAATGAGATCTGGGACCCGCATCCGCA
GTACAACCTCAATGTGTTCGGTCGCCAGTTGCATTTGGTGCTGCGACAGG
ACGCCTCGTTCGTCCACAACCATTCGATGACCCACATTCGGATACTGAAG
GAGGGGGAGGAGCATCCGGGACCGGAGACGGAGGCGGAGGCGGAGCAGCG
CCACCTAGGCTGCTTCTACTCCGGTTACGTCGAGGACGATCCGCACTCGA
TGGTCTCCGTCTCACTGTGCGGCGGCATGACTGGTTATATCAAAACGAGT
TTCGGCGCGCTGCTCATTCAGCCGGTGAACCGAACCAGCAGCGATGAGGT
TCTCCACCGGGTCTTTCGCAAATCGCAGCGCAACGCCAGACACGCTGTCT
CCAAGTTCGAGCTGGGCCTGGATGATTTCATGAGCAAGCTGGAGCAGGTG
CAGGAGGAGGAGCAGAAGTCCAAGTCCCGCAAACTGAATCGGAAGAAGCG
ACACTATGCGGACGTGGACAACCAGGTGTACACCTTGGAGGTGCTCATTG
CGGTGGACAATAGCATGAAGCAATTCCACGGCGAGGACCTGCAACCATAC
ATTCTCATCCTCATGTCGATCGTGTCCAGCATTTTTGCGGACGCCAGCAT
TGGTAACTCCATTCGCATTTTGCTGGTGCGACTGATCAGCCTGCCGAATA
TCAACGACCAGACGCATTCCAGCAACGAAATGCTGAAGCACTTCTGCCAG
TTTATTAACCAATCTGGATACGAAAGAGATACAGCCATGTTGATCACACG
CGAACCCATCTGTGGCAGCGTGCCGGGCAAGATTTGCCATATGCTGGGCT
TGGCCGAACTGGGCACTGTTTGCAGTTCCAGTTCCTGCTCCATTGTCCAG
GACACCGGACTGCCCACCGCCTTTACCATGGCCCACGAGCTGGGACACAT
CTTGAACATGAACCACGACGACGACGACAAGTGTATGCCCTATGTCACCA
GGCAGAACAACAACAAGGTGCTCCACATCATGTCCAGCGTGATGGGCATC
CACATGCATCCGTGGTCGTGGTCCAAGTGCTCCCGCCACTTTGTCTCCGA
GTTTCTCGAGAAAACCGACAAGTCCTGTCTGGAGACCTCCGTGGGCGCCC
ACATTCCCTATGGCACCGAGCGTCTGCCTGGAGAGATCTACTCCCTGGAC
GCCCAGTGCCAGCTGAGTTTCGGCAATGACTTTGGCTACTGTCCCACGGA
CGAGGAGTGCAAGCGGTTGTGGTGCAACCGAACCTCCGGTAACTCCAACG
AGCAGTGCGCCTCCAGCAATCTGCCATGGGCCGACGGAACGCCCTGCGGC
TCCAGTGGCCACTGGTGTCAGCGGGGCAAGTGTGTATCCAACAAGCATGG
ATACGGACGCCAGGTGAACGGTGGATGGGGACCATGGACGCCATTCACGC
CCTGCAGCCTCACCTGCGGTGGCGGAGTGCAGGAGTCGCGTCGTGAGTGC
AACCAACCGGTGCCGGAGAACGGTGGCAAGTACTGCACGGGAAGTCGGAA
GAAGTACCGATCGTGCAACACACACCAGTGTCCGCCAGGCAGCATGGATC
CGCGCGAGCAGCAGTGCTATGCGATGAACGGACGGAACATGAACATTCCG
GGCGTGAACCCAGACACCAAGTGGGTGCCCAAATACGAAAAGGATGCGTG
CAAGCTATTCTGCCGCATGGACATGAAGGTCACCTACTTCATGCTCAAGA
GCATGGTCACCGACGGCACCTCCTGTGCGGTGGACAGCTTCGACAAGTGC
GTCAACGGCATCTGCCGGCCGGCGGGATGCGACAACGAGCTCAACTCGAT
TGCCAAGCTGGACAAGTGCGGCGTGTGCGAGGGTCGCAATGACACATGCC
ACGAGGTAACCGGAAATCTGCTCGTCTCCAATCTCCTGGGGCTAAATGAT
GGGAATGAGCCGAACAAGACACTTTACTATGTGACGCGAATACCAAAAGG
TGCCTCCAACATAATAATCACTCAGCGTGGCTATCCCGACCAGAACTTCA
TAGTACTCACCGATGACCGGGACAACGAACTGCTTAATGGAAAATTCCTC
AAGACCTATCCATTGAAATTCGTTTATGCCGGAGTCACGATGCAGTACAC
CGGTTCTAGTAGTGTGGTGGAGCAGGTGAATACGACCTACTCATGGAAAC
TGTCACGTGATCTTATAGTACAGATCATTTCACTGGACGTGAGTCCGTCC
AAGCGGCAGGACACCGTCCTCTTGTCCTACTCCTACACCATCGACAAGCC
ACCGGATTATGAGGCGGAGGTGGAGATCTATCGCTGGGAGATGCAGGCCC
CGAGCAACTGTGATTCCCTATGCGAGGGCAGGAGTCATCGACTGCCGGCC
TGCATCAGCACCACCCAGGGTGTCAAGGTTGCCCCACAGTTCTGTGACAA
GTCCGCCATGCCCAAAATCGATGATCGGGCTTGCAACACTGACTGCCGCC
TCAATCTCACTGTGACGAGCATCTCGGAGTGCTCGGCCGCGTGTGGAGAA
TTGGGTACCCGGGAGAAGACCTACGCCTGCGTCCAGACATTCACGAATAT
GCAACGTTCCAATATTGTGGATATGTCATATTGCAAGCTGAAATTCGATG
TGGCTTACCATGAGGAGTGTCGCGAAGGATGCTGGGTTTTATCGGAGTGG
TCAACTTGCTCCAAGTCGTGTGGCACTGGTTCCCAGCAGCGTGAAGCTCA
CTGCTACCTACACAATTCCCGTGTCAGCGATGATCTGTGCAATCCACGGA
CCAAGCCCCATTTGAACACCCTAATCGGGATCTGCAACACTGAGTCGTGT
CCCACGTACACGAAATCACCTAATGCCCTGGCAGTTAGTAACTGGGTGAT
TGGAGAATGGGGCGAATGCAATGAGTGGTGCGAGAAGACTCGTTCTGTGA
GTTGTTCACATCCATACGGAATCGGCTGCGGCAGTAGAAAGCCCAAGGAC
GTCCGCAAATGCTGCCACATCAAGTACACCAGCGATTGGACAGACTGTTC
GGTGCAATGTGGCGAGGGCGTCAAGAGGAAGAAGCAAAGCTGCACGCGGG
TCTACAAGCCGGATGTTCCGGGTACCCGAAAGCGCCGAGTGTACGTGGAT
GAATCGTACTGCATTAGCCGAAAGGTGCATCGTCCCAAGCTGCGCACCAC
CACCAAATCCTGCAGGATCAACTGCAAGTGGAATGCCTCGGACTGGAGGC
GCTGTCCTGCTGACTGCTCGGAGGAGTACCAAACGCGTGATGTGCGCTGC
GAGTCCTTCCAGGGTGACGGAGTGGAGGACAAGCACTGCGATGCCAAGAA
GCGTCCATCCAAGCGACGCATCTGCAACAACTGCGTGCGCCGGCAGTCGA
GAGTCATCTCGCAGTGCAACTGTGAGGGTGTGGAGAAGAGGCGGGACTTC
TGCTTCAACTCGCACAAGGGTCGCATCGCGTGTCCCACGAGAGCCAGGGT
GGAGCGTCACAGCTGCACTCCGCCGCCACATTGCCGAAGGAGAAGTGCCA
TCGGGAGCAGCATCAGCAGCAGACCGAGGGGCACTGGAGTGAGTAGCAGC
AGGAGCTTGAATTCAATCGGAGGCTCACGGAATCGCGGAACACCGAGAAG
CTGTGCGGACCTGAAGGAGATGCACGGCTACAACAAGGATGGCAACTACC
AGCTGGAGGTGAGATCGCGAATGGTGCACATCTACTGCCACGGGATGAAC
AGCAGGACGCCACAGGAGTACGTGAACGTGGATCCGCAGGAGAACTACTC
CATATACTACGAGTACAGGACGAAACAGACCAACAGCTGTCCGCCGGAGT
CGCGAGGCCACGAGTACTACAACGATCAGAACTCCGGCCGGACGCACTTC
AGAAAGCTGCGGCTGAATATCACCGATCTGCGCATCATGGACAACGACTT
CAAGTTCGCCGATTCGCGAGGATTGGCTCAGAAGCTGGGATCAGCGGGCG
ATTGCTACAATCGCATTGGCCAGTGTCCGCAGGGCGACTTCTCGATTAAC
ATGAAGGACACGGACTTCTCCATACGACCGGGAACCGTGTGGCGGATGCA
TGGCCAGTACTCGGTCATGAAGCGTATCAGTGAGTTTGATACGACCACGC
AGATGCGAAGGGGATTCTGCGGAGGATACTGCGGCGGTTGCTATATAGCG
CCCGATTCTGGCCTTTACCTGGACGTGTTATGAAAGCTTTCTAGACCAT
BS10993.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:29:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AdamTS-A-RB | 5067 | CG14869-PB | 1..5067 | 17..5083 | 25335 | 100 | Plus |
| AdamTS-A-RC | 4758 | CG14869-PC | 92..4758 | 417..5083 | 23335 | 100 | Plus |
| AdamTS-A-RE | 4614 | CG14869-PE | 1..4614 | 470..5083 | 23070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AdamTS-A-RB | 6965 | CG14869-RB | 901..5972 | 12..5083 | 25345 | 100 | Plus |
| AdamTS-A-RC | 6164 | CG14869-RC | 505..5171 | 417..5083 | 23335 | 100 | Plus |
| AdamTS-A-RE | 5932 | CG14869-RE | 273..4939 | 417..5083 | 23335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15443404..15444126 | 4984..4262 | 3615 | 100 | Minus |
| 3R | 32079331 | 3R | 15447224..15447804 | 2540..1960 | 2905 | 100 | Minus |
| 3R | 32079331 | 3R | 15448315..15448836 | 1650..1129 | 2610 | 100 | Minus |
| 3R | 32079331 | 3R | 15449337..15449748 | 827..416 | 2060 | 100 | Minus |
| 3R | 32079331 | 3R | 15474887..15475293 | 418..12 | 2020 | 99.8 | Minus |
| 3R | 32079331 | 3R | 15444185..15444553 | 4264..3896 | 1845 | 100 | Minus |
| 3R | 32079331 | 3R | 15448975..15449278 | 1129..826 | 1520 | 100 | Minus |
| 3R | 32079331 | 3R | 15445340..15445623 | 3354..3071 | 1420 | 100 | Minus |
| 3R | 32079331 | 3R | 15445681..15445906 | 3073..2848 | 1130 | 100 | Minus |
| 3R | 32079331 | 3R | 15445071..15445272 | 3556..3355 | 1010 | 100 | Minus |
| 3R | 32079331 | 3R | 15444612..15444785 | 3895..3722 | 870 | 100 | Minus |
| 3R | 32079331 | 3R | 15446982..15447152 | 2711..2541 | 855 | 100 | Minus |
| 3R | 32079331 | 3R | 15444842..15445006 | 3721..3557 | 825 | 100 | Minus |
| 3R | 32079331 | 3R | 15447869..15448028 | 1960..1801 | 800 | 100 | Minus |
| 3R | 32079331 | 3R | 15448104..15448254 | 1800..1650 | 755 | 100 | Minus |
| 3R | 32079331 | 3R | 15446719..15446859 | 2851..2711 | 705 | 100 | Minus |
| 3R | 32079331 | 3R | 15443239..15443339 | 5083..4983 | 505 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:29:41 has no hits.
BS10993.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:02:06 Download gff for
BS10993.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14869-RB | 906..5971 | 17..5082 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:49:15 Download gff for
BS10993.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14869-RB | 906..5971 | 17..5082 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:55 Download gff for
BS10993.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AdamTS-A-RB | 906..5971 | 17..5082 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:55 Download gff for
BS10993.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15445681..15445904 | 2850..3073 | 100 | <- | Minus |
| 3R | 15446721..15446858 | 2712..2849 | 100 | <- | Minus |
| 3R | 15446982..15447152 | 2541..2711 | 100 | <- | Minus |
| 3R | 15443240..15443337 | 4985..5082 | 100 | <- | Minus |
| 3R | 15443404..15444123 | 4265..4984 | 100 | <- | Minus |
| 3R | 15444185..15444553 | 3896..4264 | 100 | <- | Minus |
| 3R | 15444612..15444785 | 3722..3895 | 100 | <- | Minus |
| 3R | 15444842..15445006 | 3557..3721 | 100 | <- | Minus |
| 3R | 15445071..15445272 | 3355..3556 | 100 | <- | Minus |
| 3R | 15445340..15445620 | 3074..3354 | 100 | <- | Minus |
| 3R | 15447224..15447804 | 1960..2540 | 100 | <- | Minus |
| 3R | 15447870..15448028 | 1801..1959 | 100 | <- | Minus |
| 3R | 15448104..15448253 | 1651..1800 | 100 | <- | Minus |
| 3R | 15448315..15448835 | 1130..1650 | 100 | <- | Minus |
| 3R | 15448975..15449276 | 828..1129 | 100 | <- | Minus |
| 3R | 15449337..15449745 | 419..827 | 100 | <- | Minus |
| 3R | 15474887..15475288 | 17..418 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:49:15 Download gff for
BS10993.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11272704..11272874 | 2541..2711 | 100 | <- | Minus |
| arm_3R | 11268962..11269059 | 4985..5082 | 100 | <- | Minus |
| arm_3R | 11269126..11269845 | 4265..4984 | 100 | <- | Minus |
| arm_3R | 11269907..11270275 | 3896..4264 | 100 | <- | Minus |
| arm_3R | 11270334..11270507 | 3722..3895 | 100 | <- | Minus |
| arm_3R | 11270564..11270728 | 3557..3721 | 100 | <- | Minus |
| arm_3R | 11270793..11270994 | 3355..3556 | 100 | <- | Minus |
| arm_3R | 11271062..11271342 | 3074..3354 | 100 | <- | Minus |
| arm_3R | 11271403..11271626 | 2850..3073 | 100 | <- | Minus |
| arm_3R | 11272443..11272580 | 2712..2849 | 100 | <- | Minus |
| arm_3R | 11272946..11273526 | 1960..2540 | 100 | <- | Minus |
| arm_3R | 11273592..11273750 | 1801..1959 | 100 | <- | Minus |
| arm_3R | 11273826..11273975 | 1651..1800 | 100 | <- | Minus |
| arm_3R | 11274037..11274557 | 1130..1650 | 100 | <- | Minus |
| arm_3R | 11274697..11274998 | 828..1129 | 100 | <- | Minus |
| arm_3R | 11275059..11275467 | 419..827 | 100 | <- | Minus |
| arm_3R | 11300609..11301010 | 17..418 | 100 | | Minus |
BS10993.pep Sequence
Translation from 16 to 5082
> BS10993.pep
MSMPDAGSLKSPAGGQEVECHRLLSDLPAFAYPSTTLRSTTSGHSTGTNS
TTVCESPGARDRTSFACSSSCVSSACSATASDDDEDERALERCLRGTTDD
LGESGLRYSLKGPPPELYSAKKDFISKGPLLGRQLEVKKRCEWWCHKYIQ
KMSTHWRQNACLYACCIAFLLGMLIMFHLGLRSAHKGQEELPQSTHPLAN
SPPATPATLHPRRLDNDTSTDHEPPDGLDDLDEEEHSAFVMPTKVYNYSL
SEADLIYESKRNSDINSFLKESASAFAMTGTYRNMSNEIWDPHPQYNLNV
FGRQLHLVLRQDASFVHNHSMTHIRILKEGEEHPGPETEAEAEQRHLGCF
YSGYVEDDPHSMVSVSLCGGMTGYIKTSFGALLIQPVNRTSSDEVLHRVF
RKSQRNARHAVSKFELGLDDFMSKLEQVQEEEQKSKSRKLNRKKRHYADV
DNQVYTLEVLIAVDNSMKQFHGEDLQPYILILMSIVSSIFADASIGNSIR
ILLVRLISLPNINDQTHSSNEMLKHFCQFINQSGYERDTAMLITREPICG
SVPGKICHMLGLAELGTVCSSSSCSIVQDTGLPTAFTMAHELGHILNMNH
DDDDKCMPYVTRQNNNKVLHIMSSVMGIHMHPWSWSKCSRHFVSEFLEKT
DKSCLETSVGAHIPYGTERLPGEIYSLDAQCQLSFGNDFGYCPTDEECKR
LWCNRTSGNSNEQCASSNLPWADGTPCGSSGHWCQRGKCVSNKHGYGRQV
NGGWGPWTPFTPCSLTCGGGVQESRRECNQPVPENGGKYCTGSRKKYRSC
NTHQCPPGSMDPREQQCYAMNGRNMNIPGVNPDTKWVPKYEKDACKLFCR
MDMKVTYFMLKSMVTDGTSCAVDSFDKCVNGICRPAGCDNELNSIAKLDK
CGVCEGRNDTCHEVTGNLLVSNLLGLNDGNEPNKTLYYVTRIPKGASNII
ITQRGYPDQNFIVLTDDRDNELLNGKFLKTYPLKFVYAGVTMQYTGSSSV
VEQVNTTYSWKLSRDLIVQIISLDVSPSKRQDTVLLSYSYTIDKPPDYEA
EVEIYRWEMQAPSNCDSLCEGRSHRLPACISTTQGVKVAPQFCDKSAMPK
IDDRACNTDCRLNLTVTSISECSAACGELGTREKTYACVQTFTNMQRSNI
VDMSYCKLKFDVAYHEECREGCWVLSEWSTCSKSCGTGSQQREAHCYLHN
SRVSDDLCNPRTKPHLNTLIGICNTESCPTYTKSPNALAVSNWVIGEWGE
CNEWCEKTRSVSCSHPYGIGCGSRKPKDVRKCCHIKYTSDWTDCSVQCGE
GVKRKKQSCTRVYKPDVPGTRKRRVYVDESYCISRKVHRPKLRTTTKSCR
INCKWNASDWRRCPADCSEEYQTRDVRCESFQGDGVEDKHCDAKKRPSKR
RICNNCVRRQSRVISQCNCEGVEKRRDFCFNSHKGRIACPTRARVERHSC
TPPPHCRRRSAIGSSISSRPRGTGVSSSRSLNSIGGSRNRGTPRSCADLK
EMHGYNKDGNYQLEVRSRMVHIYCHGMNSRTPQEYVNVDPQENYSIYYEY
RTKQTNSCPPESRGHEYYNDQNSGRTHFRKLRLNITDLRIMDNDFKFADS
RGLAQKLGSAGDCYNRIGQCPQGDFSINMKDTDFSIRPGTVWRMHGQYSV
MKRISEFDTTTQMRRGFCGGYCGGCYIAPDSGLYLDVL*
BS10993.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:40:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AdamTS-A-PB | 1688 | CG14869-PB | 1..1688 | 1..1688 | 9255 | 100 | Plus |
| AdamTS-A-PC | 1585 | CG14869-PC | 31..1585 | 134..1688 | 8556 | 99.9 | Plus |
| AdamTS-A-PE | 1537 | CG14869-PE | 1..1537 | 152..1688 | 8448 | 100 | Plus |
| CG4096-PB | 1023 | CG4096-PB | 93..921 | 305..1079 | 836 | 30.1 | Plus |
| CG4096-PC | 769 | CG4096-PC | 93..741 | 305..884 | 729 | 31.4 | Plus |
