Clone Sequence Records
BS11013.complete Sequence
3536 bp assembled on 2009-12-07
GenBank Submission: KX803371
> BS11013.complete
GAAGTTATCAGTCGACATGAACTCAAACTCCTGCAGTGACAGCAGTAACG
AGTCCATGGTCAATCCACCGCACATACAGATGAACTTTGGCCAGCAGGCG
CAGCAGCAGCAATCGCATCAGCACCAGCAGCAGCAGCAGCAGCAGGAACG
TTATGTGTGGGAGATGCGAACCCGTAGCCCAAATGTGACGCCAGCCAGCA
CGGTGCTCAATTCGCCGGATCTCAATGGCGAGCTGTCCTACGTTCCGCTG
CAGGGTCTTTCGCCATCGGGCGGAGGTGTTCAGGGATCCGGCAGCTATGG
TTCGAATGCGGGACGCGATTCTGGCAGCTATTACTACCAGCGACCGCAGT
TGCATCAAATCCGACTGGGTAGGAGTCCGGGCAGCCAGTTTGAGACACGG
GATGTCCTGCCACAGGGATTGGCCAGCCCCGGCTCACCAACGGATGTGGG
CAAGGCGGACGGTCAGTGCCTGCGTGATGGTGAGATCGTGGTGTTCGACG
ACATTGACACAAACTGGATGAACAAGGCATCGAGTGGCCAGCGTCCAGGC
AGCAATGAGGATGTCCTCAAGGTGACCAAAATGATTGGACAGCTGCCAAT
AGCCGAGTACGAGGGTTCACCGCGACGATTTGGAAGTCAACCGAATACAA
ATACCATTACCATGGGTGGTCCTAGAAAACGTCCGCCGGGTTTCCCGCAA
AGAGTTTCGCCCACCACCAGTGTCGCTAATAATGCAACTGCTGCAGCTAA
AGCATCCGTGGGCAACCTTATCGATTTGGTCGACCACGAGGAAGAGCGTT
CCGGGACGCTTCGCGAGAAAACACCTACTTTCGACTACCTGTACGAATTC
TCAGAGACCAGAAAGGTGCTGGAGGAGTTCTTCAAGGCGAATCCGGAGGA
CGAAAAGCGGTACACGGATTACACCACGGAAAGTGGAGACGATGTCGCTA
GCTCGCCACAAGAGTACCCAGCCACGCCCATGGAGCAGGCATATATAGGA
CAGCGGTTGGCGAGAATACCTAAAGATGAGCTCTACATGGTTCACCGGTC
GCCTACTAAAAAGCCACCCAGTGACCAGAATCCATCGACGGCCTACCAGG
AGCATAATGATATTGAGCTGTACATTGATTCGAATAGCCGAAGCAGCGGC
GATTTGGCGGACACCGAACTGGAGGCAAATCTGCGCCGACACTCCCGAAA
CTTTACCCTGTCTCCCGAGACGACGGATTACGATTCGAATTGCGGTGATT
TGGACAGTCTGTCTAACGACATTAACTGCCCCACGGATTTTGGTAAACTG
TATACGAGCATGCCTGTCCTAGAAGATGGCCTGAGCAGTGGCCACGCCTC
CGACACGGAGAACAACGTATCCGTGGTGTGTGACAAGCAGCAATCGTCCC
AATCTCAGCCCGTCCACGAGCACAACGGTAATGGCGAGCGGCTGGAGAAC
GACTACAATGTGATGAGCGCCAGCTTGGCCACATTGACCACAGATGCCTC
GCAATCGGCGCTGATAAGCGACTTCGCCTCACTGCCCATGCCCCCGGCTC
CGCCTCCATCATCGCCGCCCCAAATCGAGATCGCCGATGCAAGTGAATCC
ATGACCATGGTCCCAGATGCTGATAATCCACTGGACAGTCACTACGGTGC
GGTTTATGCAGCAGCTTTGGGAGGTACTCACACAGAGAAGTCAGCGGGAT
CAGGACTGGGGGTGACACCAGTAACTGCGGGAGGATCTTTGCCATCGCAG
GCTGCTTCGGAAATCCAGGAGGCCATGAAGGAGATACGTTCCGCCTTGCA
GCGTGCTAAAACGCAGCCTGAAAAACTAAAATTCTGTGACGAAGTGCTGC
CCACGGATCCAGATTCACCGGTTTGGGTTCCACGCAAAGGGACGACGATC
TCGACGGCCCAAGGTGCGGCGGCGGATGAGGAACCAGACACCGACCTTGA
AACAGATCGTCTATTGGGTCAGCAGAGGCACGATGAGCAGGATTTCTTCG
CCGATCAGAGCCTGGCTGATAACAATGCCAATGAGGGCACGGATATTGCC
AGCAATGGGCATCTAAATGGCACGTCGGACAACAACAATCCGAATCCTAT
GAATAATAGCAAGCCGCAAACCTACTCGACGGCCACCATTCGACAAGGCA
TCGGCACCTCGTTGACACCCAATTCGCCGGACATCTGTCAGATTGTGGGC
ACGACCGACATCTCCATAAGCTCGCCGGAAAAACTGCAGTTCACCAAAAG
TCCCACGGGCTCTATTAAATCCCTGAAGGACTCTGCCAACTCGGACAAGA
AGGCCAAATCGCGGAACAAAGAGGGTCTCTTGGAACCCAAAGTTCTCATT
GAGGGCGTGTTGTTTCGGGCCAGATACCTTGGATCCACTCAACTTGTCTG
CGAGGGTCAGCCGACCAAGTCGACCAGAATGATGCAGGCCGAGGAGGCCG
TTTCCAGGATCAAGGCTCCCGAGGGCGAAAGTCAGCCGAGCACTGAAGTG
GACCTGTTCATATCAACCGAAAAGATAATGGTGCTTAACACGGATCTCAA
GGAGATCATGATGGACCATGCGCTGCGTACTATATCCTATATAGCTGACA
TTGGCGATCTGGTTGTGCTGATGGCTCGTCGTCGATTCGTACCGAATAGT
GTTGTGGATCCATCGATCACCAGTCCATTAGGTGATGTTCCCACTCCGGG
CATAGGCGAGGAGGAGTCGCCCCCCAAAGAGCCACTCAGCAAGCACAATC
GCACGCCCAAAATGATCTGCCACGTGTTCGAAAGCGATGAGGCGCAGTTC
ATAGCTCAGTCCATTGGACAGGCCTTCCAGGTGGCCTACATGGAGTTCCT
GAAGGCGAACGGCATCGAAAACGAGAGTCTGGCCAAAGAGATGGACTACC
AGGAGGTGCTCAACAGTCAGGAGATTTTCGGTGATGAGCTGGAGATCTTT
GCCAAAAAGGAGCTGCAAAAGGAGGTAGTTGTGCCGAAGGCGAAAGGCGA
GATCCTAGGCGTGGTGATCGTAGAGAGTGGCTGGGGATCCATGCTGCCCA
CCGTGGTGATTGCCAACCTGATGAGTTCAGGAGCAGCTGCCCGCTGCGGC
CAGCTGAACATCGGTGACCAGCTGATCGCCATTAACGGCATGAGCCTGGT
GGGACTGCCGCTGTCCACCTGCCAGAGCTACATACGCAATGCCAAGAACC
AAACTGCCGTCAAGTTCACCGTTGTGCCCTGTCCGCCTGTCGTCGAGGTT
AAGATCCTGCGTCCCAAGGCGCTGTTCCAGTTGGGTTTTAGTGTTCAAAA
TGGCGTGATCTGCAGTCTTTTGCGTGGAGGAATCGCTGAGCGGGGTGGAG
TACGCGTAGGCCACCGCATCATTGAGATTAACAACCAGAGCGTTGTGGCC
GTGCCACACGATACCATTGTCAAGCTGTTGTCATCCTCAGTGGGCGAGAT
CCTGATGAAGACAATGCCCACGTCCATGTTTCGTTTGCTCACCGGTCAAG
AGACGCCAATCTATATATAAAAGCTTTCTAGACCAT
BS11013.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:25:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X11L-RA | 3504 | CG5675-PA | 1..3504 | 17..3520 | 17520 | 100 | Plus |
X11L-RB | 3507 | CG5675-PB | 1..3507 | 17..3520 | 17455 | 99.9 | Plus |
X11L-RC | 3507 | CG5675-PC | 1..3507 | 17..3520 | 17455 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:25:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X11L-RA | 4500 | CG5675-RA | 205..3710 | 16..3521 | 17530 | 100 | Plus |
X11L-RB | 5282 | CG5675-RB | 205..3713 | 16..3521 | 17465 | 99.9 | Plus |
X11L-RC | 4862 | CG5675-RC | 564..4072 | 16..3521 | 17465 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:25:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17602152..17603093 | 1067..2008 | 4710 | 100 | Plus |
X | 23542271 | X | 17601378..17601919 | 414..955 | 2710 | 100 | Plus |
X | 23542271 | X | 17604491..17604971 | 2827..3307 | 2405 | 100 | Plus |
X | 23542271 | X | 17600905..17601305 | 16..416 | 2005 | 100 | Plus |
X | 23542271 | X | 17604069..17604438 | 2463..2832 | 1850 | 100 | Plus |
X | 23542271 | X | 17603153..17603473 | 2006..2326 | 1605 | 100 | Plus |
X | 23542271 | X | 10708274..10708783 | 2747..3256 | 1320 | 83.9 | Plus |
X | 23542271 | X | 17603695..17603836 | 2324..2465 | 710 | 100 | Plus |
X | 23542271 | X | 17605041..17605182 | 3307..3448 | 710 | 100 | Plus |
X | 23542271 | X | 17601984..17602095 | 955..1066 | 560 | 100 | Plus |
X | 23542271 | X | 10708065..10708242 | 2463..2640 | 395 | 81.5 | Plus |
X | 23542271 | X | 17605236..17605310 | 3447..3521 | 375 | 100 | Plus |
X | 23542271 | X | 10708895..10708999 | 3307..3411 | 255 | 82.9 | Plus |
X | 23542271 | X | 10706959..10707083 | 2341..2465 | 235 | 79.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:25:22 has no hits.
BS11013.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:49 Download gff for
BS11013.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X11L-RA | 188..3689 | 17..3518 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:52 Download gff for
BS11013.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X11L-RA | 206..3707 | 17..3518 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:00:55 Download gff for
BS11013.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X11L-RA | 188..3689 | 17..3518 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:03 Download gff for
BS11013.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X11L-RA | 206..3707 | 17..3518 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:03 Download gff for
BS11013.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17605042..17605182 | 3308..3448 | 100 | -> | Plus |
X | 17605238..17605307 | 3449..3518 | 100 | | Plus |
X | 17600906..17601304 | 17..415 | 100 | -> | Plus |
X | 17601380..17601919 | 416..955 | 100 | -> | Plus |
X | 17601985..17602095 | 956..1066 | 100 | -> | Plus |
X | 17602152..17603093 | 1067..2008 | 100 | -> | Plus |
X | 17603156..17603471 | 2009..2324 | 100 | -> | Plus |
X | 17603696..17603835 | 2325..2464 | 100 | -> | Plus |
X | 17604071..17604436 | 2465..2830 | 100 | -> | Plus |
X | 17604495..17604971 | 2831..3307 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:52 Download gff for
BS11013.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17494939..17495337 | 17..415 | 100 | -> | Plus |
arm_X | 17495413..17495952 | 416..955 | 100 | -> | Plus |
arm_X | 17496018..17496128 | 956..1066 | 100 | -> | Plus |
arm_X | 17496185..17497126 | 1067..2008 | 100 | -> | Plus |
arm_X | 17497189..17497504 | 2009..2324 | 100 | -> | Plus |
arm_X | 17497729..17497868 | 2325..2464 | 100 | -> | Plus |
arm_X | 17498104..17498469 | 2465..2830 | 100 | -> | Plus |
arm_X | 17498528..17499004 | 2831..3307 | 100 | -> | Plus |
arm_X | 17499075..17499215 | 3308..3448 | 100 | -> | Plus |
arm_X | 17499271..17499340 | 3449..3518 | 100 | | Plus |
BS11013.3prime Sequence
897 bp (807 high quality bases) assembled on 2006-04-19
> BS11013.3prime
ATGGTCTAGAAAGCTTTTATATATAGATTGGCGTCTCTTGACCGGTGAGC
AAACGAAACATGGACGTGGGCATTGTCTTCATCAGGATCTCGCCCACTGA
GGATGACAACAGCTTGACAATGGTATCGTGTGGCACGGCCACAACGCTCT
GGTTGTTAATCTCAATGATGCGGTGGCCTACGCGTACTCCACCCCGCTCA
GCGATTCCTCCACGCAAAAGACTGCAGATCACGCCATTTTGAACACTAAA
ACCCAACTGGAACAGCGCCTTGGGACGCAGGATCTTAACCTCGACGACAG
GCGGACAGGGCACAACGGTGAACTTGACGGCAGTTTGGTTCTTGGCATTG
CGTATGTAGCTCTGGCAGGTGGACAGCGGCAGTCCCACCAGGCTCATGCC
GTTAATGGCGATCAGCTGGTCACCGATGTTCAGCTGGCCGCAGCGGGCAG
CTGCTCCTGAACTCATCAGGTTGGCAATCACCACGGTGGGCAGCATGGAT
CCCCAGCCACTCTCTACGATCACCACGCCTAGGATCTCGCCTTTCGCCTT
CGGCACAACTACCTCCTTTTGCAGCTCCTTTTTGGCAAAGATCTCCAGCT
CATCACCGAAAATCTCCTGACTGTTGAGCACCTCCTGGTAGTCCATCTCT
TTGGCCAGACTCTCGTTTTCGATGCCGTTCGCCTTCAGGAACTCCATGTA
GGCCACCTGGAAGGCCTGTCCAATGGACTGAGCTATGAACTGCGCCTCAT
CGCTTTCGAACACGTGGCAGATCATTTTGGGCGTGCGATTGTGCTTGCTG
AGTGGCTCTTTGGGGGGCGACTCCTCCTCGCCTATGCCCGGAGTGGGAAC
ATCACCTAATGGACTGGTGATCGATGGATCCACAACACTATTCGGTA
BS11013.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:00:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5675-PA | 3504 | X11L-RA | 2624..3504 | 897..17 | 4405 | 100 | Minus |
CG32677-PA | 5439 | CG32677-RA | 4807..4895 | 649..561 | 270 | 92.1 | Minus |
CG32677-PA | 5439 | CG32677-RA | 4915..5051 | 541..405 | 210 | 86.1 | Minus |
CG32677-PA | 5439 | CG32677-RA | 4666..4715 | 790..741 | 200 | 96 | Minus |
CG32677-PA | 5439 | CG32677-RA | 4732..4784 | 724..672 | 165 | 92.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:46:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X11L-RF | 5288 | CG5675-RF | 2838..3719 | 897..16 | 4410 | 100 | Minus |
X11L-RE | 4485 | CG5675-RE | 2814..3695 | 897..16 | 4410 | 100 | Minus |
X11L-RB | 5282 | CG5675-RB | 2832..3713 | 897..16 | 4410 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:46:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17604491..17604971 | 710..230 | 2405 | 100 | Minus |
X | 23542271 | X | 10708274..10708783 | 790..281 | 1320 | 83.9 | Minus |
X | 23542271 | X | 17604246..17604438 | 897..705 | 965 | 100 | Minus |
X | 23542271 | X | 17605041..17605182 | 230..89 | 710 | 100 | Minus |
X | 23542271 | X | 17605236..17605310 | 90..16 | 375 | 100 | Minus |
X | 23542271 | X | 10708895..10708999 | 230..126 | 255 | 82.9 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:46:46 has no hits.
BS11013.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:56:05 Download gff for
BS11013.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X11L-PA | 2625..3504 | 17..896 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:22:37 Download gff for
BS11013.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5675-PA | 2625..3504 | 17..896 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 12:52:19 Download gff for
BS11013.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X11L-RB | 2833..3713 | 16..896 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:58:11 Download gff for
BS11013.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X11L-RB | 2833..3713 | 16..896 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:58:11 Download gff for
BS11013.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17604247..17604436 | 707..896 | 100 | -> | Minus |
X | 17604495..17604971 | 230..706 | 100 | -> | Minus |
X | 17605042..17605182 | 89..229 | 100 | -> | Minus |
X | 17605238..17605310 | 16..88 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 12:52:19 Download gff for
BS11013.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17498280..17498469 | 707..896 | 100 | -> | Minus |
arm_X | 17498528..17499004 | 230..706 | 100 | -> | Minus |
arm_X | 17499075..17499215 | 89..229 | 100 | -> | Minus |
arm_X | 17499271..17499343 | 16..88 | 100 | | Minus |
BS11013.5prime Sequence
917 bp (779 high quality bases) assembled on 2006-04-19
> BS11013.5prime
GAAGTTATCAGTCGACATGAACTCAAACTCCTGCAGTGACAGCAGTAACG
AGTCCATGGTCAATCCACCGCACATACAGATGAACTTTGGCCAGCAGGCG
CAGCAGCAGCAATCGCATCAGCACCAGCAGCAGCAGCAGCAGCAGGAACG
TTATGTGTGGGAGATGCGAACCCGTAGCCCAAATGTGACGCCAGCCAGCA
CGGTGCTCAATTCGCCGGATCTCAATGGCGAGCTGTCCTACGTTCCGCTG
CAGGGTCTTTCGCCATCGGGCGGAGGTGTTCAGGGATCCGGCAGCTATGG
TTCGAATGCGGGACGCGATTCTGGCAGCTATTACTACCAGCGACCGCAGT
TGCATCAAATCCGACTGGGTAGGAGTCCGGGCAGCCAGTTTGAGACACGG
GATGTCCTGCCACAGGGATTGGCCAGCCCCGGCTCACCAACGGATGTGGG
CAAGGCGGACGGTCAGTGCCTGCGTGATGGTGAGATCGTGGTGTTCGACG
ACATTGACACAAACTGGATGAACAAGGCATCGAGTGGCCAGCGTCCAGGC
AGCAATGAGGATGTCCTCAAGGTGACCAAAATGATTGGACAGCTGCCAAT
AGCCGAGTACGAGGGTTCACCGCGACGATTTGGAAGTCAACCGAATACAA
ATACCATTACCATGGGTGGTCCTAGAAAACGTCCGCCGGGTTTCCCGCAN
AGAGTTTCGCCCACCACCAGTGTCGCTAATAATGCAACTGCTGCAGCTAA
AGCATCCGTGGGCAACCTTATCGATTTGGTCGACCACGAGGAAGAGCGTT
CCGGGACGCTTCGCGAGAAAACACCTACTTTCGACTACCTGTACGAATTC
TCAGAGACCAGAAAGGTGCTGGAGGAGTTCTTCAAGGCGAATCCCGAGGA
CGAAAAGCGGTACACGG
BS11013.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:00:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5675-PA | 3504 | X11L-RA | 1..901 | 17..917 | 4461 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:33:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X11L-RF | 5288 | CG5675-RF | 205..1106 | 16..917 | 4484 | 99.8 | Plus |
X11L-RE | 4485 | CG5675-RE | 205..1106 | 16..917 | 4484 | 99.8 | Plus |
X11L-RB | 5282 | CG5675-RB | 205..1106 | 16..917 | 4484 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:33:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17601378..17601881 | 414..917 | 2494 | 99.6 | Plus |
X | 23542271 | X | 17600905..17601305 | 16..416 | 2005 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:33:07 has no hits.
BS11013.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:56:06 Download gff for
BS11013.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X11L-PA | 1..901 | 17..917 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:22:39 Download gff for
BS11013.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5675-PA | 1..901 | 17..917 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 03:06:49 Download gff for
BS11013.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X11L-RB | 201..1106 | 9..917 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:32:42 Download gff for
BS11013.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X11L-RB | 201..1106 | 9..917 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:32:42 Download gff for
BS11013.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17600901..17601304 | 9..415 | 99 | -> | Plus |
X | 17601380..17601881 | 416..917 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 03:06:49 Download gff for
BS11013.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17494934..17495337 | 9..415 | 99 | -> | Plus |
arm_X | 17495413..17495914 | 416..917 | 99 | | Plus |
BS11013.pep Sequence
Translation from 16 to 3519
> BS11013.pep
MNSNSCSDSSNESMVNPPHIQMNFGQQAQQQQSHQHQQQQQQQERYVWEM
RTRSPNVTPASTVLNSPDLNGELSYVPLQGLSPSGGGVQGSGSYGSNAGR
DSGSYYYQRPQLHQIRLGRSPGSQFETRDVLPQGLASPGSPTDVGKADGQ
CLRDGEIVVFDDIDTNWMNKASSGQRPGSNEDVLKVTKMIGQLPIAEYEG
SPRRFGSQPNTNTITMGGPRKRPPGFPQRVSPTTSVANNATAAAKASVGN
LIDLVDHEEERSGTLREKTPTFDYLYEFSETRKVLEEFFKANPEDEKRYT
DYTTESGDDVASSPQEYPATPMEQAYIGQRLARIPKDELYMVHRSPTKKP
PSDQNPSTAYQEHNDIELYIDSNSRSSGDLADTELEANLRRHSRNFTLSP
ETTDYDSNCGDLDSLSNDINCPTDFGKLYTSMPVLEDGLSSGHASDTENN
VSVVCDKQQSSQSQPVHEHNGNGERLENDYNVMSASLATLTTDASQSALI
SDFASLPMPPAPPPSSPPQIEIADASESMTMVPDADNPLDSHYGAVYAAA
LGGTHTEKSAGSGLGVTPVTAGGSLPSQAASEIQEAMKEIRSALQRAKTQ
PEKLKFCDEVLPTDPDSPVWVPRKGTTISTAQGAAADEEPDTDLETDRLL
GQQRHDEQDFFADQSLADNNANEGTDIASNGHLNGTSDNNNPNPMNNSKP
QTYSTATIRQGIGTSLTPNSPDICQIVGTTDISISSPEKLQFTKSPTGSI
KSLKDSANSDKKAKSRNKEGLLEPKVLIEGVLFRARYLGSTQLVCEGQPT
KSTRMMQAEEAVSRIKAPEGESQPSTEVDLFISTEKIMVLNTDLKEIMMD
HALRTISYIADIGDLVVLMARRRFVPNSVVDPSITSPLGDVPTPGIGEEE
SPPKEPLSKHNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGI
ENESLAKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVV
IVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGMSLVGLPLS
TCQSYIRNAKNQTAVKFTVVPCPPVVEVKILRPKALFQLGFSVQNGVICS
LLRGGIAERGGVRVGHRIIEINNQSVVAVPHDTIVKLLSSSVGEILMKTM
PTSMFRLLTGQETPIYI*
BS11013.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:32:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X11L-PA | 1167 | CG5675-PA | 1..1167 | 1..1167 | 6021 | 100 | Plus |
X11L-PB | 1168 | CG5675-PB | 1..1168 | 1..1167 | 6009 | 99.9 | Plus |
X11L-PC | 1168 | CG5675-PC | 1..1168 | 1..1167 | 6009 | 99.9 | Plus |
X11L-PF | 1170 | CG5675-PF | 1..1170 | 1..1167 | 5996 | 99.7 | Plus |
X11L-PE | 1162 | CG5675-PE | 1..1162 | 1..1167 | 5961 | 99.4 | Plus |