Clone Sequence Records
BS11015.complete Sequence
3575 bp assembled on 2009-12-07
GenBank Submission: KX805057
> BS11015.complete
GAAGTTATCAGTCGACATGAGCGTGGACACGTACGCGCCCAGCTCGGCGC
TCTCGTTCCTGGACATGGACGACAACGAGCTGCTTCCGGGAGCGGATACT
CAACCCACGCAGTACGATTACCGCGACTTTACCATGCCCTCCACCTCGCA
GAGCCAGACCCAGAACGATCAGCTGGAGATTGCCCAACGCTGCTCTGCCG
GAGACTCGCATCCACGACTGGCCAGCATCACCAACGATCTGGCCGATCTG
CAGTTCGAAGAGGAGGACGACGAGCCTGGCAGCTCGTATGTGAAGGAGCT
GCCGCCGCATGCGTGCAAGTATTGCGGCATCCATGATCCAGCCACGGTGG
TCATGTGCAACAACTGCCGCAAATGGTTTTGCAACGGTCGTGGAAGCACT
TCCGGTTCGCACATCATCAACCATCTGGTGAGGGCCAAGCATCGCGAGGT
GACGCTCCACGGGGAAGGTCCCCTGGGCGAGACAATCCTGGAGTGCTACT
CCTGTGGTGTGCGCAACGTCTTTGTGCTGGGCTTCATTCCGGCCAAGGCC
GATTCTGTGGTCGTGCTGCTCTGCCGTCAGCCGTGTGCCGCCCAGAATTC
GCTAAAGGATATGAACTGGGACCAGGAACAGTGGAAGCCTCTAATTGCAG
ACCGCTGCTTTTTGGCCTGGCTGGTAAAGCAACCCAGCGAACAGGGACAG
CTGCGAGCTCGCCAAATCTCAGCCGCTCAGATCAACAAGCTGGAGGAGCT
ATGGAAGGAGAATATTGAGGCCACGTTTCAGGATCTGGAGAAGCCAGGCA
TTGACTCGGAGCCAGCACATGTGCTACTCCGCTACGAGGATGGCTATCAG
TACGAGAAGACCTTTGGGCCGCTGGTCCGCCTTGAGGCCGAATACGACCA
AAAACTGAAGGAGTCTGCCACGCAGGAGAACATCGAAGTACGCTGGGACG
TCGGCCTCAACAAAAAGACCATTGCCTACTTTACGCTGGCGAAGACCGAT
TCGGACATGAAGCTCATGCATGGCGACGAGCTGCGCCTGCATTATGTGGG
CGAGCTGTACAATCCGTGGAGCGAGATCGGCCACGTTATCAAGGTGCCGG
ACAATTTCGGCGATGACGTCGGCCTGGAGCTGAAATCCTCAACGAATGCC
CCGGTTAAGTGCACCAGTAACTTTACGGTGGACTTCATCTGGAAGTGCAC
GTCATTTGATCGCATGACACGTGCTCTGTGCAAATTCGCCATCGATCGCA
ATTCAGTGTCGAACTTCATCTACTCGCGCCTGTTGGGCCACGGTCGTGCG
GATTCCAACGACGAGGTGCTGTTCCGCGGCCCACAACCCAAGCTCTTCAG
TGCCCCGCATCTGCCGGATTTGAATCGCAGCCAGGTGTATGCCGTGAAAC
ACGCGCTTCAGCGTCCGCTCTCGCTAATCCAAGGGCCGCCTGGCACGGGC
AAAACCGTGACCTCGGCGACCATCGTTTACCAGCTGGTCAAGCTCCATGG
TGGCACAGTGCTGGTGTGCGCTCCCAGCAACACGGCCGTGGATCAGCTAA
CTGAGAAGATCCACCGAACAAACCTTAAAGTGGTGCGTGTTTGCGCCAAG
AGCCGTGAGGCCATCGATAGCCCGGTAAGCTTCCTGGCGCTGCACAACCA
AATCCGTAACATGGAGACCAACTCGGAGCTAAAGAAGCTGCAGCAGCTGA
AAGACGAGACCGGCGAGCTGAGCTCAGCAGACGAAAAGCGATACCGCAAC
CTGAAACGTGCCGCCGAGAACCAACTGCTGGAGGCTGCCGACGTTATCTG
CTGCACATGCGTAGGCGCCGGCGATGGTCGTCTATCGCGAGTCAAGTTCA
CCTCGATCCTGATCGATGAGTCTATGCAGTCGACGGAGCCGGAGTGCATG
GTGCCAGTGGTGCTGGGCGCTAAGCAGCTGATCCTCGTGGGCGATCACTG
CCAGCTGGGACCGGTTGTTATGTGCAAGAAAGCAGCTCGTGCCGGCCTCT
CGCAAAGTTTGTTCGAGCGCCTGGTGGTTCTGGGCATCCGTCCGTTCCGG
CTGGAGGTGCAATATCGCATGCACCCCGAGCTGTCCCAGTTCCCGTCCAA
CTTCTTCTACGAGGGATCGCTGCAAAACGGCGTCTGCGCGGAGGATCGTC
GCCTTAAGCTTGATTTCCCCTGGCCACAGCCGGAGAGACCGATGTTCTTT
CTGGTAACACAGGGACAGGAGGAGATTGCCGGCTCCGGCACCTCTTTCCT
CAACCGCACAGAGGCGGCCAACGTGGAAAAGATTACGACGCGATTCCTTA
AGGCAGGCATCAAGCCGGAACAAATTGGAATCATCACGCCTTACGAAGGT
CAGCGCGCTTACCTGGTGCAGTACATGCAATACCAGGGCAGCCTGCACTC
TCGTCTATACCAGGAGATCGAGATCGCCAGTGTGGACGCGTTCCAGGGAC
GTGAGAAGGACATCATTATCATGTCTTGCGTGCGATCTAACGAACGTCAA
GGCATCGGCTTTTTGAACGACCCACGTCGCCTTAATGTTGCCCTTACACG
GGCCAAGTTCGGGATCATCATTGTGGGCAATCCCAAAGTGCTCGCCAAGC
AGCAGCTGTGGAACCATCTGCTCAACTTCTACAAGGACCGTAAGGTGCTC
GTCGAGGGATCTCTGAATAACCTTAAGGAGTCGCTAATCCACTTCCAGAA
GCCCAAAAAGCTTGTCAACAGCATGAACATTGGGGCACACTTTATGTCCA
CCATTATTGCCGATGCCAAGGAAGTGATGGTGCCAGGCTCCATTTACGAC
CGCAGTGGCGGTTACGGCCAAGGTCGCCAAATGGTGGGACAGTCAATGAA
TGGCGGACAGTACGGTGGCAGTGGAGGTGGTCCCTACGGAAACTCACCCC
TCGGCTACGGTACTCCCAGCTCCAATTCCATGGTGGGCTTTGGCCTGGGC
AACGGAGGCAATGGCGCGGCCGGTGGCAACAACAACTTCGGAGGGGCTGG
ACCCAGTTGGGCGGCTGCCCACCTCCACCACGACTCCATTGGCTATATAT
CCAACGAGCATGGAGCAGCAGCACTGGGCAACATGCCAGTTCCGGTTGGC
ATGTTCATGAACATGAGCAATATTCCGCCGCGTTTCTACAACCAGCACCA
GCAGGCGATCATGGCGGTCAAGCAGAATCGCGCCATTCAACAACAGACGG
GTAATTTCTCTCCCGGTAACTCGGGTCCTGGAGTCACTGGAGTCGGAGTC
GGACGAAGCGCCACCCCAGGCGGCAATAAGAAGACCAACAAGCTGGGAAA
ATCGCGCGTAACGGGCGGTGGAACTGGCGGGGCACCGCTAACACAAGGAA
GCTCGGTATGCAATGCTGCTCCATACAGTCAGCACCCGATGCCTTTGTCG
CTGCAGATGACCCAGCCCAGCGGATTTGCTCTGTCCCAGCAGCCGGAACT
TTCACAGGACTTTGGGCAAATATCGCAGATGGACGGTTTGCTATCCCAGG
ATGTTGCCTTTAACGCGTCGGGCGAGCGGAGCTTGAATCAGTTCTCACAG
CCTTATTGAAAGCTTTCTAGACCAT
BS11015.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:15:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Upf1-RB | 3543 | CG1559-PB | 1..3543 | 17..3559 | 17715 | 100 | Plus |
| Upf1-RA | 3543 | CG1559-PA | 1..3543 | 17..3559 | 17715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:15:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Upf1-RB | 4709 | CG1559-RB | 366..3916 | 9..3559 | 17725 | 99.9 | Plus |
| Upf1-RA | 5187 | CG1559-RA | 395..3945 | 9..3559 | 17725 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:15:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11901349..11904681 | 3517..185 | 16665 | 100 | Minus |
| X | 23542271 | X | 11904744..11904919 | 184..9 | 850 | 98.9 | Minus |
| X | 23542271 | X | 11901238..11901280 | 3559..3517 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:15:22 has no hits.
BS11015.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:47:29 Download gff for
BS11015.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Upf1-RA | 372..3913 | 17..3558 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:09:52 Download gff for
BS11015.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Upf1-RA | 403..3944 | 17..3558 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:21:46 Download gff for
BS11015.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Upf1-RA | 372..3913 | 17..3558 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:29 Download gff for
BS11015.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Upf1-RA | 403..3944 | 17..3558 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:29 Download gff for
BS11015.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11901239..11901279 | 3518..3558 | 100 | <- | Minus |
| X | 11901349..11904681 | 185..3517 | 100 | <- | Minus |
| X | 11904744..11904911 | 17..184 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:09:52 Download gff for
BS11015.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11795272..11795312 | 3518..3558 | 100 | <- | Minus |
| arm_X | 11795382..11798714 | 185..3517 | 100 | <- | Minus |
| arm_X | 11798777..11798944 | 17..184 | 100 | | Minus |
BS11015.3prime Sequence
902 bp (816 high quality bases) assembled on 2006-04-19
> BS11015.3prime
ATGGTCTAGAAAGCTTTCAATAAGGCTGTGAGAACTGATTCAAGCTCCGC
TCGCCCGACGCGTTAAAGGCAACATCCTGGGATAGCAAACCGTCCATCTG
CGATATTTGCCCAAAGTCCTGTGAAAGTTCCGGCTGCTGGGACAGAGCAA
ATCCGCTGGGCTGGGTCATCTGCAGCGACAAAGGCATCGGGTGCTGACTG
TATGGAGCAGCATTGCATACCGAGCTTCCTTGTGTTAGCGGTGCCCCGCC
AGTTCCACCGCCCGTTACGCGCGATTTTCCCAGCTTGTTGGTCTTCTTAT
TGCCGCCTGGGGTGGCGCTTCGTCCGACTCCGACTCCAGTGACTCCAGGA
CCCGAGTTACCGGGAGAGAAATTACCCGTCTGTTGTTGAATGGCGCGATT
CTGCTTGACCGCCATGATCGCCTGCTGGTGCTGGTTGTAGAAACGCGGCG
GAATATTGCTCATGTTCATGAACATGCCAACCGGAACTGGCATGTTGCCC
AGTGCTGCTGCTCCATGCTCGTTGGATATATAGCCAATGGAGTCGTGGTG
GAGGTGGGCAGCCGCCCAACTGGGTCCAGCCCCTCCGAAGTTGTTGTTGC
CACCGGCCGCGCCATTGCCTCCGTTGCCCAGGCCAAAGCCCACCATGGAA
TTGGAGCTGGGAGTACCGTAGCCGAGGGGTGAGTTTCCGTAGGGACCACC
TCCACTGCCACCGTACTGTCCGCCATTCATTGACTGTCCCACCATTTGGC
GACCTTGGCCGTAACCGCCACTGCGGTCGTAAATGGAGCCTGGCACCATC
ACTTCCTTGGCATCGGCAATAATGGTGGACATAAAGTGTGCCCCAATGTT
CATGCTGTTGACAAGCTTTTTTGGGCTTCTGGAAGTGGATTAGCGACTTC
TT
BS11015.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:00:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1559-PA | 3543 | Upf1-RA | 2689..3543 | 871..17 | 4275 | 100 | Minus |
| CG1559-PA | 3543 | Upf1-RA | 2663..2693 | 898..868 | 155 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 20:03:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Upf1-RB | 4709 | CG1559-RB | 3032..3916 | 902..17 | 4390 | 99.8 | Minus |
| Upf1-RA | 5187 | CG1559-RA | 3061..3945 | 902..17 | 4390 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 20:03:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11901349..11902191 | 59..902 | 4155 | 99.8 | Plus |
| X | 23542271 | X | 11901238..11901280 | 17..59 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 20:03:49 has no hits.
BS11015.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:56:11 Download gff for
BS11015.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Upf1-PA | 2659..3543 | 17..902 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:22:44 Download gff for
BS11015.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1559-PA | 2659..3543 | 17..902 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 11:35:43 Download gff for
BS11015.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Upf1-RA | 3061..3945 | 17..902 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 22:48:25 Download gff for
BS11015.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Upf1-RA | 3061..3945 | 17..902 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 22:48:25 Download gff for
BS11015.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11901238..11901279 | 17..58 | 100 | <- | Plus |
| X | 11901349..11902191 | 59..902 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 11:35:43 Download gff for
BS11015.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11795271..11795312 | 17..58 | 100 | <- | Plus |
| arm_X | 11795382..11796224 | 59..902 | 99 | | Plus |
BS11015.5prime Sequence
919 bp (778 high quality bases) assembled on 2006-04-19
> BS11015.5prime
GAAGTTATCAGTCGACATGAGCGTGGACACGTACGCGCCCAGCTCGGCGC
TCTCGTTCCTGGACATGGACGACAACGAGCTGCTTCCGGGAGCGGATACT
CAACCCACGCAGTACGATTACCGCGACTTTACCATGCCCTCCACCTCGCA
GAGCCAGACCCAGAACGATCAGCTGGAGATTGCCCAACGCTGCTCTGCCG
GAGACTCGCATCCACGACTGGCCAGCATCACCAACGATCTGGCCGATCTG
CAGTTCGAAGAGGAGGACGACGAGCCTGGCAGCTCGTATGTGAAGGAGCT
GCCGCCGCATGCGTGCAAGTATTGCGGCATCCATGATCCAGCCACGGTGG
TCATGTGCAACAACTGCCGCAAATGGTTTTGCAACGGTCGTGGAAGCACT
TCCGGTTCGCACATCATCAACCATCTGGTGAGGGCCAAGCATCGCGAGGT
GACGCTCCACGGGGAAGGTCCCCTGGGCGAGACAATCCTGGAGTGCTACT
CCTGTGGTGTGCGCAACGTCTTTGTGCTGGGCTTCATTCCGGCCAAGGCC
GATTCTGTGGTCGTGCTGCTCTGCCGTCAGCCGTGTGCCGCCCAGAATTC
GCTAAAGGATATGAACTGGGACCAGGAACAGTGGAAGCCTCTAATTGCAG
ACCGCTGCTTTTTGGCCTGGCTGGTAAAGCAACCCAGCGAACAGGGACAG
CTGCGAGCTCGCCAAATCTCAGCCGCTCAGATCAACAAGCTGGAGGAGCT
ATGGAAGGAGAATATTGAGGCCACGTTTCAGGATCTGGAGAAGCCAGGCA
TTGACTCGGAGCCAGCACATGTGCTACTCCGCTACGAGGATGGCTATCAG
TACGAGAAGACCTTTGGGCCGCTGGTCCCGCTTGAGGCCGATTACGACCA
AAAACTGAAGGAGTCTGCC
BS11015.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:00:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1559-PA | 3543 | Upf1-RA | 1..903 | 17..919 | 4440 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 05:28:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Upf1-RB | 4709 | CG1559-RB | 366..1276 | 9..919 | 4480 | 99.5 | Plus |
| Upf1-RA | 5187 | CG1559-RA | 395..1305 | 9..919 | 4480 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 05:28:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11903947..11904681 | 919..185 | 3630 | 99.6 | Minus |
| X | 23542271 | X | 11904744..11904919 | 184..9 | 850 | 98.9 | Minus |
Blast to na_te.dros performed on 2015-02-04 05:28:09 has no hits.
BS11015.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:56:12 Download gff for
BS11015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Upf1-PA | 1..903 | 17..919 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:22:45 Download gff for
BS11015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1559-PA | 1..903 | 17..919 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 07:13:34 Download gff for
BS11015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Upf1-RA | 395..1305 | 9..919 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 06:45:35 Download gff for
BS11015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Upf1-RA | 395..1305 | 9..919 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 06:45:35 Download gff for
BS11015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11903947..11904681 | 185..919 | 99 | <- | Minus |
| X | 11904744..11904919 | 9..184 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 07:13:34 Download gff for
BS11015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11797980..11798714 | 185..919 | 99 | <- | Minus |
| arm_X | 11798777..11798952 | 9..184 | 98 | | Minus |
BS11015.pep Sequence
Translation from 16 to 3558
> BS11015.pep
MSVDTYAPSSALSFLDMDDNELLPGADTQPTQYDYRDFTMPSTSQSQTQN
DQLEIAQRCSAGDSHPRLASITNDLADLQFEEEDDEPGSSYVKELPPHAC
KYCGIHDPATVVMCNNCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGE
GPLGETILECYSCGVRNVFVLGFIPAKADSVVVLLCRQPCAAQNSLKDMN
WDQEQWKPLIADRCFLAWLVKQPSEQGQLRARQISAAQINKLEELWKENI
EATFQDLEKPGIDSEPAHVLLRYEDGYQYEKTFGPLVRLEAEYDQKLKES
ATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGELYNP
WSEIGHVIKVPDNFGDDVGLELKSSTNAPVKCTSNFTVDFIWKCTSFDRM
TRALCKFAIDRNSVSNFIYSRLLGHGRADSNDEVLFRGPQPKLFSAPHLP
DLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLV
CAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNME
TNSELKKLQQLKDETGELSSADEKRYRNLKRAAENQLLEAADVICCTCVG
AGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPV
VMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEG
SLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEA
ANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQE
IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGI
IIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQKPKKLV
NSMNIGAHFMSTIIADAKEVMVPGSIYDRSGGYGQGRQMVGQSMNGGQYG
GSGGGPYGNSPLGYGTPSSNSMVGFGLGNGGNGAAGGNNNFGGAGPSWAA
AHLHHDSIGYISNEHGAAALGNMPVPVGMFMNMSNIPPRFYNQHQQAIMA
VKQNRAIQQQTGNFSPGNSGPGVTGVGVGRSATPGGNKKTNKLGKSRVTG
GGTGGAPLTQGSSVCNAAPYSQHPMPLSLQMTQPSGFALSQQPELSQDFG
QISQMDGLLSQDVAFNASGERSLNQFSQPY*
BS11015.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:51:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Upf1-PB | 1180 | CG1559-PB | 1..1180 | 1..1180 | 6209 | 100 | Plus |
| Upf1-PA | 1180 | CG1559-PA | 1..1180 | 1..1180 | 6209 | 100 | Plus |
| CG7504-PC | 1417 | CG7504-PC | 903..1416 | 440..905 | 428 | 29.9 | Plus |
| CG7504-PB | 1676 | CG7504-PB | 1162..1675 | 440..905 | 428 | 29.9 | Plus |
| CG6701-PD | 1333 | CG6701-PD | 576..1041 | 423..879 | 405 | 30 | Plus |
