Clone BS11016 Report

Search the DGRC for BS11016

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:110
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptCG42389-RG
Protein status:BS11016.pep: full length peptide match
Sequenced Size:4274

Clone Sequence Records

BS11016.complete Sequence

4274 bp assembled on 2009-12-07

GenBank Submission: KX802483

> BS11016.complete
GAAGTTATCAGTCGACATGGATGGTTCAAAGAAAACGCTGCTCATTAAAA
TAAGCGCGAACGGCACTTCGCATTTCTACACTCCGGTGGCGGGCTATCCT
GGCCCAGGACCTGCGGGCAATGGTCCACCACACTATCACTTGCCGCCACC
ACCGCCGCCGCAACAGCAGCAGCAGCAGCCACCACAACAACCACAGCAGC
AGGCGCCACAAGGACCACCACCGCCACAGCAACAACAACAACAGCAGCAG
CAGGTGGCACCACCTGCGGTCCAAGGAGCACCAAGCACTGGAAGTGTAGG
AGCTGCCCAAGGAGCACCAGCCACTGCGACAGCCACCCATACACACGCCC
ATTCGCACTCCCACTCACACGCCCACTCGCACACACATCCCCAGCCACAT
GCACATTCCCCGCACTCGCCATCGCCGCCCAATTATCGGGATGAACGCAG
CCAGCGGCAGCACAACAAGCTGCTCCGGAAGCTGGAGAAGCAGCGGGAGT
CAAATCCCCCGCATTCGCCATCTCCACGTCGTGCCAACGAACTGAATGGT
CACAATAATAACAACATTCCTCCGGGTGTGCCCCTGCCCGGTCACCTCAA
TAACCACCATCATGCAGTGAACCATCAAGGACGTCGCCTGCCGCAGCAGC
ACCAAGGGCAGGCCCATCAGGTGGCACAGCAGCAACAGTCGCAGGCCAGG
AACGGGAATCCGCAGCATCCCCAGAGAGCCGGCAGCAGTGTGGGTGGCGC
CAGCTCCGTGGGAACTTCCGAGGATGGCGAGGATAACTCCAGTCTGGCCG
GCGATGATGAGGAGGAGTACCATCGCGAGAACAGCATCATTGAGCAAATC
TCAGCTATTGAAAAACCTGAGGTAATCGATGTGACTTCGCGGGCGGCCAA
GATAATTTGGGAGAGTCCAGCCATTGCGAATACAGTGACGGTGGATATGC
GGCAGCTCCGGTACCAAGTGCTCCTCTGTGATTCTGGAAAGCAGTGCAAG
TACAAGAGCTTGTACCAAGGCGAGGCCTACGAGTGCATTGTGCAAGACCT
GCAGCCGGGTCAGGATTACCTAGTCCGCTTGCAGGTGCACTACCAAAAAC
TTACGGGAACAGTGAGTGATCCCACAGAATTTCGGACGCCACCCTGTGAG
CCAGACCAACCGCCGCCTCCGAAACTGGTTTCCCGGACCAAGAACTCCAT
AAACCTTCGATGGGCTGCTCCGGCAGCAAACGGCGCCAGCATACAGCACT
ATCTGCTGGAATACGATGAGGGCAGGATGCCGGGACAACCGCAAAAGTTT
GTGGAGTTGGCCAAGATCAAGGCCAAGCACTATGTCATTGGAAAACTGCA
GCCGACTACGGTCTACAGTTTCCGTTTGGCAGCGGTTAATGAAGCGGGTC
AGAGTCCCTATTCTCCGGTGGCCAGCTACAGCACCTCCGGAAATCCTCCG
CCAGTGCCTAAACCACCTCAGCTGCTGGCCAGCAGTTCCAGTTCCCTAAA
ACTGGGCTGGGAGCGGCGGGCTCAAGATGGTGACTTCCTGCTGCAACTAC
AAGATGCAGAAACAGGTCATGGTTTCCTCAATACCTACAAGGGTACAGAG
CTGCAAACGGAGTGCCTGCAATTAAGGCGGGCTAGCAGCTACCAATTCCG
TCTGAGATCCGAAAACGAAGCCGGTTTTTCACCCTGGTCACCGGAGGTTA
GCTACCGCACTTTAGCGGAACGCCCGGGAAGGCCAGGGAAACCGCATGCC
AAGGGAAAGATTCATGGCACTCAGTTTAAGGCCCGCTGGGATGCACCCAG
CGATTCCGGTGGTGCTGAGATCCTGTGCTACCACTTGGAGTTAAGTGCCG
CTGGGCCAGCTTTCGAAAGGATCTACAGTGGCGCCGAAACAGAAGCCATG
TGCGAAAGACTTCAGCCGGGTACCACATACGCTCTGCGAGCCTGTTGCGA
AGGTCCAGCTGGTCAGAGTCCGTACTCCGATATAGGACACGTCACCACGG
AGGCGGTGCCACCATCTGCTCCGCCTCCACCGCATTGCAGTGATCCTCCC
TCGCCGTACGCCGCCCTACTGAAGCTCCGGCCTCCGGAATATAACGGTGG
AGCTCCGATCTTAGAGTTCGAAGCCCAGATGCGTCGCCTAGAGCAAGTGC
AGCCTCCGCAGTTGGTTTACCGCGGCAAGCAGACCTACTTTGTGGCGCAG
GATCTGACACCCGGTGGCATGTATGAAACCCAAGTAAGGGCCATTAACCG
GATTGGCGCCGGTAGCTGGTCCCAATGGATGAGATTTACGGCAGCAGCTG
CTGCTCCTGGAGTTCCCGAAGAGTTACGGGTTCTGGTGAAGTCGGCCACC
CACCTGGGTGTCAGCTGGCAACCGCCTTTACAGGAGAATGGTGCCCCAGT
GACCAGTTACACCCTAAAAAGTGCCAGCCAAGAAAGAAAGGAAGATGACT
CGGAGGAGGAGGTCAAAGAGCCGCCTAGCTCCGAATTCCACAACTGCTAT
CAGGGACCACAAACCTGCGCTGAACTGAGAAACCTTTCGCCCTACACACG
CTACCATTTCCGCATCCAGGCGAGCAACTCAGCCGGAACGGGAAACTCCT
CCGACGTGATAAGTGTATGTACGCCAGCCGCAGTTCCAGGAGCTCCTCAA
ATGCAGGGCTATGAGTTCACCGCCCAGGAGGTCACACTCAACTGGACCCA
GCCGGCGGCCCACGGCTCGCCCATATGCTCCTACAACATTGAGTACGGGG
AGAGAACTATCGCCACTCCGGACGCCTGTACACGCTATACTGTTAGTGGC
TTAATGCCGGAAACCGGCTACAAGTTCCGTGTTCAAGCGGTCAACGCCAT
TGGTGCCGGAGCTTTTAGTGCCTATGCTAAGCTGACCACCCAACCAGCTC
CTCCGGCACCACCTCGCTTAGAGTGCAGCGGTGCTGGCCACAATTACATA
AAGCTCAAGTGGGGTGAGAACGGAAACGGCAAAGTGGTAAACTCCAATCC
GTCTGGAAATGGAGGCGACTTTACCAAGTACTTTGTGGAGATGTATGTGG
CCAGAGCTAAGCAGTTCCAGGCCGTCTACTCTGGCACGAATTGTATGTGC
AAGGTGCACAAACTGCAAGAGCGAAGCAGCTACACTTTCCGGATTTATGC
CCATACCGATCGGGCTGGCGATGGGGATTACTCGGAGGAATTTGTTTTTG
AAACTTCGGCCACTCTGCCGGCGAACATAAAGCCTCCTCGTGTTGTCCAA
GAGGGAAGCGTATGCCTAATGGAGCTGCCTGGCCAACTGGGAATGCAACT
AACACTGGAGTGGCAGCACTCAAAGAACTCCTTCAATGATCGTGTGGAGT
ACGAATTGCAGTATGCAGTTTTGGGCGCAGCTGAATTGGAGGGCGAATCA
TTGTCGCCAAAAGGACGCAGCAGCAGTTCCAGTGGCAGCTCAAATGGAGC
GCCAATTAATTTGCCCAACCATGACTACAGGCAATTGTATCGCGGTCCAG
AGACCAAATTCACCATTGACAATCTGGCAGCTGGTACATGCTACCAGTTC
CGAGTGTGTCCAGTGCGGATAGCGGCTGGCGGAGAACTGCTGTACGGTCA
GCCGTCCAGTCCGTTGCGCTACCAGGTGCCCAGTGAACTGGATCCTAGCT
CGGCGACCTGTCATCACCACCTGCACGGCTCCACCGCAACACCGGCGATG
GCCTCCAGCCAGAGAAGCAGCCGAAAACTGTCCGCCGGCAATGGCTCAAC
CAACGGTCTGCACATGCGATCGGTAAGTGCGTCGGCAATAAGTGGAGCGA
GCGGCGTGGGAGCAGATCCCGTGGCAATTGGACGACTGCAGCAGGAGCTT
TCTGGTTTCAATGCCTGCGCAGATCCCCAGCATCACCATCATCATCATCA
CCACCACCACCATCAGCCGTGCGGTGGCGGCGTTGGAGGAGCCGGTGGAA
TATCCGGGGCAACGGACTCGCACCACCAGCATCAGCACCACATGCACCAC
TCACATCACATGCACCACGCCCACCATCCGCACACCGGAATGGGCGGTAG
CTCTTCGAACTCCAGCTCCTCAACGGCGGCGGCCATATCCTCCAGTTTGG
CCCAGGCGGGAGGATTAAGGCGGATCGTTTGTAAAGTTACTTCACTGTAC
TCCAACCGGAGGCGTCTTAGCGACCAACAAAAGGCCGTGTGCATTGTGGT
CTCCTTCCTAGTGGGCACTTTCCTGGTCGCCATGCTCGTAAATATGTTGA
GGGGCTAAAAGCTTTCTAGACCAT

BS11016.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG42389-RG 4242 CG42389-PG 1..4242 17..4258 21195 100 Plus
CG42389-RH 5340 CG42389-PH 1132..5340 50..4258 21030 100 Plus
CG42389-RF 5289 CG42389-PF 1081..5289 50..4258 21030 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:16:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG42389-RG 4759 CG42389-RG 301..4544 17..4260 21205 100 Plus
CG42389-RH 7708 CG42389-RH 2060..6270 50..4260 21040 100 Plus
CG42389-RF 6365 CG42389-RF 1923..6133 50..4260 21040 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16658024..16661780 504..4260 18770 100 Plus
2L 23513712 2L 16657499..16657952 50..503 2270 100 Plus
Blast to na_te.dros performed 2014-11-28 02:16:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6726..6858 603..737 145 62 Plus
roo 9092 roo DM_ROO 9092bp 1057..1144 604..694 141 64.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2390 640..724 137 65.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6812..6913 638..738 129 62.5 Plus
roo 9092 roo DM_ROO 9092bp 1082..1132 644..694 120 70.6 Plus

BS11016.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:47:39 Download gff for BS11016.complete
Subject Subject Range Query Range Percent Splice Strand
CG42389-RG 283..4522 17..4256 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:10:11 Download gff for BS11016.complete
Subject Subject Range Query Range Percent Splice Strand
CG42389-RG 301..4540 17..4256 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:19:43 Download gff for BS11016.complete
Subject Subject Range Query Range Percent Splice Strand
CG31738-RA 283..4522 17..4256 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:47 Download gff for BS11016.complete
Subject Subject Range Query Range Percent Splice Strand
CG42389-RG 301..4540 17..4256 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:47 Download gff for BS11016.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16657397..16657429 17..49 100 -> Plus
2L 16657499..16657952 50..503 100 -> Plus
2L 16658024..16661776 504..4256 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:10:11 Download gff for BS11016.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16657397..16657429 17..49 100 -> Plus
arm_2L 16657499..16657952 50..503 100 -> Plus
arm_2L 16658024..16661776 504..4256 99   Plus

BS11016.3prime Sequence

799 bp (759 high quality bases) assembled on 2006-04-19

> BS11016.3prime
ATGGTCTAGAAAGCTTTTAGCCCCTCAACATATTTACGAGCATGGCGACC
AGGAAAGTGCCCACTAGGAAGGAGACCACAATGCACACGGCCTTTTGTTG
GTCGCTAAGACGCCTCCGGTTGGAGTACAGTGAAGTAACTTTACAAACGA
TCCGCCTTAATCCTCCCGCCTGGGCCAAACTGGAGGATATGGCCGCCGCC
GTTGAGGAGCTGGAGTTCGAAGAGCTACCGCCCATTCCGGTGTGCGGATG
GTGGGCGTGGTGCATGTGATGTGAGTGGTGCATGTGGTGCTGATGCTGGT
GGTGCGAGTCCGTTGCCCCGGATATTCCACCGGCTCCTCCAACGCCGCCA
CCGCACGGCTGATGGTGGTGGTGGTGATGATGATGATGGTGATGCTGGGG
ATCTGCGCAGGCATTGAAACCAGAAAGCTCCTGCTGCAGTCGTCCAATTG
CCACGGGATCTGCTCCCACGCCGCTCGCTCCACTTATTGCCGACGCACTT
ACCGATCGCATGTGCAGACCGTTGGTTGAGCCATTGCCGGCGGACAGTTT
TCGGCTGCTTCTCTGGCTGGAGGCCATCGCCGGTGTTGCGGTGGAGCCGT
GCAGGTGGTGATGACAGGTCGCCGAGCTAGGATCCAGTTCACTGGGCACC
TGGTAGCGCAACGGACTGGACGGCTGACCGTACAGCAGTTCTCCGCCAGC
CGCTATCCGCACTGGACACACTCGGAACTGGTAGCATGGTACCAGCTGCC
AGATTGTCAATGGTGAAATTTGGTCTCTGGACCGCGATACAATTGCCTG

BS11016.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:00:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG31738-PB 5103 CG31738-RB 4382..5103 738..17 3610 100 Minus
CG31738-PA 4242 CG31738-RA 3521..4242 738..17 3610 100 Minus
CG31738-PB 5103 CG31738-RB 4323..4355 799..767 165 100 Minus
CG31738-PA 4242 CG31738-RA 3462..3494 799..767 165 100 Minus
CG31738-PB 5103 CG31738-RB 4354..4382 767..739 145 100 Minus
CG31738-PA 4242 CG31738-RA 3493..3521 767..739 145 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG42389-RH 7708 CG42389-RH 5488..6270 799..15 3875 99.7 Minus
CG42389-RG 4759 CG42389-RG 3762..4544 799..15 3875 99.7 Minus
CG42389-RF 6365 CG42389-RF 5351..6133 799..15 3875 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 11:25:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16660998..16661780 799..15 3825 99.7 Minus
Blast to na_te.dros performed on 2015-02-01 11:25:05 has no hits.

BS11016.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:56:13 Download gff for BS11016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31738-PA 3462..4242 17..799 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:22:47 Download gff for BS11016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31738-PA 3462..4242 17..799 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:37:31 Download gff for BS11016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG42389-RF 5437..6219 15..799 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:11:59 Download gff for BS11016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG42389-RF 5351..6133 15..799 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:11:59 Download gff for BS11016.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 16660998..16661780 15..799 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:37:31 Download gff for BS11016.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16660998..16661780 15..799 99   Minus

BS11016.5prime Sequence

923 bp (814 high quality bases) assembled on 2006-04-19

> BS11016.5prime
GAAGTTATCAGTCGACATGGATGGTTCAAAGAAAACGCTGCTCATTAAAA
TAAGCGCGAACGGCACTTCGCATTTCTACACTCCGGTGGCGGGCTATCCT
GGCCCAGGACCTGCGGGCAATGGTCCACCACACTATCACTTGCCGCCACC
ACCGCCGCCGCAACAGCAGCAGCAGCAGCCACCACAACAACCACAGCAGC
AGGCGCCACAAGGACCACCACCGCCACAGCAACAACAACAACAGCAGCAG
CAGGTGGCACCACCTGCGGTCCAAGGAGCACCAAGCACTGGAAGTGTAGG
AGCTGCCCAAGGAGCACCAGCCACTGCGACAGCCACCCATACACACGCCC
ATTCGCACTCCCACTCACACGCCCACTCGCACACACATCCCCAGCCACAT
GCACATTCCCCGCACTCGCCATCGCCGCCCAATTATCGGGATGAACGCAG
CCAGCGGCAGCACAACAAGCTGCTCCGGAAGCTGGAGAAGCAGCGGGAGT
CAAATCCCCCGCATTCGCCATCTCCACGTCGTGCCAACGAACTGAATGGT
CACAATAATAACAACATTCCTCCGGGTGTGCCCCTGCCCGGTCACCTCAA
TAACCACCATCATGCAGTGAACCATCAAGGACGTCGCCTGCCGCAGCAGC
ACCAAGGGCAGGCCCATCAGGTGGCACAGCAGCAACAGTCGCAGGCCAGG
AACGGGAATCCGCAGCATCCCCAGAGAGCCGGCAGCAGTGTGGGTGGCGC
CAGCTCCGTGGGAACTTCCGAGGATGGCGAGGATAACTCCAGTCTGGCCG
GCGATGATGAGGAGGAGTACCATCGCGAGAACAGCATCATTGAGCAAATC
TCAGCTATTGAAAAACCTGAGGTAATCGATGTGACTTCGCGGGCGGCCAA
GATAATTTGGGGAGAGTCAAGCC

BS11016.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:00:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG31738-PA 4242 CG31738-RA 1..895 17..911 4475 100 Plus
CG31738-PB 5103 CG31738-RB 895..1756 50..911 4310 100 Plus
CG32133-PA 6885 CG32133-RA 3504..3531 226..253 140 100 Plus
CG14441-PA 3378 CG14441-RA 2853..2880 226..253 140 100 Plus
CG32133-PA 6885 CG32133-RA 2497..2528 158..189 135 96.8 Plus
CG13830-PA 1983 CG13830-RA 916..942 227..253 135 100 Plus
CG14801-PD 2229 CG14801-RD 232..258 227..253 135 100 Plus
CG14801-PC 2286 CG14801-RC 289..315 227..253 135 100 Plus
CG14801-PA 2286 CG14801-RA 289..315 227..253 135 100 Plus
CG14801-PB 2364 CG14801-RB 367..393 227..253 135 100 Plus
CG6700-PA 2625 CG6700-RA 385..411 227..253 135 100 Plus
CG6118-PA 2832 CG6118-RA 2163..2189 227..253 135 100 Plus
CG11172-PA 4260 NFAT-RA 595..621 227..253 135 100 Plus
CG3696-PA 15969 kis-RA 595..621 227..253 135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:04:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG42389-RG 4759 CG42389-RG 301..1206 17..923 4495 99.8 Plus
CG42389-RH 7708 CG42389-RH 2060..2932 50..923 4330 99.8 Plus
CG42389-RF 6365 CG42389-RF 1923..2795 50..923 4330 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:04:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16657499..16657952 50..503 2270 100 Plus
2L 23513712 2L 16658024..16658431 504..911 2040 100 Plus
Blast to na_te.dros performed 2015-02-12 05:04:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6726..6858 603..737 145 62 Plus
roo 9092 roo DM_ROO 9092bp 1057..1144 604..694 141 64.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2390 640..724 137 65.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6812..6913 638..738 129 62.5 Plus
roo 9092 roo DM_ROO 9092bp 1082..1132 644..694 120 70.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6777..6883 621..724 113 58.9 Plus

BS11016.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:56:14 Download gff for BS11016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31738-PA 1..906 17..923 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:22:48 Download gff for BS11016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31738-PA 1..906 17..923 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 13:50:22 Download gff for BS11016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42389-RG 299..1206 14..923 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:55:36 Download gff for BS11016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42389-RG 299..1206 14..923 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:55:36 Download gff for BS11016.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16657395..16657429 14..49 97 -> Plus
2L 16657499..16657952 50..503 100 -> Plus
2L 16658024..16658442 504..923 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 13:50:22 Download gff for BS11016.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16657395..16657429 14..49 97 -> Plus
arm_2L 16657499..16657952 50..503 100 -> Plus
arm_2L 16658024..16658442 504..923 99   Plus

BS11016.pep Sequence

Translation from 16 to 4257

> BS11016.pep
MDGSKKTLLIKISANGTSHFYTPVAGYPGPGPAGNGPPHYHLPPPPPPQQ
QQQQPPQQPQQQAPQGPPPPQQQQQQQQQVAPPAVQGAPSTGSVGAAQGA
PATATATHTHAHSHSHSHAHSHTHPQPHAHSPHSPSPPNYRDERSQRQHN
KLLRKLEKQRESNPPHSPSPRRANELNGHNNNNIPPGVPLPGHLNNHHHA
VNHQGRRLPQQHQGQAHQVAQQQQSQARNGNPQHPQRAGSSVGGASSVGT
SEDGEDNSSLAGDDEEEYHRENSIIEQISAIEKPEVIDVTSRAAKIIWES
PAIANTVTVDMRQLRYQVLLCDSGKQCKYKSLYQGEAYECIVQDLQPGQD
YLVRLQVHYQKLTGTVSDPTEFRTPPCEPDQPPPPKLVSRTKNSINLRWA
APAANGASIQHYLLEYDEGRMPGQPQKFVELAKIKAKHYVIGKLQPTTVY
SFRLAAVNEAGQSPYSPVASYSTSGNPPPVPKPPQLLASSSSSLKLGWER
RAQDGDFLLQLQDAETGHGFLNTYKGTELQTECLQLRRASSYQFRLRSEN
EAGFSPWSPEVSYRTLAERPGRPGKPHAKGKIHGTQFKARWDAPSDSGGA
EILCYHLELSAAGPAFERIYSGAETEAMCERLQPGTTYALRACCEGPAGQ
SPYSDIGHVTTEAVPPSAPPPPHCSDPPSPYAALLKLRPPEYNGGAPILE
FEAQMRRLEQVQPPQLVYRGKQTYFVAQDLTPGGMYETQVRAINRIGAGS
WSQWMRFTAAAAAPGVPEELRVLVKSATHLGVSWQPPLQENGAPVTSYTL
KSASQERKEDDSEEEVKEPPSSEFHNCYQGPQTCAELRNLSPYTRYHFRI
QASNSAGTGNSSDVISVCTPAAVPGAPQMQGYEFTAQEVTLNWTQPAAHG
SPICSYNIEYGERTIATPDACTRYTVSGLMPETGYKFRVQAVNAIGAGAF
SAYAKLTTQPAPPAPPRLECSGAGHNYIKLKWGENGNGKVVNSNPSGNGG
DFTKYFVEMYVARAKQFQAVYSGTNCMCKVHKLQERSSYTFRIYAHTDRA
GDGDYSEEFVFETSATLPANIKPPRVVQEGSVCLMELPGQLGMQLTLEWQ
HSKNSFNDRVEYELQYAVLGAAELEGESLSPKGRSSSSSGSSNGAPINLP
NHDYRQLYRGPETKFTIDNLAAGTCYQFRVCPVRIAAGGELLYGQPSSPL
RYQVPSELDPSSATCHHHLHGSTATPAMASSQRSSRKLSAGNGSTNGLHM
RSVSASAISGASGVGADPVAIGRLQQELSGFNACADPQHHHHHHHHHHHQ
PCGGGVGGAGGISGATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSS
SSTAAAISSSLAQAGGLRRIVCKVTSLYSNRRRLSDQQKAVCIVVSFLVG
TFLVAMLVNMLRG*

BS11016.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG42389-PG 1413 CG31738-PA 1..1413 1..1413 7596 100 Plus
CG42389-PH 1779 CG42389-PH 378..1779 12..1413 7543 100 Plus
CG42389-PF 1762 CG31738-PB 361..1762 12..1413 7543 100 Plus
CG42389-PE 2064 CG42389-PE 663..2064 12..1413 7543 100 Plus
Lar-PB 2011 CG10443-PB 304..984 379..1063 320 22.1 Plus