Clone Sequence Records
BS11022.3prime Sequence
849 bp (763 high quality bases) assembled on 2006-04-19
> BS11022.3prime
ATGGTCTAGAAAGCTTCTACCGCGCCGATTGCACCGCCCGCTGCTTGCCC
GGCGTCGTCGTGGACGCCACGCTCATACTGTGACCGGAGCCCTGTGTTCC
GATGGCAACTGTCTTTGTGCATCGAATGCAGATATAGTCGTCGTCGGGCT
TTATCTGGCTGCGATTGAGGCCCACACAGTACATGTGGAACCATTCGTTG
CAGCCGCCGTCGCACTGCACCCAGTCCACCTCTCGCCCGGTTGGCTTGTG
GCAGTTCTCCGCCCGGCACTCCTCCTCGTCGTCCTCCTGCGCCGCCTGTT
GAGACCGTTGCGCGTGCTTCTTCTGACCGCCAGTCGCATTATTGCCTCCA
GTAGCTGCTCCCTGGCCGCTGGTGGTGTTGCTGTTCAAATTGGTACTGCT
GTTGCTATTGTTCGTGCTGTTATTATTATTGTTGTTGTTATTATTGGTGG
CTGTGGTTGAGGTGCGCTTTCGCTTTTTGTGCGTCGAGCCGGGTGTGGGC
GTCGTCGTCGCAGAATTGCCACCACCTGATCCTGTACTGGAGTTCGTATT
ACCGCCGTTGGCCTGCTTATTCTCGGCATCGGCATCCGCACCCGGAGTGG
TGGATGCTGCTGGCGATGCCTTGGCATCGCTCTTGCGTGCCGCTGCCGCT
GATCCCTTCTTGCCCGGTGTCTGCTTCGGTGTGCTCTGCTTCTTGCGCGG
CACTGCCGAGTTGCCGCCGGTGTCGTTGGAGCGCCTCTTCTTGTTGCGTC
CGCTGTTGCTCGCAGAACCCGTTGCCCCGCCACTATTGCTGTTGCTATTG
GGACTATTTTGTACCATCAGACTATCGTTAGAGTCTTCGGCGCCGGATG
BS11022.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:00:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9088-PA | 5517 | lid-RA | 4685..5517 | 849..17 | 4165 | 100 | Minus |
| CG9088-PB | 5517 | lid-RB | 4685..5517 | 849..17 | 4165 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:34:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lid-RF | 7004 | CG9088-RF | 4930..5763 | 849..16 | 4170 | 100 | Minus |
| lid-RE | 6941 | CG9088-RE | 4930..5763 | 849..16 | 4170 | 100 | Minus |
| lid-RD | 5841 | CG9088-RD | 4808..5641 | 849..16 | 4170 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:34:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5990641..5991474 | 16..849 | 4170 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 04:34:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6688..6864 | 538..373 | 166 | 59.6 | Minus |
BS11022.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:56:25 Download gff for
BS11022.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-PB | 4685..5517 | 17..849 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:23:03 Download gff for
BS11022.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9088-PB | 4685..5517 | 17..849 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:27:12 Download gff for
BS11022.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-RC | 4818..5651 | 16..849 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:01:26 Download gff for
BS11022.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-RD | 4808..5641 | 16..849 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:01:26 Download gff for
BS11022.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5990641..5991474 | 16..849 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:27:12 Download gff for
BS11022.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5990641..5991474 | 16..849 | 100 | | Plus |
BS11022.5prime Sequence
891 bp (763 high quality bases) assembled on 2006-04-19
> BS11022.5prime
GAAGTTATCAGTCGACATGTCCGCCAAAACTGAGGCGGACAACACGACGG
CCGCCAACTCCGGCGGCGGAGGAGTCGGGAGCGGCACCTCATCCGGCGGG
GGCGCATCCGCGAATGGAACAGCAACTCCGGCACGTCGTCTGCGTACCCG
AAACTCAACGGGCAACGGGACTAATAGTGGAAGTGAGTCCGTAAAGAAAT
CCAATGCTAACGACGAGCCCTCGACCCCAGTCACCCCGGCAGGAGCAACA
GGATCTCACACCCATGCTCCGCCAGGCATTTCTCCGGCGGTAATGGAACG
GCCTATGCCCAGTGTTCCCATGAATCACGCCAGCAGCAGTGTGTCAGCCA
GCAAAAAGTACCATAATAGTTGTCCTCATCCCACGCCCACGCCTGCGCCC
ACTGGGCACAAGAAGTCGGTCCACACGCAGCCGCACAGCAGCAACAAGTT
TGACCAGGGAAAGAACGAGGAGTTCCACTTTGACACGCCGCCAGAGTGCC
CTGTGTTCCGGCCCACAACTGAGGAGTTCAAGAATCCACTGGCCTACATC
AGCAAGATCCGCTCCATAGCTGAGAAGTGTGGAATCGCAAAGATCCTGCC
GCCGGCAACCTGGTCGCCGCCGTTTGCAGTGGACGTGGACAAGCTACGCT
TTGTGCCACGTGTCCAGCGGCTGAATGAGCTCGAGGCAAAGACGCGCGTC
AAACTCAACTTCCTTGATCAGATCGCAAAGTTCTGGGAGCTGCAAGGCTC
TTCACTAAAGATCCCAATGGTGGAGCGAAAGGCTCTCGACTTGTACACAC
TGCACCGCATCGTTCAGGAGGAGGGGGGCATGGAGCAAACCACAAAGGAT
CGCAAGTGGGGCCAGGTGGCCAACCGGATGCAGTACCCCCT
BS11022.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:00:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9088-PA | 5517 | lid-RA | 1..873 | 17..889 | 4315 | 99.7 | Plus |
| CG9088-PB | 5517 | lid-RB | 1..873 | 17..889 | 4315 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:42:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lid-RF | 7004 | CG9088-RF | 246..1118 | 17..889 | 4335 | 99.8 | Plus |
| lid-RE | 6941 | CG9088-RE | 246..1118 | 17..889 | 4335 | 99.8 | Plus |
| lid-RD | 5841 | CG9088-RD | 124..996 | 17..889 | 4335 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:42:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5995618..5996490 | 889..17 | 4335 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-13 09:42:31 has no hits.
BS11022.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:56:26 Download gff for
BS11022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-PB | 1..874 | 17..891 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:23:05 Download gff for
BS11022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9088-PB | 1..874 | 17..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:45:41 Download gff for
BS11022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-RC | 130..1007 | 10..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:03:11 Download gff for
BS11022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-RD | 120..997 | 10..891 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:03:11 Download gff for
BS11022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5995617..5996494 | 10..891 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:45:41 Download gff for
BS11022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5995617..5996494 | 10..891 | 99 | | Minus |
BS11022.complete Sequence
5549 bp assembled on 2008-08-15
GenBank Submission: KX802690
> BS11022.complete
GAAGTTATCAGTCGACATGTCCGCCAAAACTGAGGCGGACAACACGACGG
CCGCCAACTCCGGCGGCGGAGGAGTCGGGAGCGGCACCTCATCCGGCGGG
GGCGCATCCGCGAATGGAACAGCAACTCCGGCACGTCGTCTGCGTACCCG
AAACTCAACGGGCAACGGGACTAATAGTGGAAGTGAGTCCGTAAAGAAAT
CCAATGCTAACGACGAGCCCTCGACCCCAGTCACCCCGGCAGGAGCAACA
GGATCTCACACCCATGCTCCGCCAGGCATTTCTCCGGCGGTAATGGAACG
GCCTATGCCCAGTGTTCCCATGAATCACGCCAGCAGCAGTGTGTCAGCCA
GCAAAAAGTACCATAATAGTTGTCCTCATCCCACGCCCACGCCTGCGCCC
ACTGGGCACAAGAAGTCGGTCCACACGCAGCCGCACAGCAGCAACAAGTT
TGACCAGGGAAAGAACGAGGAGTTCCACTTTGACACGCCGCCAGAGTGCC
CTGTGTTCCGGCCCACAACTGAGGAGTTCAAGAATCCACTGGCCTACATC
AGCAAGATCCGCTCCATAGCTGAGAAGTGTGGAATCGCAAAGATCCTGCC
GCCGGCAACCTGGTCGCCGCCGTTTGCAGTGGACGTGGACAAGCTACGCT
TTGTGCCACGTGTCCAGCGGCTGAATGAGCTCGAGGCAAAGACGCGCGTC
AAACTCAACTTCCTTGATCAGATCGCAAAGTTCTGGGAGCTGCAAGGCTC
TTCACTAAAGATCCCAATGGTGGAGCGAAAGGCTCTCGACTTGTACACAC
TGCACCGCATCGTTCAGGAGGAGGGGGGCATGGAGCAAACCACAAAGGAT
CGCAAGTGGGCCAAGGTGGCCAACCGGATGCAGTACCCCTCAAGCAAAAG
TGTTGGCGCAACCCTGAAGGCACACTACGAACGCATCTTGCACCCCTTTG
AGGTATACACTTCGGGAAAGGTTCTAGGACCCACACCAACGTCGTCTGGA
TCTGGTAGCACACCCGTCAAATTGGAGGACGGAGGTGGAACCGATTACAA
AGCCCATGAAATTCCCACACGGCAGCAGATTGCGCCGCCCAACGAGACAA
ACACACGTCGCTCCAAGCGTTTCGGAAATTCCAATGCCAGCTGCGGCCTG
AGTGGTGTTACACCCACAACAAAGCCATCAGCGGGCGTATTTGTCAAGAC
GGAGACCAAGGAAGAATTTAAGAGGGATCTTCTCAGCAGTTTCAATGCTG
TCAACAGCGGCGGATCGCCATTAGCCACAGGTACTACGGCAAACACTCGC
GGAGCCAGCCAGAAGAAGGGAGGAGAGCCTCCAGCACTTATCGTAGACCC
ACTGATGAAGTACATTTGCCACATCTGCAATCGCGGCGACGTCGAGGAGT
CAATGCTGCTTTGCGATGGCTGCGACGACAGCTACCACACCTTTTGCCTG
TTGCCGCCTCTGACCAGCATACCCAAAGGCGAATGGCTTTGCCCGCGCTG
CGTCGTCGAGGAAGTAAGCAAACCGCAGGAGGCGTTTGGTTTTGAACAGG
CAGAGAGGGAATACACTCTGCAACAATTTGGACAAATGGCTGACCAGTTC
AAGCAAGAATACTTCCGCAAGCCGGTGCACTTGGTGCCCACTGAGATGGT
GGAGCGCGAGTTTTGGCGCATCGTGTCATCTATCGATGAAGACGTTACCG
TTGAGTATGGGGCGGACTTGCACACAATGGATCACGGCTCTGGTTTTCCC
ACTAAGAGCTCGTTATATTTGTTGCCGGGCGACCAAGAGTATGCAGAGTC
AAGCTGGAACCTTAACAACTTGCCGTTGCTGGAGGATTCCATTCTTGGTC
ACATCAATGCCGACATTAGCGGCATGAACGCTCCGTGGATGTATGTGGGC
ATGTGCTTCGCAGCCTTCTGCTGGCACAACGAGGACCACTGGAGCTACTC
CATCAACTATCTTCACTGGGGAGAACCTAAAACCTGGTACGGTGTTCCGG
GGTCCTGTGCTGAGCAGTTTGAAGAGACCATGAAGCAGGCAGCTCCAGAA
CTTTTTTCATCACAGCCCGATCTGCTTCACCAGCTGGTGACCATTATGAA
CCCGAACATTTTGATGAACAATCGTGTACCGGTATTCCGAACCGATCAGC
ATGCAGGCGAGTTTGTGATCACCTTTCCCAGGGCCTATCACGCAGGCTTT
AACCAAGGCTATAACTTCGCGGAGGCCGTCAATTTTGCACCTGCCGATTG
GCTGAAGATGGGGCGCGAGTGTGTTAACCACTATTCCATGCTGCGACGTT
TCTGTGTCTTTTCGCACGACGAGCTCGTTTGCAAGATGGCCCTGGAGCCA
GCGAAACTCACATTTGGCATCGCTACTGCCTGCTACATCGACATGGCCGA
AATGGTCGACACGGAGAAGAAACTGCGCAAATCGCTTTTGGAGTGGGGCG
TTACCCGCGCAGAGCGTCGCGCCTTCGAGCTAGTAAACGACGATGAGCGC
CATTGCCAAGAGTGCAACACCACGTGCTTCCTGTCGGCGGTGGCCTGCGA
GTGCAACGACAAGTTGATTGTCTGTTTGCGCCACTATACGGTACTCTGCG
GCTGTGCTCCTGAGAAGCACACTCTGATATATCGTTATACACTGGACGAG
ATGCCGCTGATGCTGCAGAAACTTAAGGTGAAGGCGCACAGCTTCGAGCG
ATGGCTTTCACGTTGCCGTGACATAGTCGATGCACATACACCCACCTCGG
TGACCCTGCAGGAGCTGCAGGAATTGTGCAAGGAGGCCGAGACGAAAAAG
TTTCCCTCCTCGCTGCTCATCGATCGCCTTAATGCTGCGGCCGTTGAGGC
AGAGAAATGTGTCACAGTCATACAGCAACTGGGTATCAATAAGGTGCGAA
CTCGCTCGGACCACAACCAGGAGGCTGCTCAGTACAAGCTAACCATGGAG
GAGCTAGAGTTGTTCGTTCAAGAAATCGATAATCTCTGCTGCATCATTGA
CGAGGGCGCTTCGGTGCGAGAGCTGCTTGTTTTGGGAAAACAGTTTGTGG
AGCGGTCCGAGAGCCAGCTGCAATTATCGCTGGAGTCTCTGGAGGAGAGT
GAGCTGGAAACGTTAATAAACGAAGGCAGCTCCTTACGCATCGAACTGCA
ACAGCTCGACCTACTGCAAAAGCGACTGAAGCAGTGCAAGTGGTACAAGC
GCTCGCAGGGATTGAGGGAGACCAGCTCGAAGCTGACCTACCAAGACGTG
AAGAACCTGTTACACATTGCGGCTGCTGACCTTGATCCCACGGATCCGTA
TGTCGACAAGGAGATGCGAAAATTGCAACAGATCGGTGCAGATATCGAAG
CCTGGGAGTCGCAGGCGGCCAAGTATTTCCGGCGACTGACCCAACAGCAC
GAACTGGGCGAAATTGAGCAGTTCTTGAAATCGGCCTCCGACATCAACGG
TCAAGTGCCTTCGCATGGACTGCTGAAGGATGCACTACGAAAGGCGCGTG
AGTGGCTACGGGCCGTTGAGCAGCTACAGCAAAACAACCACGTCACATAT
TGCCACACACTGGAGGCAATGATCGAGCGCGGCTTGAACATACCCATCCA
GCTGGAGGAGCTGAGCCGAATGCAGGGACACCTAAATAGTGCACATCAAT
GGAAGGACAATACAGCGTGCGCCTTCCTCAAGAAGGGCACCTTCTATACG
CTCTTGGAGGTTCTCATGCCCCGGTCGGACGCCATCAACATAGACTCGGA
TCTCAAGCCGCGCTTCCAGGATGATTTTCTGAAAGAGAAAAATCCGGCGG
AGATTGTGGCCAGCTTCAAGCACGCTGAGGAGCAGGAGCTGCTCGATATG
CGCGAACTTCGGCGGCAAAATATGAACAAGAATCCCATGCGCGATATGTT
CTGCTTGTGCAAGTCCGAGTTCCGAAACTTAATGTTCAATTGTCAGTTGT
GCCGCGATTGGTTTCACGAGGATTGCGTCCCACCGCCATCAGCCACAAAT
CAAAATGGAATTGTTAACGGCGGATCAGGACCAGGTACCAATCGACCCAA
GTGGCTATGTCCGAGCTGTGTGCGCTCGAAGAGACCGCGCCTAGAAACCA
TCCTTCCGCTACTTGTCCAGCTGCAGCAACTGCCCATCCGTCTGCCCGAG
GACGAAGCGTTGCGTTGCCTGGCGGAGCGTGCGATGAACTGGCAGGATCG
GGCCAGGAAAGCTCTTAGCAGTCCTGACGTCAGTGCGGCTCAAGAAGCGA
TTATGGCGCAGCAGCAGCAGAAGCGGCGCTCCGAGGGTGGAGCAGGGGTG
GGAAATATCAGCAGTCCACGGAAGCCACGTCGACGGGGGAGCCTGACGAA
AGAGGCAAGTGGTTCAACAGAGTCCGATGCCGACGACGATGACGACGAGG
ACGAATGTCGTCTTCGAATCGTCGAAGACAACTTTAGTAACGATGAAGAT
GAGCCTCGTACCGCCCCCGCGACCTCCACCGTCAACTCCGATCTCCTCAA
GCTGCTGTCCGACAGTGAAATTGAAAATTTGCTTGACCTGATGATGGAGG
GCGACCTGCTAGAGGTATCCTTAGATGAAACGCAGGAGCTGTGGCGCATT
CTAGAAACGATGCCGCCCACGTTGCTGCAGGCGGAGGCCATGGAGCGTGT
TGTCCAGTACATGCAGCGTCAGCGGCAACAGCATACAAATCCGCTGCCAA
CATCCGGCGCCGAAGACTCTAACGATAGTCTGATGGTACAAAATAGTCCC
AATAGCAACAGCAATAGTGGCGGGGCAACGGGTTCTGCGAGCAACAGCGG
ACGCAACAAGAAGAGGCGCTCCAACGACACCGGCGGCAACTCGGCAGTGC
CGCGCAAGAAGCAGAGCACACCGAAGCAGACACCGGGCAAGAAGGGATCA
GCGGCAGCGGCACGCAAGAGCGATGCCAAGGCATCGCCAGCAGCATCCAC
CACTCCGGGTGCGGATGCCGATGCCGAGAATAAGCAGGCCAACGGCGGTA
ATACGAACTCCAGTACAGGATCAGGTGGTGGCAATTCTGCGACGACGACG
CCCACACCCGGCTCGACGCACAAAAAGCGAAAGCGCACCTCAACCACAGC
CACCAATAATAACAACAACAATAATAATAACAGCACGAACAATAGCAACA
GCAGTACCAATTTGAACAGCAACACCACCAGCGGCCAGGGAGCAGCTACT
GGAGGCAATAATGCGACTGGCGGTCAGAAGAAGCACGCGCAACGGTCTCA
ACAGGCGGCGCAGGAGGACGACGAGGAGGAGTGCCGGGCGGAGAACTGCC
ACAAGCCAACCGGGCGAGAGGTGGACTGGGTGCAGTGCGACGGCGGCTGC
AACGAATGGTTCCACATGTACTGTGTGGGCCTCAATCGCAGCCAGATAAA
GCCCGACGACGACTATATCTGCATTCGATGCACAAAGACAGTTGCCATCG
GAACACAGGGCTCCGGTCACAGTATGAGCGTGGCGTCCACGACGACGCCG
GGCAAGCAGCGGGCGGTGCAATCGGCGCGGTAGAAGCTTTCTAGACCAT
BS11022.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:29:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lid-RF | 5517 | CG9088-PF | 1..5517 | 17..5533 | 27585 | 100 | Plus |
| lid-RE | 5517 | CG9088-PE | 1..5517 | 17..5533 | 27585 | 100 | Plus |
| lid-RD | 5517 | CG9088-PD | 1..5517 | 17..5533 | 27585 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:29:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lid-RF | 7004 | CG9088-RF | 246..5763 | 17..5534 | 27590 | 100 | Plus |
| lid-RE | 6941 | CG9088-RE | 246..5763 | 17..5534 | 27590 | 100 | Plus |
| lid-RD | 5841 | CG9088-RD | 124..5641 | 17..5534 | 27590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:29:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5990641..5992408 | 5534..3767 | 8840 | 100 | Minus |
| 2L | 23513712 | 2L | 5995028..5996490 | 1479..17 | 7315 | 100 | Minus |
| 2L | 23513712 | 2L | 5993470..5994888 | 2895..1477 | 7095 | 100 | Minus |
| 2L | 23513712 | 2L | 5992469..5993347 | 3770..2892 | 4395 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 16:29:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6688..6864 | 5012..5177 | 166 | 59.6 | Plus |
BS11022.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:13:50 Download gff for
BS11022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-RB | 110..5631 | 10..5534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:48 Download gff for
BS11022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-RC | 134..5650 | 17..5533 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:10:29 Download gff for
BS11022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-RB | 114..5630 | 17..5533 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:19:45 Download gff for
BS11022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-RD | 124..5640 | 17..5533 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:19:45 Download gff for
BS11022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5990642..5992405 | 3770..5533 | 100 | <- | Minus |
| 2L | 5992470..5993345 | 2894..3769 | 100 | <- | Minus |
| 2L | 5993472..5994886 | 1479..2893 | 100 | <- | Minus |
| 2L | 5995029..5996490 | 17..1478 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:48 Download gff for
BS11022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5990642..5992405 | 3770..5533 | 100 | <- | Minus |
| arm_2L | 5992470..5993345 | 2894..3769 | 100 | <- | Minus |
| arm_2L | 5993472..5994886 | 1479..2893 | 100 | <- | Minus |
| arm_2L | 5995029..5996490 | 17..1478 | 100 | | Minus |
BS11022.pep Sequence
Translation from 16 to 5532
> BS11022.pep
MSAKTEADNTTAANSGGGGVGSGTSSGGGASANGTATPARRLRTRNSTGN
GTNSGSESVKKSNANDEPSTPVTPAGATGSHTHAPPGISPAVMERPMPSV
PMNHASSSVSASKKYHNSCPHPTPTPAPTGHKKSVHTQPHSSNKFDQGKN
EEFHFDTPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWS
PPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIP
MVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATL
KAHYERILHPFEVYTSGKVLGPTPTSSGSGSTPVKLEDGGGTDYKAHEIP
TRQQIAPPNETNTRRSKRFGNSNASCGLSGVTPTTKPSAGVFVKTETKEE
FKRDLLSSFNAVNSGGSPLATGTTANTRGASQKKGGEPPALIVDPLMKYI
CHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEV
SKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFW
RIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLN
NLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLH
WGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILM
NNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGR
ECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTE
KKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKL
IVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRC
RDIVDAHTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAAAVEAEKCVT
VIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASV
RELLVLGKQFVERSESQLQLSLESLEESELETLINEGSSLRIELQQLDLL
QKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLHIAAADLDPTDPYVDKEM
RKLQQIGADIEAWESQAAKYFRRLTQQHELGEIEQFLKSASDINGQVPSH
GLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLNIPIQLEELS
RMQGHLNSAHQWKDNTACAFLKKGTFYTLLEVLMPRSDAINIDSDLKPRF
QDDFLKEKNPAEIVASFKHAEEQELLDMRELRRQNMNKNPMRDMFCLCKS
EFRNLMFNCQLCRDWFHEDCVPPPSATNQNGIVNGGSGPGTNRPKWLCPS
CVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKAL
SSPDVSAAQEAIMAQQQQKRRSEGGAGVGNISSPRKPRRRGSLTKEASGS
TESDADDDDDEDECRLRIVEDNFSNDEDEPRTAPATSTVNSDLLKLLSDS
EIENLLDLMMEGDLLEVSLDETQELWRILETMPPTLLQAEAMERVVQYMQ
RQRQQHTNPLPTSGAEDSNDSLMVQNSPNSNSNSGGATGSASNSGRNKKR
RSNDTGGNSAVPRKKQSTPKQTPGKKGSAAAARKSDAKASPAASTTPGAD
ADAENKQANGGNTNSSTGSGGGNSATTTPTPGSTHKKRKRTSTTATNNNN
NNNNNSTNNSNSSTNLNSNTTSGQGAATGGNNATGGQKKHAQRSQQAAQE
DDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKPDDDY
ICIRCTKTVAIGTQGSGHSMSVASTTTPGKQRAVQSAR*
BS11022.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:29:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lid-PF | 1838 | CG9088-PF | 1..1838 | 1..1838 | 9728 | 100 | Plus |
| lid-PE | 1838 | CG9088-PE | 1..1838 | 1..1838 | 9728 | 100 | Plus |
| lid-PD | 1838 | CG9088-PD | 1..1838 | 1..1838 | 9728 | 100 | Plus |
| lid-PC | 1838 | CG9088-PC | 1..1838 | 1..1838 | 9728 | 100 | Plus |
| lid-PB | 1838 | CG9088-PB | 1..1838 | 1..1838 | 9728 | 100 | Plus |
