Clone Sequence Records
BS11032.3prime Sequence
837 bp (777 high quality bases) assembled on 2006-04-19
> BS11032.3prime
ATGGTCTAGAAAGCTTTCAACGGATGCTCTGTCGGAACACGCTCTGTTTG
CCCTTGCTGGTCGAAACTGCCTTCTTGGACGCCAACGGATCGGGAGCGAA
GCAGTTCCAAAGACGCAGGGTTTCATCAGCTCCGGCGCTGATCACTGTGC
TGCCGTCCGGAGACATGGCCATCTGGAGAACTCGTGACGTGTGTCCAGTC
AAATCGGCTTGCTTCACCATTGTTGGGTATTTCCAAATGGTCAGTTGGTT
GTTAGCAAAACCATGCGCAGAGATCAGCTCCTTGTAGTGGCGAGAAAAGA
GCAGAGAACAGACCTGCGACTTGGAGTCCACGGATTTCATTAAAGTGCCA
TTGTTCACATTCCAGAACTTGATGCAGCGATCGGCGGTGCCGCCTCCAGA
GGCTAGAGTACTTGGTTGCCAGGGACACCAGGCCAAGGCACGCACTGCAG
CTTGATGGTCGTTGAATTTGTGCAAGGGATCGGTGGCAGTTCCCACGCCA
CCGCTGGCCGCCGACCAAACATTCACCAGATTGTCGTTGCCTCCGCTAGC
CAAATACTTGAAATCCGTGGACCACTTTAGGCCGCAAACCTCCTGCGTGT
GTCCGGACAATGTGGAAAGCTTGTGCTCACGTGCACGCACATCGTGGTGG
ACAATGGTGCCATCCCGGCTGCCAGAGGAAACCAGGAATGAGTTCCAGGC
CAAGGATCCCACTCGGGCACTGTGTCCATCCATCACTCGCAGACGCTTCA
CTTTGGAGCAGTCCCACAGCTCCACGGCACCGGTGCTGTTGCCGATGGCA
AGTATCTGCCCCTCCTGAATCCACGATAGCGAACCTG
BS11032.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:00:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4274-PA | 1581 | fzy-RA | 766..1581 | 832..17 | 4055 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:56:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzy-RA | 1996 | CG4274-RA | 906..1726 | 837..17 | 4075 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:56:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16312007..16312827 | 837..17 | 4075 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-01-30 16:56:12 has no hits.
BS11032.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:56:40 Download gff for
BS11032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzy-PA | 761..1581 | 17..837 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:23:24 Download gff for
BS11032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4274-PA | 761..1581 | 17..837 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 19:00:06 Download gff for
BS11032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzy-RA | 906..1732 | 12..837 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:24:20 Download gff for
BS11032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzy-RA | 906..1732 | 12..837 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 19:24:20 Download gff for
BS11032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16312007..16312833 | 12..837 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 19:00:06 Download gff for
BS11032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16312007..16312833 | 12..837 | 99 | | Minus |
BS11032.5prime Sequence
859 bp (762 high quality bases) assembled on 2006-04-19
> BS11032.5prime
GAAGTTATCACTCTACATGTCGCAGTTCAATTTTGTGAGCGATTTGCAGA
ATGCTCTCATCATGGACGGCGAGACGCGCGGACCTGCGCCCAGGTGGAAG
AAGAAGCTGGAGGCGTCTCTAAATGGAAGTGTGAATACCACTCGGTCGGT
GCTATCCGTCTCGTACAACACCAGTTTCTCGGGTGTCCAGGCGCCCACGA
AAACTCCGGGCAAGAGCAGCGAGGGCAAGACCAAGAAGTCCAACACCACG
CCCTCTAAGACGCCAGGAGGCGGAGATCGCTTTATTCCGAATCGGGCGGC
TACCAACTTTGAGTTAGCACACTTTCTGGTGAACAAAGACTCCGGCGATA
AGTCCGATGAGGAGAACGACAAGGCCACCTCGAGCAACAGCAACGAGAGC
AATGTCCAGGCTTCGGCTCACAAGGGCGACCGGCAGAAACTCATCTCTGA
AGTGGCCCAGGTCGGTGACTCCAAGGGCGGGCGCATTTTGTGCTACCAAA
ACAAGGCTCCCGCTGCTCCAGAAACACACAACAATCCCCTGAAGGTCGTG
TACTCCATTAAGACACCCATATCCACAAAGAGTGGCTCACGCTATATACC
CACCACATCCGAGAGGATTCTGGATGCACCTGATTTTATTAACGATTACT
ATTTAAATCTTATGGATTGGAGTGCCGACAATATAGTGGCTGTGGCCTTG
GGCAGTTGCGTCTATTTGTGGAACGCACAGACCGGAAATATCGAGCAGCT
TACGGAGTTTGAGGAGGGCGACTACGCAGGCTCGCTATCGTGGATCCAGG
AGGGGCAGATACTTGCCATCGGCAACAGCACCGGTGCCGTGGAGCTGTGG
GACTGCTCC
BS11032.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:00:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4274-PA | 1581 | fzy-RA | 1..843 | 17..859 | 4215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:26:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzy-RA | 1996 | CG4274-RA | 146..988 | 17..859 | 4215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:26:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16311505..16311827 | 328..650 | 1615 | 100 | Plus |
| 2L | 23513712 | 2L | 16311101..16311414 | 17..330 | 1570 | 100 | Plus |
| 2L | 23513712 | 2L | 16311881..16312089 | 651..859 | 1045 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:26:13 has no hits.
BS11032.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:56:41 Download gff for
BS11032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzy-PA | 1..843 | 17..859 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:23:25 Download gff for
BS11032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4274-PA | 1..843 | 17..859 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 03:05:34 Download gff for
BS11032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzy-RA | 141..988 | 10..859 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:29:04 Download gff for
BS11032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzy-RA | 141..988 | 10..859 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:29:04 Download gff for
BS11032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16311096..16311412 | 10..328 | 99 | -> | Plus |
| 2L | 16311506..16311827 | 329..650 | 100 | -> | Plus |
| 2L | 16311881..16312089 | 651..859 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 03:05:34 Download gff for
BS11032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16311096..16311412 | 10..328 | 99 | -> | Plus |
| arm_2L | 16311506..16311827 | 329..650 | 100 | -> | Plus |
| arm_2L | 16311881..16312089 | 651..859 | 100 | | Plus |
BS11032.complete Sequence
1613 bp assembled on 2009-02-12
> BS11032.complete
GAAGTTATCACTCTACATGTCGCAGTTCAATTTTGTGAGCGATTTGCAGA
ATGCTCTCATCATGGACGGCGAGACGCGCGGACCTGCGCCCAGGTGGAAG
AAGAAGCTGGAGGCGTCTCTAAATGGAAGTGTGAATACCACTCGGTCGGT
GCTATCCGTCTCGTACAACACCAGTTTCTCGGGTGTCCAGGCGCCCACGA
AAACTCCGGGCAAGAGCAGCGAGGGCAAGACCAAGAAGTCCAACACCACG
CCCTCTAAGACGCCAGGAGGCGGAGATCGCTTTATTCCGAATCGGGCGGC
TACCAACTTTGAGTTAGCACACTTTCTGGTGAACAAAGACTCCGGCGATA
AGTCCGATGAGGAGAACGACAAGGCCACCTCGAGCAACAGCAACGAGAGC
AATGTCCAGGCTTCGGCTCACAAGGGCGACCGGCAGAAACTCATCTCTGA
AGTGGCCCAGGTCGGTGACTCCAAGGGCGGGCGCATTTTGTGCTACCAAA
ACAAGGCTCCCGCTGCTCCAGAAACACACAACAATCCCCTGAAGGTCGTG
TACTCCATTAAGACACCCATATCCACAAAGAGTGGCTCACGCTATATACC
CACCACATCCGAGAGGATTCTGGATGCACCTGATTTTATTAACGATTACT
ATTTAAATCTTATGGATTGGAGTGCCGACAATATAGTGGCTGTGGCCTTG
GGCAGTTGCGTCTATTTGTGGAACGCACAGACCGGAAATATCGAGCAGCT
TACGGAGTTTGAGGAGGGCGACTACGCAGGCTCGCTATCGTGGATCCAGG
AGGGGCAGATACTTGCCATCGGCAACAGCACCGGTGCCGTGGAGCTGTGG
GACTGCTCCAAAGTGAAGCGTCTGCGAGTGATGGATGGACACAGTGCCCG
AGTGGGATCCTTGGCCTGGAACTCATTCCTGGTTTCCTCTGGCAGCCGGG
ATGGCACCATTGTCCACCACGATGTGCGTGCACGTGAGCACAAGCTTTCC
ACATTGTCCGGACACACGCAGGAGGTTTGCGGCCTAAAGTGGTCCACGGA
TTTCAAGTATTTGGCTAGCGGAGGCAACGACAATCTGGTGAATGTTTGGT
CGGCGGCCAGCGGTGGCGTGGGAACTGCCACCGATCCCTTGCACAAATTC
AACGACCATCAAGCTGCAGTGCGTGCCTTGGCCTGGTGTCCCTGGCAACC
AAGTACTCTAGCCTCTGGAGGCGGCACCGCCGATCGCTGCATCAAGTTCT
GGAATGTGAACAATGGCACTTTAATGAAATCCGTGGACTCCAAGTCGCAG
GTCTGTTCTCTGCTCTTTTCTCGCCACTACAAGGAGCTGATCTCTGCGCA
TGGTTTTGCTAACAACCAACTGACCATTTGGAAATACCCAACAATGGTGA
AGCAAGCCGATTTGACTGGACACACGTCACGAGTTCTCCAGATGGCCATG
TCTCCGGACGGCAGCACAGTGATCAGCGCCGGAGCTGATGAAACCCTGCG
TCTTTGGAACTGCTTCGCTCCCGATCCGTTGGCGTCCAAGAAGGCAGTTT
CGACCAGCAAGGGCAAACAGAGCGTGTTCCGACAGAGCATCCGTTGAAAG
CTTTCTAGACCAT
BS11032.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:41:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzy-RA | 1581 | CG4274-PA | 1..1581 | 17..1597 | 7905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:41:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzy-RA | 1996 | CG4274-RA | 146..1726 | 17..1597 | 7905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:41:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16311881..16312827 | 651..1597 | 4735 | 100 | Plus |
| 2L | 23513712 | 2L | 16311505..16311827 | 328..650 | 1615 | 100 | Plus |
| 2L | 23513712 | 2L | 16311101..16311414 | 17..330 | 1570 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:41:13 has no hits.
BS11032.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-12 18:08:27 Download gff for
BS11032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzy-RA | 173..1752 | 17..1596 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:25 Download gff for
BS11032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzy-RA | 146..1725 | 17..1596 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:16:46 Download gff for
BS11032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzy-RA | 146..1725 | 17..1596 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:16:46 Download gff for
BS11032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16311101..16311412 | 17..328 | 100 | -> | Plus |
| 2L | 16311506..16311827 | 329..650 | 100 | -> | Plus |
| 2L | 16311881..16312826 | 651..1596 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:25 Download gff for
BS11032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16311101..16311412 | 17..328 | 100 | -> | Plus |
| arm_2L | 16311506..16311827 | 329..650 | 100 | -> | Plus |
| arm_2L | 16311881..16312826 | 651..1596 | 100 | | Plus |
BS11032.pep Sequence
Translation from 16 to 1596
> BS11032.pep
MSQFNFVSDLQNALIMDGETRGPAPRWKKKLEASLNGSVNTTRSVLSVSY
NTSFSGVQAPTKTPGKSSEGKTKKSNTTPSKTPGGGDRFIPNRAATNFEL
AHFLVNKDSGDKSDEENDKATSSNSNESNVQASAHKGDRQKLISEVAQVG
DSKGGRILCYQNKAPAAPETHNNPLKVVYSIKTPISTKSGSRYIPTTSER
ILDAPDFINDYYLNLMDWSADNIVAVALGSCVYLWNAQTGNIEQLTEFEE
GDYAGSLSWIQEGQILAIGNSTGAVELWDCSKVKRLRVMDGHSARVGSLA
WNSFLVSSGSRDGTIVHHDVRAREHKLSTLSGHTQEVCGLKWSTDFKYLA
SGGNDNLVNVWSAASGGVGTATDPLHKFNDHQAAVRALAWCPWQPSTLAS
GGGTADRCIKFWNVNNGTLMKSVDSKSQVCSLLFSRHYKELISAHGFANN
QLTIWKYPTMVKQADLTGHTSRVLQMAMSPDGSTVISAGADETLRLWNCF
APDPLASKKAVSTSKGKQSVFRQSIR*
BS11032.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:58:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzy-PA | 526 | CG4274-PA | 1..526 | 1..526 | 2761 | 100 | Plus |
| rap-PA | 478 | CG3000-PA | 23..459 | 75..501 | 874 | 41.3 | Plus |
| rap-PB | 478 | CG3000-PB | 23..459 | 75..501 | 874 | 41.3 | Plus |
| fzr2-PA | 451 | CG16783-PA | 123..439 | 188..508 | 733 | 42.4 | Plus |
| wds-PB | 361 | CG17437-PB | 96..357 | 232..497 | 206 | 26.2 | Plus |
