Clone BS11044 Report

Search the DGRC for BS11044

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:110
Well:44
Vector:pDNR-Dual
Associated Gene/Transcripta-RA
Protein status:BS11044.pep: full length peptide match
Sequenced Size:4022

Clone Sequence Records

BS11044.complete Sequence

4022 bp assembled on 2009-12-07

GenBank Submission: KX800878

> BS11044.complete
GAAGTTATCAGTCGACATGCGTCTCTTCAAAACGCGCAAATCCACGGATA
CCTACAGCACACTAGCCGCGCAGCAACAGCAACAGCAGCAGCAGCAACAA
CAACATCAAGCGGAAGGCAGCAACATTTCCCACAGCAGCAACAGCAGCAG
CAACAAGAGTCACACACCGGCAACATGCAGCAACAGACTGAACAAGAGCA
TTGTGAGCAGCACCAGCATATCGTCATCGCTGCCTGATCTGCATGACAAG
TCGCCCGTCATGATCCTCAGCTGCACCACCCTGGCCAGCAATGGAGCCAC
CGCCACGGCAGCGGTCACAGCAACAGCCACCGGCACAGCAGCAACATCTG
GCGGCTCGCTGCAGCAGCAACAACAGCAGCATCTGCAACACCAGCAGCAG
CAGCAGCCGTTACGCACGGCCACGCCCACGTGTCTGCTGAGTGGCCGTCA
GACGCCATCGGCCATATCGGTGATGTCGCTCCAAGAGGCCACCAGTCTGC
ACCGCCAGCAACAGCAGCCACACCAGCCACCCACCATCTACGTGCCGGTG
CCTACGAAACTTGGCAACAATGTCAACACTGGCAACAGCTCGGCCACTCT
GCTGCTCAGCTATGGCAGCACCAGCAGCATCGCCAACCTGCAACAGCAGC
AGCAGCAGCATGCCGCCCAGTACCAGCAGTATGTTGCACAGCGGCTGCAC
GCCGCTTCCAGCAGTTGTTTGTACGAGAAGGGGTCGAATGCCAGCGGTGG
GGCGAGCAGCAACAAAAGCAGTCTATCCCTGACCCCAAATGGTCACTTGC
CCGACTACAAGTTGGTGACAGCGATGCCAGTTGTTGTCCTGGACGATGAA
CACAAATCCAATTCATTGCCGGCCACTGAAGCGAGTCGCAACAGCAACAG
CAGCAGCAACATGAACGGCAGCAGCAACAGCAACAGCCTTGACGTCAGCA
ACAGCAACTCGCATTCGGGGAGCTCCACTTCTTTGGCCAGCACCACGAGA
AATGTTTTCACCTGGGGCAAGCGCATGAGTCGCAAACTGGATTTGCTGAA
GCGGAGTGACTCGCCCGCCGCCGCCCACAAATCGCATTCGGATTTGAGGA
GTCTGTTCCACTCGCCAACGCACCACAAGAGTGGATCCGGTGGATCCAGC
GGACCCAGTTCGGCGAAGGCATCGGCCTCACCCACTGGCGGCCATCAGAA
CAGCTCCGGCTCCACGACCAGCACCCTCAAGAAGTGCAAGTCGGGGCCCA
TCGAGACCATCAAGCAGCGACACCAGCAGCAGCAGCAGCAGCAGCAATCG
GTTCAGGATGTGGGCACGGGACAGAGCCAGAGTGCTCAGTCCACGCCCAC
GCATCAGTTCCAGGCGGCCGCCCGCCCACAGAAAGCGCTAAAGAACTTCT
TCCATAGGATCGGGTCCACCGGCATGCTGAACCATCGCTCCCACAATCTC
CTTAAGGCTTCGGAGGCGGCTCAACAGGCCACCCCGGCAGCCACCACATT
GTATAGGAGCAGCTCCACTAGCCAGCTGTCCAGCAGCTCCTATGTGAAGT
GCGACGATCCCACCGAGGGACTGAATCTTCAGAGGGAGCAGCGGGAACAG
CGTCTTCCGCGGATCGCCAGCCTGAAGTCCAGTAGCTGCGATGACATAGC
CAAGGTGAGCAGTTGCCTGACGGCCAGCACAAGTAGTGGCAGTGCCGCAG
GCAGCTTGGGCTCTCCTCCAAGTAGTGCAGCAGCTGGTGGAGGCGGAACT
GCAAACAGCGGCCAACACGATCCCTCGCGTCGTGGTGCATTTCCTTACGC
CTTCCTGCGATCACGTCTCTCCGTTTTGCCAGAGGAGAACCACGGAAATG
TACCAGGACACCTGAAGCAACAAATACAGCGGCAACGGGAGCAGCACCAG
CAGCATCAGAGGGATCTCCTCCAGCAGGAGCAGACATCGTCGCCCCTTCC
CCAGCGCCGATCCCCCGAACAGGCGATGCTGAACAATGTGTCACGCAACG
ACAGCATCACCTCCAAGGACTGGGAACCACTTTACCAAAGATTAAGTAGT
TGTCTAAGTTCAAACGAGTCCGGCTACGACAGCGATGGGGGTGCGACGGG
AGCCCGACTGGGCAATAATCTGAGCATCTCCGGCGGAGATACCGAATCTA
TTGCCTCGGGCACACTCAAGCGTAACTCGCTCATCTCCCTCAGCTCCTCG
GAGGGCGTTGGAATGGGCATGGGCATGAGTCTGGGACTGGGTGCCCCATC
GACGAGGAACAGCAGCATCTGCAGTGCTCCCGTGTCGCTGGGTGGCTATA
ACTACGACTATGAGACGGAGACGATACGGCGACGATTCAGGCAGGTTAAG
CTGGAGCGCAAGTGCCAAGAGGACTACATCGGAATTGTCCTGTCGCCCAA
AACGGTGATGACCAATAGCAATGAGCAGCAGTACAGGTATCTCATCGTGG
AACTGGAACCCTATGGCATGGCCCAAAAGGATGGTCGCCTTCGCCTGGGT
GACGAGATCGTCAACGTAAATGGAAAACACCTGCGAGGCATTCAATCCTT
TGCAGAGGTTCAGCGCCTGTTGAGCAGCTTTGTGGACAACTGTATCGACC
TGGTGATTGCTCACGATGAGGTGACGACGGTAACTGATTTCTACACCAAA
ATCCGTATCGATGGGATGAGCACGCAGCGCCATCGGCTGAGTTATGTGCA
ACGCACACAGAGCACAGACAGTCTGAGCAGCATGCAGAGTCTGCAGCTGC
AGCAGGAGAGGATTCAGGGTCACAATACGGAACAGGAGCAGGAGGCCCAG
GGCGAGGATCAGTGCGATGCGCGTTCAATGGCCAGCGTCAGCACAATGCC
CACTCCGATGCCGCTGATGCAGCATCGTCGGAGCTCCACGCCCAGGCACT
CACTGGACGTCGGTGCGCCGGAGCATGAGCTCCTCAGGAGGCGGGCGCGC
AGCTCCTCAGGTCAGCGCAGCTTGGCTCTAACACCGACCCCACTCTTTGC
CAGCGGCAGCAGCAGTTGCTCCTCCTCCCCTAACCACCGGTTGCTGGATA
ACGAGAACGACCCTGCTAACGACACCGATTCCTATACGCCAGTGTATGCA
AATCGGGCGGCAAGCGTGTGCGTGGCCTCCTCCCTGGCGGACGATGAGAA
GTGGCAGTTACTGGCCCGAAAGCGCTGCTCGGAGGGTTCCGCCCTATCCG
CTACACCGAACCCGCAGCAATTTGGCCAGCGCACTCACTACGCCAGAAAC
TCCATCAATCTGGCCAACTCGCATTACCGCTCGCTCCGATTTGCCCACTC
GCGGCTGAGTTCGTCTCGCCTTAGTCTGTTCATGCAGGCACCGCCTAACA
GTCTAACCGTCGGAGAAGGAGTCGCTAACACCCCATCCTCTACAGCTACC
ACAACCACTGATCTCACTAACCAGCAGCAACAGCAGCAAAACCAGCAACA
GACACACCAATCACTGTACATCAAGCACTCGCCAAAGAGCGTCTCATTGT
TCTCGCCTAATCCCTATGTTAACGCCTCATCCTCACCAGCTTCGGCATCC
ACATCAGCGGGTGCCGGCTCCTCCCTGGCACCGCCAGCCGCTGCCCTAAT
GCATCACAGGCCATCGCTTCCGGTGGCCAAGCTAACAATACGCGACGAGG
AAATGGCGGAGGTCATCCGTGCGTCGATGAGCGAGGGTAGTGGACGTTGC
ACCCCGAAGACTATAACCTTCTTTAAGGGACCTGGACTGAAATCGTTGGG
CTTCAGCATAGTGGGAGGTCGAGATTCGCCAAAGGGCAACATGGGAATTT
TTGTAAAGACCGTGTTTCCCTCAGGCCAGGCAGCCGATGATGGCACACTG
CAAGCGGGCGACGAGATTGTAGAGATCAATGGAAACTCTGTGCAGGGCAT
GAGTCATGCCGAAACCATAGGACTCTTTAAGAACGTAAGAGAGGGCACCA
TTGTGCTAAAAATCTTAAGAAGAAAATTACAGAAAGCTAAATCGATGGGT
TGCTAGAAGCTTTCTAGACCAT

BS11044.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:23:25
Subject Length Description Subject Range Query Range Score Percent Strand
a-RA 3990 CG6741-PA 1..3990 17..4006 19950 100 Plus
a-RC 3990 CG6741-PC 1..3990 17..4006 19950 100 Plus
a-RB 3990 CG6741-PB 1..3990 17..4006 19950 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:27
Subject Length Description Subject Range Query Range Score Percent Strand
a-RA 4847 CG6741-RA 551..4540 17..4006 19950 100 Plus
a-RC 4665 CG6741-RC 369..4358 17..4006 19950 100 Plus
a-RB 5173 CG6741-RB 877..4866 17..4006 19950 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22169243..22170718 1004..2479 7380 100 Plus
2R 25286936 2R 22170778..22171987 2479..3688 6050 100 Plus
2R 25286936 2R 22162920..22163696 17..793 3885 100 Plus
2R 25286936 2R 22164776..22164989 791..1004 1070 100 Plus
2R 25286936 2R 22172081..22172253 3686..3858 865 100 Plus
2R 25286936 2R 22172303..22172433 3845..3975 610 97.7 Plus
2L 23513712 2L 14062188..14062238 16..66 195 92.2 Plus
Blast to na_te.dros performed 2014-11-28 02:23:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2186..2469 131..413 218 59.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2335..2402 1866..1933 160 70.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6828 3362..3450 140 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2316..2390 3415..3487 135 69.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6826..6900 1852..1926 132 64 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6848 3370..3490 131 59.5 Plus
roo 9092 roo DM_ROO 9092bp 1048..1161 3366..3473 130 64.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2321..2409 3380..3478 129 65.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6740..6820 3393..3474 127 66.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2903..2971 1836..1905 122 65.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6808 3375..3474 121 62.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6836..6920 3393..3478 121 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2785..2844 3423..3482 120 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1521..1591 3384..3453 118 66.7 Plus

BS11044.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:11 Download gff for BS11044.complete
Subject Subject Range Query Range Percent Splice Strand
a-RA 528..4517 17..4006 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:03 Download gff for BS11044.complete
Subject Subject Range Query Range Percent Splice Strand
a-RB 877..4866 17..4006 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:04:09 Download gff for BS11044.complete
Subject Subject Range Query Range Percent Splice Strand
a-RA 528..4517 17..4006 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:10:24 Download gff for BS11044.complete
Subject Subject Range Query Range Percent Splice Strand
a-RB 877..4866 17..4006 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:10:24 Download gff for BS11044.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22172316..22172433 3858..3975 100 -> Plus
2R 22172497..22172527 3976..4006 100   Plus
2R 22172082..22172252 3687..3857 100 -> Plus
2R 22162920..22163694 17..791 100 -> Plus
2R 22164777..22164989 792..1004 100 -> Plus
2R 22169244..22170717 1005..2478 100 -> Plus
2R 22170778..22171985 2479..3686 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:03 Download gff for BS11044.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18050425..18051199 17..791 100 -> Plus
arm_2R 18052282..18052494 792..1004 100 -> Plus
arm_2R 18056749..18058222 1005..2478 100 -> Plus
arm_2R 18058283..18059490 2479..3686 100 -> Plus
arm_2R 18059587..18059757 3687..3857 100 -> Plus
arm_2R 18059821..18059938 3858..3975 100 -> Plus
arm_2R 18060002..18060032 3976..4006 100   Plus

BS11044.3prime Sequence

833 bp (776 high quality bases) assembled on 2006-04-19

> BS11044.3prime
ATGGTCTAGAAAGCTTCTAGCAACCCATCGATTTAGCTTTCTGTAATTTT
CTTCTTAAGATTTTTAGCACAATGGTGCCCTCTCTTACGTTCTTAAAGAG
TCCTATGGTTTCGGCATGACTCATGCCCTGCACAGAGTTTCCATTGATCT
CTACAATCTCGTCGCCCGCTTGCAGTGTGCCATCATCGGCTGCCTGGCCT
GAGGGAAACACGGTCTTTACAAAAATTCCCATGTTGCCCTTTGGCGAATC
TCGACCTCCCACTATGCTGAAGCCCAACGATTTCAGTCCAGGTCCCTTAA
AGAAGGTTATAGTCTTCGGGGTGCAACGTCCACTACCCTCGCTCATCGAC
GCACGGATGACCTCCGCCATTTCCTCGTCGCGTATTGTTAGCTTGGCCAC
CGGAAGCGATGGCCTGTGATGCATTAGGGCAGCGGCTGGCGGTGCCAGGG
AGGAGCCGGCACCCGCTGATGTGGATGCCGAAGCTGGTGAGGATGAGGCG
TTAACATAGGGATTAGGCGAGAACAATGAGACGCTCTTTGGCGAGTGCTT
GATGTACAGTGATTGGTGTGTCTGTTGCTGGTTTTGCTGCTGTTGCTGCT
GGTTAGTGAGATCAGTGGTTGTGGTAGCTGTAGAGGATGGGGTGTTAGCG
ACTCCTTCTCCGACGGTTAGACTGTTAGGCGGTGCCTGCATGAACAGACT
AAGGCGAGACGAACTCAGCCGCGAGTGGGCAAATCGGAGCGAGCGGTAAT
GCGAGTTGGCCAGATTGATGGAGTTTCTGGCGTAGTGAGTGCGCTGGCCA
AATTGCTGCGGGTTCGGTGTAGCGGATAGGGCG

BS11044.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:01:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG6741-PB 3990 a-RB 3174..3990 833..17 4085 100 Minus
CG6741-PC 3990 a-RC 3174..3990 833..17 4085 100 Minus
CG6741-PA 3990 a-RA 3174..3990 833..17 4085 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
a-RA 4847 CG6741-RA 3724..4540 833..17 4085 100 Minus
a-RC 4665 CG6741-RC 3542..4358 833..17 4085 100 Minus
a-RB 5173 CG6741-RB 4050..4866 833..17 4085 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:46:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22171489..22171987 833..335 2495 100 Minus
2R 25286936 2R 22172081..22172253 337..165 865 100 Minus
2R 25286936 2R 22172303..22172433 178..48 610 97.7 Minus
Blast to na_te.dros performed 2015-02-12 18:46:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6828 661..573 140 64.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2316..2390 608..536 135 69.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6848 653..533 131 59.5 Minus
roo 9092 roo DM_ROO 9092bp 1048..1161 657..550 130 64.3 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2321..2409 643..545 129 65.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6740..6820 630..549 127 66.3 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6808 648..549 121 62.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6836..6920 630..545 121 63.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2785..2844 600..541 120 66.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1521..1591 639..570 118 66.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6787 603..549 117 73.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6831..6871 603..563 115 75.6 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 5638..5695 612..558 112 69 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6756 603..564 112 80 Minus
roo 9092 roo DM_ROO 9092bp 1029..1151 660..545 112 58.5 Minus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3203..3323 677..563 112 59.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2375..2407 605..573 111 81.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2371..2410 603..564 110 75 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2638..2696 603..547 110 67.8 Minus
roo 9092 roo DM_ROO 9092bp 1125..1158 603..569 109 82.9 Minus

BS11044.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:57:01 Download gff for BS11044.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6741-PA 3174..3990 17..833 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:23:50 Download gff for BS11044.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6741-PA 3174..3990 17..833 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:22:13 Download gff for BS11044.3prime
Subject Subject Range Query Range Percent Splice Strand
a-RB 4050..4870 12..833 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:24:38 Download gff for BS11044.3prime
Subject Subject Range Query Range Percent Splice Strand
a-RB 4050..4870 12..833 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:24:38 Download gff for BS11044.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 22171489..22171985 337..833 100 -> Minus
2R 22172082..22172252 166..336 100 -> Minus
2R 22172316..22172433 48..165 100 -> Minus
2R 22172497..22172531 12..47 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:22:13 Download gff for BS11044.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18058994..18059490 337..833 100 -> Minus
arm_2R 18059587..18059757 166..336 100 -> Minus
arm_2R 18059821..18059938 48..165 100 -> Minus
arm_2R 18060002..18060036 12..47 94   Minus

BS11044.5prime Sequence

917 bp (797 high quality bases) assembled on 2006-04-19

> BS11044.5prime
GAAGTTATCAGTCGACATGCGTCTCTTCAAAACGCGCAAATCCACGGATA
CCTACAGCACACTAGCCGCGCAGCAACAGCAACAGCAGCAGCAGCAACAA
CAACATCAAGCGGAAGGCAGCAACATTTCCCACAGCAGCAACAGCAGCAG
CAACAAGAGTCACACACCGGCAACATGCAGCAACAGACTGAACAAGAGCA
TTGTGAGCAGCACCAGCATATCGTCATCGCTGCCTGATCTGCATGACAAG
TCGCCCGTCATGATCCTCAGCTGCACCACCCTGGCCAGCAATGGAGCCAC
CGCCACGGCAGCGGTCACAGCAACAGCCACCGGCACAGCAGCAACATCTG
GCGGCTCGCTGCAGCAGCAACAACAGCAGCATCTGCAACACCAGCAGCAG
CAGCAGCCGTTACGCACGGCCACGCCCACGTGTCTGCTGAGTGGCCGTCA
GACGCCATCGGCCATATCGGTGATGTCGCTCCAAGAGGCCACCAGTCTGC
ACCGCCAGCAACAGCAGCCACACCAGCCACCCACCATCTACGTGCCGGTG
CCTACGAAACTTGGCAACAATGTCAACACTGGCAACAGCTCGGCCACTCT
GCTGCTCAGCTATGGCAGCACCAGCAGCATCGCCAACCTGCAACAGCAGC
AGCAGCAGCATGCCGCCCAGTACCAGCAGTATGTTGCACAGCGGCTGCAC
GCCGCTTCCAGCAGTTGTTTGTACGAGAAGGGGTCGAATGCCAGCGGTGG
GGCGAGCAGCAACAAAAGCAGTCTATCCCTGACCCCAAATGGTCACTTGC
CCGACTACAAGTTGGTGACAGCGATGCCAGTTGTTGTCCTGGACGATGAA
CACAAATCAATTCATTGCCGGCCACTGAAGCGAGTCGCAACAGCAACAGC
AGCAGCAACATGAACGG

BS11044.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:01:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG6741-PB 3990 a-RB 1..842 17..858 4210 100 Plus
CG6741-PC 3990 a-RC 1..842 17..858 4210 100 Plus
CG6741-PA 3990 a-RA 1..842 17..858 4210 100 Plus
CG6741-PB 3990 a-RB 843..902 858..917 300 100 Plus
CG6741-PC 3990 a-RC 843..902 858..917 300 100 Plus
CG6741-PA 3990 a-RA 843..902 858..917 300 100 Plus
CG32975-PA 1713 nAcRalpha-34E-RA 492..529 25..62 165 97.3 Plus
CG32975-PC 2361 nAcRalpha-34E-RC 492..529 25..62 165 97.3 Plus
CG32975-PB 2427 nAcRalpha-34E-RB 492..529 25..62 165 97.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:49:51
Subject Length Description Subject Range Query Range Score Percent Strand
a-RD 3897 CG6741-RD 327..1228 17..917 4485 99.9 Plus
a-RA 4847 CG6741-RA 551..1452 17..917 4485 99.9 Plus
a-RC 4665 CG6741-RC 369..1270 17..917 4485 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:49:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22162920..22163696 17..793 3885 100 Plus
2R 25286936 2R 22164776..22164903 791..917 590 99.2 Plus
2L 23513712 2L 14062188..14062238 16..66 195 92.2 Plus
Blast to na_te.dros performed 2015-02-10 20:49:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2186..2469 131..413 218 59.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6437..6569 552..677 205 67.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2268..2459 520..714 174 58.6 Plus
roo 9092 roo DM_ROO 9092bp 1111..1155 871..916 119 76.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2361..2406 869..915 115 74.5 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3284..3311 887..914 113 89.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2291..2340 867..915 112 72 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2368..2402 883..917 112 80 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6752 887..915 109 86.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6765 869..910 108 76.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6821..6861 869..910 108 76.2 Plus

BS11044.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:57:02 Download gff for BS11044.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6741-PA 1..902 17..917 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:23:51 Download gff for BS11044.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6741-PA 1..902 17..917 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 04:01:34 Download gff for BS11044.5prime
Subject Subject Range Query Range Percent Splice Strand
a-RC 363..1270 9..917 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:26:12 Download gff for BS11044.5prime
Subject Subject Range Query Range Percent Splice Strand
a-RC 363..1270 9..917 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:26:12 Download gff for BS11044.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22162914..22163694 9..791 99 -> Plus
2R 22164777..22164903 792..917 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 04:01:34 Download gff for BS11044.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18050419..18051199 9..791 99 -> Plus
arm_2R 18052282..18052408 792..917 99   Plus

BS11044.pep Sequence

Translation from 16 to 4005

> BS11044.pep
MRLFKTRKSTDTYSTLAAQQQQQQQQQQQHQAEGSNISHSSNSSSNKSHT
PATCSNRLNKSIVSSTSISSSLPDLHDKSPVMILSCTTLASNGATATAAV
TATATGTAATSGGSLQQQQQQHLQHQQQQQPLRTATPTCLLSGRQTPSAI
SVMSLQEATSLHRQQQQPHQPPTIYVPVPTKLGNNVNTGNSSATLLLSYG
STSSIANLQQQQQQHAAQYQQYVAQRLHAASSSCLYEKGSNASGGASSNK
SSLSLTPNGHLPDYKLVTAMPVVVLDDEHKSNSLPATEASRNSNSSSNMN
GSSNSNSLDVSNSNSHSGSSTSLASTTRNVFTWGKRMSRKLDLLKRSDSP
AAAHKSHSDLRSLFHSPTHHKSGSGGSSGPSSAKASASPTGGHQNSSGST
TSTLKKCKSGPIETIKQRHQQQQQQQQSVQDVGTGQSQSAQSTPTHQFQA
AARPQKALKNFFHRIGSTGMLNHRSHNLLKASEAAQQATPAATTLYRSSS
TSQLSSSSYVKCDDPTEGLNLQREQREQRLPRIASLKSSSCDDIAKVSSC
LTASTSSGSAAGSLGSPPSSAAAGGGGTANSGQHDPSRRGAFPYAFLRSR
LSVLPEENHGNVPGHLKQQIQRQREQHQQHQRDLLQQEQTSSPLPQRRSP
EQAMLNNVSRNDSITSKDWEPLYQRLSSCLSSNESGYDSDGGATGARLGN
NLSISGGDTESIASGTLKRNSLISLSSSEGVGMGMGMSLGLGAPSTRNSS
ICSAPVSLGGYNYDYETETIRRRFRQVKLERKCQEDYIGIVLSPKTVMTN
SNEQQYRYLIVELEPYGMAQKDGRLRLGDEIVNVNGKHLRGIQSFAEVQR
LLSSFVDNCIDLVIAHDEVTTVTDFYTKIRIDGMSTQRHRLSYVQRTQST
DSLSSMQSLQLQQERIQGHNTEQEQEAQGEDQCDARSMASVSTMPTPMPL
MQHRRSSTPRHSLDVGAPEHELLRRRARSSSGQRSLALTPTPLFASGSSS
CSSSPNHRLLDNENDPANDTDSYTPVYANRAASVCVASSLADDEKWQLLA
RKRCSEGSALSATPNPQQFGQRTHYARNSINLANSHYRSLRFAHSRLSSS
RLSLFMQAPPNSLTVGEGVANTPSSTATTTTDLTNQQQQQQNQQQTHQSL
YIKHSPKSVSLFSPNPYVNASSSPASASTSAGAGSSLAPPAAALMHHRPS
LPVAKLTIRDEEMAEVIRASMSEGSGRCTPKTITFFKGPGLKSLGFSIVG
GRDSPKGNMGIFVKTVFPSGQAADDGTLQAGDEIVEINGNSVQGMSHAET
IGLFKNVREGTIVLKILRRKLQKAKSMGC*

BS11044.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:53:07
Subject Length Description Subject Range Query Range Score Percent Strand
a-PA 1329 CG6741-PA 1..1329 1..1329 6757 100 Plus
a-PC 1329 CG6741-PC 1..1329 1..1329 6757 100 Plus
a-PB 1329 CG6741-PB 1..1329 1..1329 6757 100 Plus
a-PD 1087 CG6741-PD 1..982 1..982 4988 100 Plus
a-PD 1087 CG6741-PD 870..1087 1128..1329 577 59.4 Plus
Spt20-PC 1646 CG17689-PC 1094..1634 19..578 216 23.5 Plus